prot_H-paniculata_contig7781.15808.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7781.15808.1
Unique Nameprot_H-paniculata_contig7781.15808.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length400
Homology
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BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: A0A126X4A4_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum thunbergii TaxID=127542 RepID=A0A126X4A4_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 9.990e-91
Identity = 150/234 (64.10%), Postives = 183/234 (78.21%), Query Frame = 0 
Query:    1 MRKKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGSEQTADEDDEIGLGEDPDSELPIGGANAGGGRGPSGGRSSSQSANRPTQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQRSIPGPLPPFLKK 234
            +RKKFFYQSLQ R+++LR+EN++LK +LTER+GE+A ++V+DCTSELSR+++AG+ +T         GED D+E+         G G  GG+ +   A  PT+ L +PDF L++SLQLAQQ FVVTEPSLPDNPIV+AS GFLK TGY  EQVVGRNCRFLQG DTD+Q+VA IR+AI  GEDA VNL+NYKADGTPFWN FFVAALRD NNRI+NYVG Q  IPGPLPPF +K
Sbjct:   31 LRKKFFYQSLQKRLATLRAENKTLKSVLTERMGERAKQVVYDCTSELSRQIIAGTVET---------GEDVDAEIE--------GMGGEGGKGN---AGTPTKILARPDFNLVKSLQLAQQIFVVTEPSLPDNPIVYASAGFLKLTGYKIEQVVGRNCRFLQGPDTDKQSVAIIRQAIGKGEDAHVNLINYKADGTPFWNNFFVAALRDENNRIMNYVGTQCPIPGPLPPFRRK 244
[Close]
BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: A0A126X4A9_9PHAE (Putative LOV domain-containing protein n=3 Tax=Sargassum TaxID=3015 RepID=A0A126X4A9_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 4.250e-89
Identity = 150/234 (64.10%), Postives = 183/234 (78.21%), Query Frame = 0 
Query:    1 MRKKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGSEQTADEDDEIGLGEDPDSELPIGGANAGGGRGPSGGRSSSQSANRPTQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQRSIPGPLPPFLKK 234
            +RKKFFYQSLQ R+++LR+EN++LK +LTER+GE+A ++V+DCTSELSR+++AG+ +T         GED D+E+         G G  GG+ +   A  PT+ L +PDF L++SLQLAQQ FVVTEPSLPDNPIV+AS GFLK TGY  EQVVGRNCRFLQG DTD+Q+VA IR+AI  GEDA VNL+NYKADGTPFWN FFVAALRD NNRI+NYVG Q  IPGPLPPF +K
Sbjct:   94 LRKKFFYQSLQKRLATLRAENKTLKSVLTERMGERAKQVVYDCTSELSRQIIAGTVET---------GEDVDAEIE--------GMGGEGGKGN---AGTPTKILARPDFNLVKSLQLAQQIFVVTEPSLPDNPIVYASAGFLKLTGYKIEQVVGRNCRFLQGPDTDKQSVAIIRQAIGKGEDAHVNLINYKADGTPFWNNFFVAALRDENNRIMNYVGTQCPIPGPLPPFRRK 307
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BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: A0A126WXM2_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum integerrimum TaxID=1159339 RepID=A0A126WXM2_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 1.340e-88
Identity = 153/234 (65.38%), Postives = 185/234 (79.06%), Query Frame = 0 
Query:    1 MRKKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGSEQTADEDDEIGLGEDPDSELPIGGANAGGGRGPSGGRSSSQSANRPTQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQRSIPGPLPPFLKK 234
            +RKKFFYQSLQ R+++LR+EN++LK +LTERLGE+A ++V+DCTSELSR+V+AG+ +T         GED D+E+         G G  GG+ +  +   PT+ L +PDF L++SLQLAQQ FVVTEPSLPDNPIVFAS GFLK TGY  EQVVGRNCRFLQG DTD+Q+VA IR+AI+ GEDA VNL+NYKADGTPFWN FFVAALRD NNRI+NYVGAQ  IPGPLPPF +K
Sbjct:  320 LRKKFFYQSLQKRLATLRAENKTLKSVLTERLGERAKQVVYDCTSELSRQVIAGTIET---------GEDEDAEIE--------GMGGEGGKGNGDA---PTKILARPDFNLVKSLQLAQQIFVVTEPSLPDNPIVFASAGFLKLTGYKNEQVVGRNCRFLQGPDTDKQSVAIIRQAIKKGEDAHVNLINYKADGTPFWNNFFVAALRDENNRIMNYVGAQCPIPGPLPPFRRK 533
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BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: A0A126WUU4_9PHAE (Putative LOV domain-containing protein n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A126WUU4_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 2.390e-87
Identity = 153/231 (66.23%), Postives = 183/231 (79.22%), Query Frame = 0 
Query:    1 MRKKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGSEQTADEDDEIGLGEDPDSELPI-GGANAGGGRGPSGGRSSSQSANRPTQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQRSIPGPLPP 230
            MRKKFFYQSLQ +M+ LRSENR+LK ILT+RLG+K+ ++++DCT+ELSR+V+ G      EDDE    E   +E+ + GG +AGG R   GG    + A R   +L++PD+RLM+SLQ AQQNFVVTEPSLPDNPIVFAS GFLK TGYT +QV+G NCRFLQG DTD++AVAT+R+AIE GEDASV  LNYKADGTPFWNQFFVA LRD  NRIVNYVGAQ  +PGPLPP
Sbjct:   46 MRKKFFYQSLQKQMAVLRSENRALKSILTDRLGDKSKQVIYDCTTELSRQVVQGR---IGEDDE----ETVTAEMGVAGGGDAGGTRSGDGG--GGKGARR---DLSRPDYRLMKSLQTAQQNFVVTEPSLPDNPIVFASDGFLKLTGYTSKQVIGNNCRFLQGPDTDKRAVATVRQAIEKGEDASVCFLNYKADGTPFWNQFFVAPLRDDKNRIVNYVGAQCLVPGPLPP 264
[Close]
BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: A0A126X3T8_SARHM (Putative LOV domain-containing protein n=1 Tax=Sargassum hemiphyllum TaxID=127544 RepID=A0A126X3T8_SARHM)

HSP 1 Score: 281 bits (720), Expect = 4.190e-85
Identity = 147/235 (62.55%), Postives = 180/235 (76.60%), Query Frame = 0 
Query:    1 MRKKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGSEQTADEDDEIGLGEDPDSELP-IGGANAGGGRGPSGGRSSSQSANRPTQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQRSIPGPLPPFLKK 234
            +RKKFFYQSLQ R+++LR+EN++LK +LTER+GE+A ++V+DCTSELSR++MAG+ +T         GED D+E+  +GG                +   RPT+ L +PDF L++SLQ AQQ FVVTEPSLPDNPIV+AS GFLK TGY  EQVVGRNCRFLQG DTD+++VA IR+AI  GEDA VNL+NYKADGTPFWN FFVAALRD NNRI+NYVG Q  IPGPLPPF +K
Sbjct:  286 LRKKFFYQSLQKRLATLRAENKTLKSVLTERMGERAKQVVYDCTSELSRQIMAGTVET---------GEDVDAEIEGMGG----------------EDGKRPTKLLARPDFNLVKSLQSAQQIFVVTEPSLPDNPIVYASAGFLKLTGYKIEQVVGRNCRFLQGPDTDKRSVAIIRQAIGKGEDAHVNLINYKADGTPFWNNFFVAALRDENNRIMNYVGTQCPIPGPLPPFRRK 495
[Close]
BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: D8LI77_ECTSI (N/a (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI77_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 3.660e-58
Identity = 117/226 (51.77%), Postives = 147/226 (65.04%), Query Frame = 0 
Query:   14 MSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGSEQTADEDDE------IGLGEDPDSELPIGGANAGGGRGPSGGRSSSQSANRP------TQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQRSIPGP 227
            M++LR +NR  K IL +RLGE+A ++V DCTSELSR+V AGS + A+  D       + +    D+E                                 T+ L++PD+RLM+S+++AQQNFVVTEPSL DNPIVFAS GF K TGYT ++  G   RFLQG DTDR+++AT+R+AI  GED SV LLNYKADGT FWNQFFVAALRD  +RIVNYVGAQ  +P P
Sbjct:    1 MAALRKDNRKFKAILRDRLGERAQQVVFDCTSELSRQVTAGSMEDAEGTDGAVTMTMVMMDVQADAEFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTRGLSRPDYRLMKSIEMAQQNFVVTEPSLADNPIVFASDGFFKLTGYTSKE--GATARFLQGPDTDRKSIATLRQAITRGEDVSVCLLNYKADGTTFWNQFFVAALRDDQHRIVNYVGAQCVVPYP 224
