prot_H-paniculata_contig780.15823.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig780.15823.1
Unique Nameprot_H-paniculata_contig780.15823.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length758
Homology
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: A0A6H5JA94_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA94_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.430e-100
Identity = 203/447 (45.41%), Postives = 257/447 (57.49%), Query Frame = 0
Query:  120 PRLAPSQASTIRHAHSPVSGPAWEALATFMGWREDRARELITFGGFYYKPHGWPDSAKPKRELDPMRPVELGEYFRVFPEPKRYHACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLREARPGLAPLLPHRLDIDTCGLVMVAKTHEILGMINDAIRAPVRAIQVLRDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKAISKTLL-------TVNIPDKAGPNNTSSPSGATQANVGAAVVSGRVTKRYRALVNILPGATPL--SPGPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFP-----SEPTPWLECRMLVLSVRDAE-----EPDG---------------CGRAVLRLQEVEVELLTGRTHQIRGQLAAEGCPIYGDCMYGPARHQQTPHSMESSSRIVPEKTP 532
            PRL       +RHA+SP +GP W ++A F+GW E+ AR LITFGG YYKP G P SAKPKRELDP R VE+GEY R+FP+P+RY A  GVDWES+IVY+   +MLVNKP G+P H TVDNF ENML G+R  RPGL  LLPHRLD DT GLV+VAK  + L  IN+ I+ P   +Q   D      R ++   +       +A      S +          AAA  +++A+ +T         T      AG    ++ +GA Q  VGA      +TKRYRALV +LPG++PL  SP PLTHF + S R+PK F ++RPP  ++     L         +   W+ECR+LVLS  +A       P G                G +   LQEVEV+LLTGRTHQIRGQLAAEGCPIYGD +YGPA  + +P      +    E TP
Sbjct:   63 PRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPASAKPKRELDPDREVEIGEYLRIFPKPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRGVRPGLDLLLPHRLDNDTSGLVIVAKGADTLRSINEIIKRPGLMLQTGDDSPRDRRRKNKALRRAAKLADGTANIKTPVSEEA-----SMTEAAAATESEALPETPQVGRAIPPTQAFATGAGAEAAAAETGAVQNAVGA------ITKRYRALVEVLPGSSPLKASPIPLTHFQKVSRRAPKDFRRDRPPQPKATSNARLADTPGGGEDDEGSWIECRLLVLSASEASVSSVVTPAGFPTRTGDSIKGGXXXXGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDNLYGPAVRETSPTGPAEPAATAAETTP 498          
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: D7G4K2_ECTSI (Putative RNA pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K2_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 3.270e-92
Identity = 199/452 (44.03%), Postives = 252/452 (55.75%), Query Frame = 0
Query:  120 PRLAPSQASTIRHAHSPVSGPAWEALATFMGWREDRARELITFGGFYYKPHGWPDSAKPKRELDPMRPVELGEYFRVFPEPKRYHACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLREARPGLAPLLPHRLDIDTCGLVMV----------------------AKTHEILGMINDAIRAPVRAIQVLRDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKAISKTLLTVNIPDKAGPNNTSSPSGA------TQANVGAAVVS-GRVTKRYRALVNILPGATPL--SPGPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFPSEPTP---------WLECRMLVLSVRDAEE---------PDGCGRAVL-----------RLQEVEVELLTGRTHQIRGQLAAEGCPIYGDCMYGPA 511
            PRL       +RHA+SP +GP W ++A F+GW E+ AR LITFGG YYKP G P  AKPKRELDP R VE+GEY R+FPEP+RY A  GVDWES+IVY+   +MLVNKP G+P H TVDNF ENML G+R  RP L  LLPHRLDIDT GLV+V                      AK    L  IN+ I+ P   ++   D      R ++   +    T  +A     ++P  ++       AA+ A A+  S+ L   +   +A P   +  +GA        A  GA   + G +TKRYRALV +LPG +PL  SP P+THF + S R+PK+F ++RPP   +         S  TP         W+ECR+LVLS  +A           P   G ++             LQEVEV+LLTGRTHQIRGQLAAEGCPIYGD +YGPA
