prot_H-paniculata_contig7836.15861.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7836.15861.1
Unique Nameprot_H-paniculata_contig7836.15861.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length419
Homology
BLAST of mRNA_H-paniculata_contig7836.15861.1 vs. uniprot
Match: D8LI26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI26_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.940e-34
Identity = 121/381 (31.76%), Postives = 169/381 (44.36%), Query Frame = 0
Query:   46 SRAYFRIVHAGNHIPIRGSQFRVKRMQGQDIIAEVMPVPSSSS-SENGRPQQQ--------PTQTNTQWGQYEPEEATGM-NAAGWCRNSLMSATLFEKLAVQTSLGVGILHRMGTTTTTSFTSTPTVAGRDINDTPPHPQPAERSAGVVPLYPAETCIPVSEVEPEQGLMRLGYQLPQRPTEVGMDEAKRAFSRHPHLCNDGIEGEVTPLGSECESEAGGRLVSASCPLAPLRPGDLCDFRAVGAMAVMQAERDAYTWFHASRLSARLLSSVGDIGEHDNHDDNPLSSLSPXXXXXXXXXSLSSSVARGGIEGCFAAGAALRFGVGHEQEGCEGIAHLASAHGDGCPTLSVVPAMQIVSIDNVEYTSSAESCLANVFFCG 416
            S A   +VHAGN I +RGSQFRV  + G DI AEV+PV S  + +  G P               ++ W    P    G+ +AA WC+  + ++T FEKLA+Q++LGVG+L R G     +       A      TP         AGV    PA  C+ V+EV+ ++ +         R      D+ +R              G+    G EC                 +RPGDLCD RA+G MA MQAE+DAY+W   +RLS  +  + GD                          S +++ A     GC  AG   R   G E E CE +  +A+ HG  CPT  +V   Q+VS+DNV  T S    +++V+ CG
Sbjct:  336 SEASLHLVHAGNDIALRGSQFRVASVWGGDI-AEVVPVESKQTEAATGVPTLDGGFAGGCGAGAGDSLW--QRPRWPCGVISAAEWCKQVVSASTRFEKLAIQSALGVGVLQRAGAREGAA-------ALGQAGGTP---------AGVARNLPAHGCLSVTEVKADESISLA------RSGRGEQDDRRR--------------GDGGSAGVECG----------------VRPGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSVLIQGATGD-----------------------REASSATAAAAPVFHGCLTAGTRARCTPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHGVGMSSVYVCG 638          
BLAST of mRNA_H-paniculata_contig7836.15861.1 vs. uniprot
Match: A0A6H5KMN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN4_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 3.620e-31
Identity = 115/386 (29.79%), Postives = 165/386 (42.75%), Query Frame = 0
Query:   46 SRAYFRIVHAGNHIPIRGSQFRVKRMQGQDIIAEVMPVPSSSSSENGRPQQQPTQTNTQWGQY--------------EPEEATGM-NAAGWCRNSLMSATLFEKLAVQTSLGVGILHRMGTTTTTSFTSTPTVAGRDINDTPPHPQPAERSAGVVPLYPAETCIPVSEVEPEQGLMRLGYQLPQRPTEVGMDEAKRAFSRHPHLCNDGIEGEVTPLGSECESEAGGRLVSASCPLAPLRPGDLCDFRAVGAMAVMQAERDAYTWFHASRLSARLLSSVGDIGEHDNHDDNPLSSLSPXXXXXXXXXSLSSSVARGGIEGCFAAGAALRFGVGHEQEGCEGIAHLASAHGDGCPTLSVVPAMQIVSIDNVEYTSSAESCLANVFFCG 416
            S A   +VHAGN I +RGSQFRV  + G DI AEV+P+ S  +       +  T   T  G +               P    G+ +AA WC+  + ++T FEK A+Q++LG+G+L R G     +                   Q     AGV    PA   + V+EV+ ++               + +    R         +D   G+    G    +E G RL            GDLCD RA+G MA MQAE+DAY+W   +RLSA +  + GD                          S +++ A    +GC  AG   R   G E E CE +  +A+ HG  CPT  +V   Q+VS+DNV  T S    +++V+ CG
Sbjct:  224 SEASLHLVHAGNDIALRGSQFRVASVSGGDI-AEVVPLESKQT-------EAATAVPTLDGGFAGGCGAGAGDSLWQRPRWPCGVISAAEWCKQVVSASTRFEKFAMQSALGIGVLQRAGAREGAAALG----------------QAGGAPAGVARNLPAHGYLSVTEVKTDES--------------ISLAHGGRGEQ------DDRRRGD----GGRAAAECGVRL------------GDLCDIRAIGVMAAMQAEQDAYSWLRIARLSALIQGATGD-----------------------REASSATAAAAPVFQGCLTAGTRARCAPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHGVGMSSVYVCG 526          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7836.15861.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI26_ECTSI1.940e-3431.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMN4_9PHAE3.620e-3129.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7836contigH-paniculata_contig7836:1322..4318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7836.15861.1mRNA_H-paniculata_contig7836.15861.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7836 1044..6739 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7836.15861.1 ID=prot_H-paniculata_contig7836.15861.1|Name=mRNA_H-paniculata_contig7836.15861.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=419bp
MLSTLDHQTGDLRVIHAEIVGVILRNSATSTTSNDLLSSAEKTSGSRAYF
RIVHAGNHIPIRGSQFRVKRMQGQDIIAEVMPVPSSSSSENGRPQQQPTQ
TNTQWGQYEPEEATGMNAAGWCRNSLMSATLFEKLAVQTSLGVGILHRMG
TTTTTSFTSTPTVAGRDINDTPPHPQPAERSAGVVPLYPAETCIPVSEVE
PEQGLMRLGYQLPQRPTEVGMDEAKRAFSRHPHLCNDGIEGEVTPLGSEC
ESEAGGRLVSASCPLAPLRPGDLCDFRAVGAMAVMQAERDAYTWFHASRL
SARLLSSVGDIGEHDNHDDNPLSSLSPPPPSSSAATSLSSSVARGGIEGC
FAAGAALRFGVGHEQEGCEGIAHLASAHGDGCPTLSVVPAMQIVSIDNVE
YTSSAESCLANVFFCGEG*
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