prot_H-paniculata_contig7820.15846.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7820.15846.1
Unique Nameprot_H-paniculata_contig7820.15846.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length216
Homology
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: A0A6H5JWZ4_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ4_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 6.330e-34
Identity = 64/80 (80.00%), Postives = 74/80 (92.50%), Query Frame = 0
Query:  136 LGLPKSMVRRIMKLGEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLLFLEAVVPP 215
            +GLP SMVRRIMKLGE+TRNIS EAL++V KASE+FLEKFAA+AFDHAEK GR+ IKY+DVSDVR++D NLLFLEAVVPP
Sbjct:  134 VGLPPSMVRRIMKLGEETRNISKEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRLEDPNLLFLEAVVPP 213          
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: D8LBX1_ECTSI (Histone-like transcription factor family (CBF/NF-Y) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX1_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 5.560e-33
Identity = 63/80 (78.75%), Postives = 73/80 (91.25%), Query Frame = 0
Query:  136 LGLPKSMVRRIMKLGEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLLFLEAVVPP 215
            +GLP SMV+RIMKLGE+TRNIS EAL++V KASE+FLEK AA+AFDHAEK GR+ IKY+DVSDVRV+D NLLFLEAVVPP
Sbjct:  138 VGLPPSMVKRIMKLGEETRNISKEALVIVVKASEIFLEKLAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVPP 217          
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: A0A7S2G0X5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0X5_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 8.130e-17
Identity = 39/89 (43.82%), Postives = 63/89 (70.79%), Query Frame = 0
Query:  126 DSSQQQGAGQLGLPKSMVRRIMKLGEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLLFLEAVVP 214
            D+++     +L +PK+ V+RIMKL +D + +  EA+++V+KA+ELFLE FA  +  HA K  R+ IKY+D+ + RV D+NL FL+ ++P
Sbjct:   41 DATEPGPLKELAIPKNAVKRIMKLEDDVKQVQAEAVLLVAKATELFLESFALDSHKHAVKMERKQIKYEDLLETRVADSNLEFLKHIIP 129          
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: A0A7S2UXP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.430e-15
Identity = 36/77 (46.75%), Postives = 57/77 (74.03%), Query Frame = 0
Query:  138 LPKSMVRRIMKLGEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLLFLEAVVP 214
            LPK+ VRRIMKL ++T+ ++ EA+ +  KA+E+ +EK A  +F+ A+ RG R+I+Y+DV+  R+ D NL FL+ V+P
Sbjct:   65 LPKNAVRRIMKLDQETKTVTQEAVYLAGKATEILVEKLARDSFEQAKTRGGRMIRYEDVAKARIADPNLDFLKDVMP 141          
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: F0Y9H8_AURAN (CBFD_NFYB_HMF domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9H8_AURAN)

HSP 1 Score: 75.1 bits (183), Expect = 2.400e-14
Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = 0
Query:  138 LPKSMVRRIMKLGEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLLFLEAVVP 214
            +PK+ V+RIMKL  +   ++N+A+I+V+KA+E+FLEKF+A+A   A  R R  +KY+D++D    D N  FL  V+P
Sbjct:    4 IPKAAVKRIMKLDPEVNQVANDAVILVAKATEMFLEKFSAEARAQATLRSRTTVKYEDIADTVSGDKNYEFLATVIP 80          
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: A0A7S3JZM4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM4_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.720e-14
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  136 LGLPKSMVRRIMKLGEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLLFLEAVVPP 215
            L +PK  ++RIMK+  D   ++N+A+I+V+KA+ELF+EK    A D A   GR++I Y D+ + R  D+ L F+E ++PP
Sbjct:   62 LTIPKGSIKRIMKIDGDVNQVANDAIILVAKATELFMEKLTKDAHDIATANGRKIINYNDLVNARELDSELHFMEPILPP 141          
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: A0A7S0GIR3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIR3_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.380e-13
Identity = 33/80 (41.25%), Postives = 56/80 (70.00%), Query Frame = 0
Query:  135 QLGLPKSMVRRIMKLGEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLLFLEAVVP 214