Sbjct:   39 PRLNAPPHDYVRHAYSPRAGPLWSSVAAFLGWTEELARGLITFGGVYYKPGGAPALAKPKRELDPDREVEIGEYLRIFPEPRRYPAFLGVDWESKIVYDCAGVMLVNKPAGVPAHATVDNFAENMLAGIRSVRPDLDLLLPHRLDIDTSGLVIVVTRNLGVQELGLARNRTKHAGRAKGAGTLRSINEIIKRPGLILRTGIDSPRDRRRKNKALRRAAKLTNGTANI---KTPVYQEASMTAATAASAAAAE--SEALPETSQVGRAIPPTQAFATGAGXXXXXXXAETGAVENAVGAITKRYRALVQVLPGRSPLKASPIPMTHFQKVSRRAPKEFRRDRPPQPNATSNAR----SADTPGGGEDDEGSWIECRLLVLSASEASVSPVVTSAGFPSRTGGSIKGGIGDGGVSTGMLQEVEVQLLTGRTHQIRGQLAAEGCPIYGDYLYGPA 481          
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: UPI0019CE451B (RluA family pseudouridine synthase n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=UPI0019CE451B)

HSP 1 Score: 108 bits (270), Expect = 2.400e-22
Identity = 95/380 (25.00%), Postives = 142/380 (37.37%), Query Frame = 0
Query:  130 IRHAHSPVSGPAWEALATFMGWREDRARELITFGGFYYKPHGWPDSAKPKRELDPMRPVELGEYFRVFPEPKRYHACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLREARPGLAPLLPHRLDIDTCGLVMVAKTHEILGMINDAIRAPVRAIQVLRDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKAISKTLLTVNIPDKAGPNNTSSPSGATQANVGAAVVSGRVTKRYRALVNILPGATPLSPGPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFPSEPTPWLECRMLVLSVRDAEEPDGCGRAVLRLQEVEVELLTGRTHQIRGQLAAEGCPIYGDCMYG 509
            ++H HSP  G A + +   +   +    +L   G  Y            +R LDP + V  G   RV  +P+RY      DW+SR+++E +D +++NKP G+P HP+VDN  EN LT L  A   +  L+ HRLD  T G+++  K  E +   N  ++                                                                                                 S  + K+Y AL+        + P  L H++  SPR+PK+     P  +E+              W EC +L+   +D E  DG       +Q + + LLTGRTHQIR QL+  G P+ GD MYG
Sbjct:    8 VKHFHSPDDGMAIDIIKNALILDQTVVADLFQLGAIYINN---------QRCLDPNQTVSYGHQMRVHTKPRRYDV--NYDWKSRVIFEHDDFVILNKPSGLPSHPSVDNVIENSLTQLERAL-NIKLLISHRLDTTTEGIIVYGKKTEFVKAFNIQLQ-------------------------------------------------------------------------------------------------SKNIEKKYVALIQ---AHDKMLPTRLIHYMEPSPRAPKKVT---PIFTEN--------------WDECELLIEKQKDYEV-DGLSE----IQLIRINLLTGRTHQIRAQLSETGYPLLGDKMYG 253          
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: A0A6U0VH21_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VH21_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.630e-21
Identity = 97/353 (27.48%), Postives = 133/353 (37.68%), Query Frame = 0
Query:  168 KPHGWPDSAKPKRELDPMRPVELGEYFRVFPEPKRYHACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLREARPGLA----PLLPHRLDIDTCGLVMVAKTHEILGMINDAIRAPVRAIQVLRDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKAISKTLLTVNIPDKAGPNNTSSPSGATQANVGAAVVSGRVTKRYRALVNILPGATPLSPGPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFPSEPTPWLECRMLVLSVRDAEEPDGCGRAVLRLQEVEVELLTGRTHQIRGQLAAEGCPIYGDCMYGPARHQQT 516
            KP G+    +P+R LDP  P+E G+Y RV+P P RY    G+DW+ RI+    D ++V+KP GIP H T DN REN L  LR    G A      LPHRLDIDT G+++ AK+    G I  +++A     +    +Q  E R +  +                            LH   +                                                                 L HF       P +FV        S+++ + K          C ++V  V      +           V V LLTGRTHQIRGQL+A G PI GD +YG + +  T
Sbjct:   32 KPSGY---RRPERVLDPGFPLEPGDYVRVYPVPARYPEALGIDWDKRILRMDADFVVVDKPAGIPSHATKDNLRENTLEQLRLHFAGEAFSDALRLPHRLDIDTSGVLIAAKSGAACGRIAASLQAASGEKRYAARVQRDESREEPCS----------------------------LHDGLR-----------------------------------------------------------------LEHFQLRQTHGPHRFVT-------SSDDADAKH---------CALVVEKVHRESSDEA---------NVSVRLLTGRTHQIRGQLSAVGWPIVGDNLYGSSDYPPT 263          
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: UPI001991E353 (RluA family pseudouridine synthase n=1 Tax=Moraxellaceae bacterium TaxID=1889775 RepID=UPI001991E353)

HSP 1 Score: 105 bits (261), Expect = 4.030e-21
Identity = 98/380 (25.79%), Postives = 139/380 (36.58%), Query Frame = 0
Query:  130 IRHAHSPVSGPAWEALATFMGWREDRARELITFGGFYYKPHGWPDSAKPKRELDPMRPVELGEYFRVFPEPKRYHACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLREARPGLAPLLPHRLDIDTCGLVMVAKTHEILGMINDAIRAPVRAIQVLRDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKAISKTLLTVNIPDKAGPNNTSSPSGATQANVGAAVVSGRVTKRYRALVNILPGATPLSPGPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFPSEPTPWLECRMLVLSVRDAEEPDGCGRAVLRLQEVEVELLTGRTHQIRGQLAAEGCPIYGDCMYG 509
            ++H +SP  G A + + + +   +     L   G  Y   H        +R LD    V  G   RV  +P+RY      DW+SRIV+E +D +++NKP G+P HP+VDN  EN LT L  A   +  L+ HRLD  T GL++  K  E +                                                                    KA +  L + NI                              K+Y AL+          P  L H++  SPR+PK+                   P     W EC +L+    D +  +     ++ LQ + + LLTGRTHQIR QLA  G P+ GD MYG
Sbjct:   14 VKHFYSPADGLAIDIIQSALNLDQSVVLNLFLLGAVYIN-H--------QRVLDANHAVNYGHQMRVHTKPRRYFV--EYDWKSRIVFEHDDFVILNKPSGLPSHPSVDNVIENSLTQLERAL-NIKLLISHRLDTTTEGLIVYGKKPEFV--------------------------------------------------------------------KAFNLQLQSKNI-----------------------------EKKYVALIQ----TRDTLPERLIHYMEPSPRAPKKVT-----------------PIFTEGWDECELLIEKQMDYKVTE-----LIDLQLIHINLLTGRTHQIRAQLAEAGYPLVGDKMYG 258          
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: A0A2H0WDZ0_9PROT (RluA family pseudouridine synthase n=1 Tax=Bdellovibrio sp. CG10_big_fil_rev_8_21_14_0_10_47_8 TaxID=1975526 RepID=A0A2H0WDZ0_9PROT)

HSP 1 Score: 103 bits (256), Expect = 2.000e-20
Identity = 96/381 (25.20%), Postives = 141/381 (37.01%), Query Frame = 0
Query:  130 IRHAHSPVSGPAWEALATFMGWREDRARELITFGGFYYKPHGWPDSAKPKRELDPMRPVELGEYFRVFPEPKRYHACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLREARPGLAPL-LPHRLDIDTCGLVMVAKTHEILGMINDAIRAPVRAIQVLRDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKAISKTLLTVNIPDKAGPNNTSSPSGATQANVGAAVVSGRVTKRYRALVNILPGATPLSPGPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFPSEPTPWLECRMLVLSVRDAEEPDGCGRAVLRLQEVEVELLTGRTHQIRGQLAAEGCPIYGDCMYG 509
            +RH  SP++G   + L   +G   D+ R L+  G  Y +     +SA+          ++   Y R+   P+R+     ++    +VYE + L +VNKP G+P HP+VDN +EN+LT L++      PL + HRLD+ T GL++ AKT E    IN A                                                                                                   SG   K YRALV+       L  G   H+++ SPR+PK   K                 +E   W  C++ +   +   E            EV+++LLTGRTHQIR QL+ EG P+ GD  YG
Sbjct:   20 VRHLLSPLNGTLEQVLEKSLGLTSDQTRALLHLGAIYLQGKRLNESAQ-------QTEIKAQTYLRIHQTPRRF-PIEKLNPTQCLVYEDDGLFIVNKPAGLPVHPSVDNIQENVLTLLKQFYQ--QPLFITHRLDVATEGLLVFAKTKEQQSKINSAFE-------------------------------------------------------------------------------------------------SGLTKKFYRALVH----GQELPTGRWLHYMQPSPRAPKTVSK-----------------TEQAQWKTCQLDLFEQKKLGENQS---------EVQIQLLTGRTHQIRAQLSCEGFPVIGDKAYG 263          
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: A0A1Y1HRB5_KLENI (PseudoU_synth_2 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HRB5_KLENI)

HSP 1 Score: 95.5 bits (236), Expect = 3.630e-17
Identity = 96/357 (26.89%), Postives = 128/357 (35.85%), Query Frame = 0
Query:  180 RELDPMRPVELGEYFRVFPEPKRYHACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLREARPGLAPL-LPHRLDIDTCGLVMVAKTHEILGMINDAIRAPVRAIQVLRDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKAISKTLLTVNIPDKAGPNNTSSPSGATQANVGAAVVSGRVTKRYRALVNILPGATPLSPGPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFPSEPTPWLECRMLVLSVRDAEEPDGCGRAVLRLQ-----------EVEVELLTGRTHQIRGQLAAEGCPIYGDCMYGPARHQQTPHSMESSS 524
            R  DP R +  G Y RV   PKR+  C  VDW  R++ ET D ++++KP G+P   TVDN  EN    L EA     PL + HRLD+ T G +++AKT   L   N                   +L  DR                                                                              +V K YRAL    P   PL  G L H+ +    +P+    E   G                 WL C + +L+V +   P G   + LR++           E  V L+TGRTHQ+R QLA  GCP+ GD MY P    +    +E SS
Sbjct:  122 RLQDPFRLLRQGGYLRVHVHPKRFPRCYEVDWRGRVLTETPDYVILDKPAGVPVQGTVDNLVENCAACLLEALGLEEPLKVTHRLDVGTEGCLVLAKTPAFLRSFN-------------------QLLADR------------------------------------------------------------------------------KVHKTYRALAAARP---PL--GRLLHWTQPKSYAPRILSDETRDG-----------------WLPCELEILAVDEVPWPTGAVGS-LRMEDGGWPPQATAYECTVRLITGRTHQVRAQLARVGCPLLGDTMYMPGPAIEHLAGLEPSS 358          
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: A0A1Z5J8W1_FISSO (PseudoU_synth_2 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8W1_FISSO)

HSP 1 Score: 96.7 bits (239), Expect = 4.900e-17
Identity = 105/407 (25.80%), Postives = 149/407 (36.61%), Query Frame = 0
Query:  156 ARELITFGGFYYKPHGWPDSAKPKRELDPMR-----PVELGEYFRVFPEPKRYHACSGVDWESRIVYETEDL-------------MLVNKPPGIPCHPTVDNFRENMLTGLREARPGLAPLLPHRLDIDTCGLVMVAKTHEILGMINDAIRAPVRAIQVLRDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKAISKTLLTVNIPDKAGPNNTSSPSGATQANVGAAVVSGRVTKRYRALV--------NILPGATPLSP---GPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFPSEPTPWLECRMLVLSVRDAEEPDGCGRAVLR----------------LQEVEVELLTGRTHQIRGQLAAEGCPIYGDCMYGPARHQQTP 517
            A EL+  G  ++ P   P    P + + P+R      ++ G+Y RV   P+R+ A    DW +   Y + D              M+++KPP +P H TVDN REN+ + L E         P RLD +T GL++V+ +                  +V  +     LRH       +N+T  +  F            R  +H                                                 K+YR LV        +IL  A  L       + H+L  S R+PK FV E              F S    WLEC + +    D     G G+ +                  + E+E+ELLTGRTHQ+RGQL+A G PI GD  YG A  Q  P
Sbjct:  102 ALELMRLGAVWFLPFDAPRD--PSKGIKPVRLFENRDLQPGDYLRVHHNPRRFPAVKKYDWSAFKSYASSDKPGIIVARNATKGWMVIDKPPNVPVHMTVDNSRENVASCLEEVLRSYVTT-PQRLDQNTSGLLVVSTS------------------KVFANYYADLLRHKTALQLEVNQTQETEHF------------RDYIH-------------------------------------------------KKYRCLVCLQEDDDRSILEAARELQQLRGSIIRHYLEPSIRAPKHFVAET-------------FDSA---WLECLLRITGTSDVYALVGHGQELANNLWSCPAEDRPPSCQAVMELEIELLTGRTHQVRGQLSAMGFPIVGDTQYGGAIPQSVP 410          
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: A0A2N9ITH5_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9ITH5_FAGSY)

HSP 1 Score: 92.8 bits (229), Expect = 8.100e-16
Identity = 103/390 (26.41%), Postives = 151/390 (38.72%), Query Frame = 0
Query:  188 VELGEYFRVFPEPKRYHACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLREARPGLAPL-LPHRLDIDTCGLVMVAKTHEILGMINDAIRAP-VRAIQVL---RDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKEL---------------------HAAAKAKAKAISKTLLTVNIPDKAGPNNTSSPSGATQANVG-----------------------------AAVVSGRVTKRYRALVNILPGATPLSPGPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFPSEPTPWLECRMLVLSVRDAEEP----------DGCGRAVLRLQ-EVEVELLTGRTHQIRGQLAAEGCPIYGDCMYGPA 511
            VE G Y RV   PKR+  C  +DW+SRI+  TE  ++++KP G     T DN  E+  T    A     PL   H++D  T G V++A+T E   + +  IR   V+ + +      + IG + H         +  S  F     S +L  L  KE+                     H A + K       LLT       G  +    S AT A                                 +V  G++ ++    + +   A P+  G +TH++R    +P+   ++   G                 WL CR+ VL  ++   P          D CG     +  E ++ LLTGRTHQIR QLAA G P+ GD MY PA
Sbjct:  192 VEAGTYIRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLTIPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPIGIITHYMRPVNMAPRLISEDFTKGWLSCRLEVLECKEVPWPNAVIEKKYGVDDCGWPSQHIAYECKI-----NLLTGRTHQVGGTTDNIEESCATFATRALGLTIPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPIGIITHYMRPVNMAPRLISEDFTKG-----------------WLSCRLEVLECKEVPWPNAVIEKKYGVDDCGWPSQHIAYECKINLLTGRTHQIRAQLAACGAPMVGDSMYMPA 559          
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Match: A0A835SYH5_9CHLO (PseudoU_synth_2 domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SYH5_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 4.110e-15
Identity = 117/446 (26.23%), Postives = 174/446 (39.01%), Query Frame = 0
Query:  112 TLPCCIEPPRLAPSQASTIRHAHSPVSGPAWEALATFMGWREDRARELITFGGFYYKPHG---WPD--SAKPKRELDPMRPVE--------------------------LGEYFRVFPEPKRY---HACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLREAR--PGLAPLLPHRLDIDTCGLVMVAKTHEILGMINDAIRAPVRAIQVLRDIQIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKAISKTLLTVNIPDKAGPNNTSSPSGATQANVGAAVVSGRVTKRYRALVNILPGATPL--SPGPLTHFLRNSPRSPKQF-----VKERPPGSESNEEEELKFPSEPTPWLECRMLVL----SVRDAEEPDGCG-RAVLRLQEVEVELLTGRTHQIRGQLAAEGCPIYGDCMYG 509
            TL   ++ P L       + H  +   GPA E LA  +    +    L+ FG  YY P      PD  +     +LD +R V                           +G Y R    PKR+   HA S  DW +R++    D ++V+KPPG+   PTVDN +E++L  +  A   PG      HRLD  T G+V++ +   I       + A                                   D++ S ++RK  R  +     A        +L  ++ +  G +  S+     QA   +   +G  T  Y        G+ P   S G L H++    R+  +      V+E   G++  E   LK        L  +   L    +  D E+P   G RA     EV VEL+TGRTHQ+R Q+AA GCP+ GD +YG