[Close]
BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: A0A7S2CQX5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQX5_9STRA)

HSP 1 Score: 196 bits (498), Expect = 8.400e-55
Identity = 108/227 (47.58%), Postives = 136/227 (59.91%), Query Frame = 0 
Query:    1 MRKKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGSEQTADEDDEIGLGEDPDSELPIGGANAGGGRGPSGGRSSSQSANRPTQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQRSIPGP 227
            +RKKFF++SLQ ++S L+ EN  LK I+   + + + KI+ DC + L   V   S                                            + T+ L + DF LMQ+LQ AQ++F +T+PSLPDNPIVFAS  FL+ TGYT EQV+GRNCRFLQG +TDR+ V  IR+ IE GED SV +LNYKADGT FWNQFFVAALRD N R+VNYVG Q  +P P
Sbjct:  196 LRKKFFFESLQKQVSELQRENSVLKDIIKVNMSDVSAKILSDCDASLPTIVTEHS-------------------------------------------GKATEILNRSDFNLMQALQAAQRSFCITDPSLPDNPIVFASQSFLETTGYTMEQVLGRNCRFLQGPETDREKVQQIRRGIEHGEDVSVCILNYKADGTTFWNQFFVAALRDVNKRVVNYVGVQCPVPKP 379
[Close]
BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: A0A1E7FU48_9STRA (Putative aureochrome n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FU48_9STRA)

HSP 1 Score: 188 bits (477), Expect = 7.930e-54
Identity = 106/224 (47.32%), Postives = 139/224 (62.05%), Query Frame = 0 
Query:    1 MRKKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGSEQTADEDDEIGLGEDPDSELPIGGANAGGGRGPSGGRSSSQSANRPTQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQRSI 224
            +RKKF  +SLQ ++++L+ EN+ L+II+ + + E A  I+ +C +                    G G++P   LP            S G        +    L + DF+L+ SL   QQNFV+++P LPDNPIVFA+PGF K TGYT EQV+GRNCRFLQG+ TD + V  +RKAI+SG D +V +LNYKADGTPFWNQFFVAALRD +N IVNYVG Q  I
Sbjct:   22 VRKKFMLESLQEQVAALQRENQRLRIIVQDSIPEHAQVIISECCTSSPL---------------FGDGDNP--ALP------------SIGLDDESIDGKKASALVRSDFQLIDSLSAGQQNFVLSDPRLPDNPIVFATPGFYKLTGYTAEQVLGRNCRFLQGSGTDPKTVDIVRKAIQSGSDCTVCILNYKADGTPFWNQFFVAALRDSDNCIVNYVGVQTEI 216
[Close]
BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: A0A7S1E1Q4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E1Q4_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.140e-53
Identity = 103/219 (47.03%), Postives = 133/219 (60.73%), Query Frame = 0 
Query:    3 KKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGSEQTADEDDEIGLGEDPDSELPIGGANAGGGRGPSGGRSSSQSANRPTQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQ 221
            KKF  +SLQ ++  L+ EN  L++++ E++ +KA KI+ +C S+ +                  L  DP    P                   +   + T  L + DF LM+SL   QQNFV+++P LPDNPIV+ASPGF   TGYT EQV+GRNCRFLQG  TD +AV  IRKA+ SG DA+  +LNYKADG+PFWNQFFVAALRD +N IVNYVG Q
Sbjct:    1 KKFMLESLQEQVRGLQKENVELRMLIQEKVPDKAQKIISECCSKNT------------------LFHDPTDGTP-----------------DDEKKGKDTTALERSDFSLMESLTSGQQNFVLSDPRLPDNPIVYASPGFYTLTGYTPEQVLGRNCRFLQGPSTDPRAVDIIRKAVASGADATTCILNYKADGSPFWNQFFVAALRDSDNCIVNYVGVQ 184
[Close]
BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Match: A0A7S2G8H4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8H4_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.670e-53
Identity = 112/231 (48.48%), Postives = 146/231 (63.20%), Query Frame = 0 