            +L LP   ++RIMKL +    I NEA+++ + ASELF++K   ++  HA++RGR +I+Y+DV++ R  + NL FL+ ++P
Sbjct:   29 KLVLPHRAIKRIMKLDKGVGKIQNEAVLLATYASELFVKKLVKESHKHAKQRGRNIIRYEDVAEARAANENLTFLDTLLP 108          
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: W7TNB3_9STRA (Histone-like transcription factor family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNB3_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 5.490e-13
Identity = 33/79 (41.77%), Postives = 55/79 (69.62%), Query Frame = 0
Query:  136 LGLPKSMVRRIMKLGEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLLFLEAVVP 214
            L +P++ ++RIMKL  DT+ +S +A++V++KA+ELF++K A  +   A    R+ IKY+D++D R    N+ FL+ VVP
Sbjct:  118 LAIPRASIKRIMKLDPDTKQLSQDAIMVMAKATELFIDKLAKASHSMAVTNKRKTIKYEDIADARFSQKNMEFLDGVVP 196          
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: A0A7S2RT01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT01_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.760e-12
Identity = 34/83 (40.96%), Postives = 58/83 (69.88%), Query Frame = 0
Query:  133 AGQLGLPKSMVRRIMKLGEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLL-FLEAVVP 214
            A  + +P++ V+RIMKL ED + +  EA+++V+KA+ELFLEKFA  +   +++  R+ +KY+D+ + R+ D N L FL  ++P
Sbjct:   71 ANSVAIPRNAVKRIMKLQEDVKQVQAEAVLLVAKATELFLEKFAKDSHATSQRAERKQLKYEDLLETRLNDENTLAFLTHIIP 153          
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Match: A0A835YPZ2_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ2_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.540e-11
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = 0
Query:  135 QLGLPKSMVRRIMKL-GEDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVRVQDNNLLFLEAVVP 214
            +L  PK  V+ IM+L G+D   ISNEA+ +V KASE FLEK+A   +  A    RR+I+YQD+    +    L+FL  VVP
Sbjct:   63 ELAFPKGKVKSIMRLAGDDIEKISNEAISLVGKASECFLEKYAQDCWTVATDNRRRVIQYQDLRQTHLSSEALVFLRGVVP 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7820.15846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWZ4_9PHAE6.330e-3480.00CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
D8LBX1_ECTSI5.560e-3378.75Histone-like transcription factor family (CBF/NF-Y... [more]
A0A7S2G0X5_9STRA8.130e-1743.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2UXP1_9STRA4.430e-1546.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y9H8_AURAN2.400e-1445.45CBFD_NFYB_HMF domain-containing protein (Fragment)... [more]
A0A7S3JZM4_9STRA7.720e-1442.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0GIR3_9STRA1.380e-1341.25Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
W7TNB3_9STRA5.490e-1341.77Histone-like transcription factor family protein n... [more]
A0A7S2RT01_9STRA1.760e-1240.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YPZ2_9STRA2.540e-1145.68CBFD_NFYB_HMF domain-containing protein n=1 Tax=Tr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 104..214
e-value: 8.4E-20
score: 73.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 112..197
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 138..197
e-value: 9.1E-16
score: 57.9
NoneNo IPR availablePANTHERPTHR10252:SF93DNA POLYMERASE EPSILON SUBUNIT Ccoord: 98..214
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 98..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7820contigH-paniculata_contig7820:2730..7192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7820.15846.1mRNA_H-paniculata_contig7820.15846.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7820 2191..7245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7820.15846.1 ID=prot_H-paniculata_contig7820.15846.1|Name=mRNA_H-paniculata_contig7820.15846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp
MDTTGQSKNPSQPPALSASAPEADTERLPPPIPLEPTSTAAATTEGVTMN
FDDGRGGETGALSPPAIAPASSATVTPSGGGSNSTPSTEKSGNGQTNNDG
RSGTAADKEKDREGGSRPAKRPRQGDSSQQQGAGQLGLPKSMVRRIMKLG
EDTRNISNEALIVVSKASELFLEKFAAQAFDHAEKRGRRLIKYQDVSDVR
VQDNNLLFLEAVVPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain