prot_H-paniculata_contig7728.15752.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7728.15752.1
Unique Nameprot_H-paniculata_contig7728.15752.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length328
Homology
BLAST of mRNA_H-paniculata_contig7728.15752.1 vs. uniprot
Match: D8LKQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKQ0_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 9.000e-57
Identity = 108/170 (63.53%), Postives = 122/170 (71.76%), Query Frame = 0
Query:   72 PTCRLGTRARAQTAVARDDGLSMAAGQGFGTSVPE---AGAEVEPTKGSGQTRAVSG-SGLVSWEKEYKAYIKRTGKYLCSMSWEGHEEMGRGAIFANYDDARAEGKLNDAEKFGGIPSMYIPLKEFESMRAADRP-GEEDDLAQIMHRVQTYRPETEFVVVFQAAGVMG 236
            P  R G   R   A AR     + A +GFG SV     A A     +G G+     G SG+ SWEKEYKAYIKRTG+YLCSMSWEGH+EMGRGAIFANYDDAR E KLN+ +KFGGIPSMY+PL EFESM+AA +  GEEDDL QI+ RV+ YRPE EFVVVFQAAGVMG
Sbjct:   86 PPARAGLAQRETAATAR-----VMAAKGFGKSVEPPSPAPATTGGEEGGGKAPGSEGLSGVGSWEKEYKAYIKRTGQYLCSMSWEGHQEMGRGAIFANYDDARKEDKLNETDKFGGIPSMYVPLTEFESMKAAGQEAGEEDDLGQIVRRVKDYRPEREFVVVFQAAGVMG 250          
BLAST of mRNA_H-paniculata_contig7728.15752.1 vs. uniprot
Match: A0A836CCX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX0_9STRA)

HSP 1 Score: 133 bits (334), Expect = 5.490e-34
Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 0
Query:  131 WEKEYKAYIKRTGKYLCSMSWEGHEEMGRGAIFANYDDARAEGKLNDA-EKFGGIPSMYIPLKEFESM-RAADRPGEEDDLAQIMHRVQTYRPETEFVVVFQAAGVMGYETAS 241
            WE+EYKA+I+R G Y+CS+SW+ +E+MGRGA+++NYD  +A G L++A EK GGIPSM+ PL EFE+M   A   GE +DL QI+ R++ Y P  EFVVVFQA GV G +  S
Sbjct:   36 WEREYKAFIRRCGAYVCSLSWQAYEKMGRGAVYSNYDGGKAAGTLSEADEKLGGIPSMFCPLHEFEAMVPGAAAKGEHNDLDQIIQRIKQYDPTKEFVVVFQAGGVCGADICS 148          
BLAST of mRNA_H-paniculata_contig7728.15752.1 vs. uniprot
Match: A0A7S2WW30_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW30_9STRA)

HSP 1 Score: 106 bits (265), Expect = 6.670e-24
Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 0
Query:  131 WEKEYKAYIKRTGKYLCSMSWEGHEEMGRGAIFANYDDARAEGKLNDAEKFGGIPSMYIPLKEFESMRAADRPGEEDDLAQIMHRVQTYRPETEFVVVFQAAGVMGYETAS 241
            WEK+YK+ + R G+ L +MSW+G E+MGRG I ANYD+  A     +++K+G IPSMY+P  + ++ +     GEE    QI  R+++Y PE EFVVVF A G+MG +  +
Sbjct:   61 WEKQYKSMLARIGEDLTAMSWDGFEKMGRGVILANYDNVTA---ATESDKYGSIPSMYVPEAQIKAGQINLAAGEESSFDQIASRLESYDPEREFVVVFHAEGLMGTDVVT 168          
BLAST of mRNA_H-paniculata_contig7728.15752.1 vs. uniprot
Match: A0A7S3EJF2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJF2_9RHOD)

HSP 1 Score: 102 bits (254), Expect = 1.020e-22
Identity = 59/154 (38.31%), Postives = 91/154 (59.09%), Query Frame = 0
Query:   83 QTAVARDDGLSMAAGQGFGTSVPEAGAEVEPTKGSGQTRAVSGSGLVSWEKEYKAYIKRTGKYLCSMSWEGHEEMGRGAIFANYDDARAEGKLNDAEKFGGIPSMYIPLKEFESMRAADRPGEEDDLAQIMHRVQTYRPETEFVVVFQAAGVMG 236
            ++A  R   +S+A  +GFG S   A  E+   + +GQ           W+KEYKA++KR GK +C+M ++G+  +GRGA+FANY +A  + + +D +    +PSMY+P+ +     A+ RP +  D+  I  RV  Y PE +FVVVF+  GVMG
Sbjct:   25 RSACRRSPVVSLA--KGFGKSRSSAD-EIPQAQSAGQVGV--------WQKEYKAFLKRNGKDICAMCYDGYRRLGRGAVFANYSEAMDKVE-SDIDLAQSVPSMYVPMDKLRES-ASRRPSQGGDMKHITDRVARYDPEKQFVVVFECNGVMG 165          
BLAST of mRNA_H-paniculata_contig7728.15752.1 vs. uniprot
Match: A0A7S0BK00_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BK00_9RHOD)

HSP 1 Score: 95.5 bits (236), Expect = 3.190e-20
Identity = 58/150 (38.67%), Postives = 87/150 (58.00%), Query Frame = 0
Query:   83 QTAVARDDGLSMAAGQGFGTSVPEAGAEVEPTKGSGQTRAVSGSGLVSWEKEYKAYIKRTGKYLCSMSWEGHEEMGRGAIFANYDDA--RAEGKLNDAEKFGGIPSMYIPLKEFESMRAADRPGEEDDLAQIMHRVQTYRPETEFVVVFQ 230
            ++A  R   +SMA  +GFG     +  +V   + +GQ  A        WE EYKA++ R G+ +CSM ++G+  +GRGA+FANY  A  +AE  ++ A+    IPSMY+P+ + +   A+ RP +  DL  I  RV  Y PE +FVVVF+
Sbjct:   25 RSACRRSPVVSMA--KGFGKKNQSSEDKVPNPQSAGQVGA--------WEIEYKAFLNRNGRDICSMCYDGYRRLGRGAVFANYSKAMDKAESDIDLAQS---IPSMYVPMDKLKE-NASRRPSQGGDLKHITDRVANYNPEKQFVVVFE 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7728.15752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKQ0_ECTSI9.000e-5763.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CCX0_9STRA5.490e-3455.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WW30_9STRA6.670e-2445.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3EJF2_9RHOD1.020e-2238.31Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0BK00_9RHOD3.190e-2038.67Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 44..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 32..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 280..327
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..279
NoneNo IPR availableTMHMMTMhelixcoord: 250..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7728contigH-paniculata_contig7728:3696..6845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7728.15752.1mRNA_H-paniculata_contig7728.15752.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7728 3638..6879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7728.15752.1 ID=prot_H-paniculata_contig7728.15752.1|Name=mRNA_H-paniculata_contig7728.15752.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=328bp
MEMKPTTTPTSPTAMTNHRRNITAREAKRAPLATAAALCLAACCASLSDA
FTLPTYIHTRAMTRYQWALSRPTCRLGTRARAQTAVARDDGLSMAAGQGF
GTSVPEAGAEVEPTKGSGQTRAVSGSGLVSWEKEYKAYIKRTGKYLCSMS
WEGHEEMGRGAIFANYDDARAEGKLNDAEKFGGIPSMYIPLKEFESMRAA
DRPGEEDDLAQIMHRVQTYRPETEFVVVFQAAGVMGYETASWGTVRSSAL
LNAPGVSVYMFLFVVCVRIFGWCPTRYAWRTGKAMIYSFMEVLLIRDERS
RGIVVFGYSRPRLNCAARICSNAATYI*
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