Query:    1 MRKKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSREVMAGS--EQTADEDDEIGLGEDPDSELPIGGANAGGGRGPSGGRSSSQSANRPTQE--------LTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTKEQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWNQFFVAALRDGNNRIVNYVGAQ 221
            +RKKF  +SLQ +++ LR  N +L+ ++   L E+AT+I+  C ++ S  +M     E T+    + GL ED                   GGR+   +  +   E        LT+PD+RLM +L  AQQNF V++PSLPDNPIV+AS GFLK TGYT+EQV+GRNCRFLQG  TD++ V  IR  ++ G+D SV LLNYKADGTPFWNQFFVAALRD N  IVN+VG Q
Sbjct:  240 IRKKFLLESLQDQLAGLREVNTNLRKLIRSELPEQATEILTQCMTQESLLLMDTDMKEATSLISKQAGLDED-------------------GGRADPSTERQGLPEGIGGHSHVLTEPDYRLMLNLVQAQQNFTVSDPSLPDNPIVYASEGFLKLTGYTREQVIGRNCRFLQGPKTDQKMVDHIRDGVKDGKDTSVCLLNYKADGTPFWNQFFVAALRDANGNIVNFVGVQ 451
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7781.15808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A126X4A4_9PHAE9.990e-9164.10Putative LOV domain-containing protein n=1 Tax=Sar... [more]
A0A126X4A9_9PHAE4.250e-8964.10Putative LOV domain-containing protein n=3 Tax=Sar... [more]
A0A126WXM2_9PHAE1.340e-8865.38Putative LOV domain-containing protein n=1 Tax=Sar... [more]
A0A126WUU4_9PHAE2.390e-8766.23Putative LOV domain-containing protein n=1 Tax=Pun... [more]
A0A126X3T8_SARHM4.190e-8562.55Putative LOV domain-containing protein n=1 Tax=Sar... [more]
D8LI77_ECTSI3.660e-5851.77N/a (Partial) (Fragment) n=1 Tax=Ectocarpus silicu... [more]
A0A7S2CQX5_9STRA8.400e-5547.58Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1E7FU48_9STRA7.930e-5447.32Putative aureochrome n=1 Tax=Fragilariopsis cylind... [more]
A0A7S1E1Q4_9STRA1.140e-5347.03Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2G8H4_9STRA1.670e-5348.48Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainPFAMPF13426PAS_9coord: 130..222
e-value: 3.4E-18
score: 65.8
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 134..222
e-value: 1.0E-9
score: 36.6
IPR000014PAS domainPROSITEPS50112PAScoord: 132..181
score: 9.942
NoneNo IPR availableGENE3D3.30.450.20coord: 122..227
e-value: 5.3E-40
score: 138.8
NoneNo IPR availablePANTHERPTHR47429FAMILY NOT NAMEDcoord: 113..224
NoneNo IPR availablePANTHERPTHR47429:SF2PROTEIN TWIN LOV 1coord: 113..224
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 131..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7781contigH-paniculata_contig7781:2032..7954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7781.15808.1mRNA_H-paniculata_contig7781.15808.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7781 1997..10174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7781.15808.1 ID=prot_H-paniculata_contig7781.15808.1|Name=mRNA_H-paniculata_contig7781.15808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=400bp
MRKKFFYQSLQSRMSSLRSENRSLKIILTERLGEKATKIVHDCTSELSRE
VMAGSEQTADEDDEIGLGEDPDSELPIGGANAGGGRGPSGGRSSSQSANR
PTQELTKPDFRLMQSLQLAQQNFVVTEPSLPDNPIVFASPGFLKFTGYTK
EQVVGRNCRFLQGADTDRQAVATIRKAIESGEDASVNLLNYKADGTPFWN
QFFVAALRDGNNRIVNYVGAQRSIPGPLPPFLKKHAVAGATSTGATATGG
PGNPEINRGGGQEMNSSVDPVAVKVGDGGEDTGKREARKKECEDGASNGG
ADGPDGRRSAKGIGLPTAVRDASASGVRAAAVPARVAGLVEKSNRSEGTC
APKRDAAGDNSATEAAAATETVTETETPKGGLPGEARVGMVKDESLMQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR035965PAS-like_dom_sf