prot_H-paniculata_contig775.15770.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig775.15770.1
Unique Name	prot_H-paniculata_contig775.15770.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	165

Homology

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BLAST of mRNA_H-paniculata_contig775.15770.1 vs. uniprot
Match: D8LUB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB9_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 6.740e-35
Identity = 91/162 (56.17%), Postives = 110/162 (67.90%), Query Frame = 0

Query:    3 IDADLARIRKRRREALRXXXXMERKGARLATVLQDVNQFVEALQMGVSSSFDDNGLTPVPAKVQEAVESSAELRAIAARAQGLTRRMGELQAQSAAAAVSGGHGDEGGGSQNXXXXXXXXXIAARAVAGQGNLQSIFERSRDQQVVAGGVEEYSALQARLNG 164
            +DA++  +RKRRR+ LR    + RKGAR   +LQDV  FV+ALQMGVSSSFDDNGLTP+P+KVQEAV+S AELR  A RAQ LTRR+ E QA+ +A          G G   XXXXXXXXX          +LQS+F+RS +QQVVAG   EYS L+ RL G
Sbjct:  168 LDAEIQHLRKRRRQGLRRCAALVRKGARETVLLQDVKDFVDALQMGVSSSFDDNGLTPIPSKVQEAVQSCAELRVTADRAQALTRRL-ERQAEQSA----------GWGXXXXXXXXXXXXXXXXXXXXXRDLQSMFQRSSEQQVVAGSATEYSTLETRLRG 318

[Close]

BLAST of mRNA_H-paniculata_contig775.15770.1 vs. uniprot
Match: A0A6H5KN64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN64_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 7.850e-33
Identity = 88/162 (54.32%), Postives = 106/162 (65.43%), Query Frame = 0

Query:    3 IDADLARIRKRRREALRXXXXMERKGARLATVLQDVNQFVEALQMGVSSSFDDNGLTPVPAKVQEAVESSAELRAIAARAQGLTRRMGELQAQSAAAAVSGGHGDEGGGSQNXXXXXXXXXIAARAVAGQGNLQSIFERSRDQQVVAGGVEEYSALQARLNG 164
            +DA++  +RKRRR+ LR    + R+GAR   +LQDV  FV+ALQMGVSSSFDDNGLTP+P+KVQEAV+S AELR  A RAQ LTRR+     QSA             G   XXXXXXXXX          +LQS+F+RS +QQVVAG   EYS L+ RL G
Sbjct:  184 LDAEIQHLRKRRRQGLRRCAALVRRGARETVLLQDVKDFVDALQMGVSSSFDDNGLTPIPSKVQEAVQSCAELRVTADRAQALTRRLERQVEQSAE-----------WGXXXXXXXXXXXXXXXXXXXXXRDLQSMFQRSSEQQVVAGSATEYSTLKTRLRG 334

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig775.15770.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig775.15770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LUB9_ECTSI	6.740e-35	56.17	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KN64_9PHAE	7.850e-33	54.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..95
None	No IPR available	COILS	Coil	Coil	coord: 7..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig775	contig	H-paniculata_contig775:3968..5679 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig775.15770.1	mRNA_H-paniculata_contig775.15770.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig775 3944..5771 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig775.15770.1 ID=prot_H-paniculata_contig775.15770.1|Name=mRNA_H-paniculata_contig775.15770.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp
MEIDADLARIRKRRREALRRREAMERKGARLATVLQDVNQFVEALQMGVS
SSFDDNGLTPVPAKVQEAVESSAELRAIAARAQGLTRRMGELQAQSAAAA
VSGGHGDEGGGSQNGSANGAAGGIAARAVAGQGNLQSIFERSRDQQVVAG
GVEEYSALQARLNG*