Sbjct:   20 TLQKALQDPPLERQLGVHVAHVIAAREGPASEVLAEQLAVPRELVLRLLWFGALYYSPVAPLPHPDRMAGLAPEQLDSIRAVRAAGLARWGRDSKLQTPRRLATDDVVAMGGYLRAHCHPKRFPVAHALSAQDWSARLLAVRPDHVVVSKPPGLQVPPTVDNVQESLLACVERALSLPGGVLQPAHRLDAGTEGVVVLVRDSPIFAAYFRGLMA-----------------------------------DKATSDRVRKTYRCLVLKPPPAHLFPPGAVMLDQSVQEGCGADVNSA-----QATFSSDRGAGE-TDSY--------GSDPKAGSDGRLVHWVLEDQRAAGEMAHTVVVEEGTAGAQRCE---LKLKQVARVRLSQQAAALWGLDTRADDEKPSASGSRAGPSAYEVTVELVTGRTHQVRVQMAAIGCPLVGDHLYG 413          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig780.15823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA94_9PHAE1.430e-10045.41PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
D7G4K2_ECTSI3.270e-9244.03Putative RNA pseudouridylate synthase n=1 Tax=Ecto... [more]
UPI0019CE451B2.400e-2225.00RluA family pseudouridine synthase n=1 Tax=Bdellov... [more]
A0A6U0VH21_9STRA1.630e-2127.48Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI001991E3534.030e-2125.79RluA family pseudouridine synthase n=1 Tax=Moraxel... [more]
A0A2H0WDZ0_9PROT2.000e-2025.20RluA family pseudouridine synthase n=1 Tax=Bdellov... [more]
A0A1Y1HRB5_KLENI3.630e-1726.89PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A1Z5J8W1_FISSO4.900e-1725.80PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A2N9ITH5_FAGSY8.100e-1626.41Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A835SYH5_9CHLO4.110e-1526.23PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 221..288
e-value: 1.1E-7
score: 32.1
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 185..519
NoneNo IPR availablePANTHERPTHR21600:SF52RNA PSEUDOURIDINE SYNTHASE 6, CHLOROPLASTICcoord: 185..519
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..757
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.522
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 376..516
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 209..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig780contigH-paniculata_contig780:3921..29644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig780.15823.1mRNA_H-paniculata_contig780.15823.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig780 1638..29854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig780.15823.1 ID=prot_H-paniculata_contig780.15823.1|Name=mRNA_H-paniculata_contig780.15823.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=758bp
MAAGWRLAAAGALQVIVRSAVGGAVTRVPSPSWSRSRARPPMKLSVLWLV
NHRVCRWLPAVSGCDTTRGLAGRAIPTNVGESPARRRLNVEHDGGSWGLT
VAAHNGPAEDGTLPCCIEPPRLAPSQASTIRHAHSPVSGPAWEALATFMG
WREDRARELITFGGFYYKPHGWPDSAKPKRELDPMRPVELGEYFRVFPEP
KRYHACSGVDWESRIVYETEDLMLVNKPPGIPCHPTVDNFRENMLTGLRE
ARPGLAPLLPHRLDIDTCGLVMVAKTHEILGMINDAIRAPVRAIQVLRDI
QIGELRHDRVTTQFLNKTGSSAFFDRSESPKLRKLRRKELHAAAKAKAKA
ISKTLLTVNIPDKAGPNNTSSPSGATQANVGAAVVSGRVTKRYRALVNIL
PGATPLSPGPLTHFLRNSPRSPKQFVKERPPGSESNEEEELKFPSEPTPW
LECRMLVLSVRDAEEPDGCGRAVLRLQEVEVELLTGRTHQIRGQLAAEGC
PIYGDCMYGPARHQQTPHSMESSSRIVPEKTPRPPETERHITASRSTEKT
TGGDLRGQGRQLSRSYRVAESGTLGNGAGGVGVAEKSPTQRGGDILENQG
GTCERTGGSPPEMGGGIVEKRVGRVGAVEGYTPEQVGSSPGEPEGILQGT
AGTRIGPLAPGPKMIPLQNPGSRYCDGECGTVVGNDAEISRNDGVGEVAR
GHGEEGVLRVLEKFVESPLLALQANEILLEIGGKVHSYRLPQDSCWWYSG
DQHLLQF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf