prot_H-paniculata_contig7710.15730.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7710.15730.1
Unique Nameprot_H-paniculata_contig7710.15730.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1669
Homology
BLAST of mRNA_H-paniculata_contig7710.15730.1 vs. uniprot
Match: D8LI54_ECTSI (USP domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI54_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 2.810e-125
Identity = 485/1466 (33.08%), Postives = 608/1466 (41.47%), Query Frame = 0
Query:    1 MLMYRRVDPAINKRHLSRDEVPDHVRHQVLEQDRKAKEAVADAAAAAEALQSNVKIRVLLNGGPEEKTMNADKRKPLSELVECAAETFGVPLEAKAEPRLAEAKDGSKGLGLLGASLSDIATATAAEGNWTKGDTASAVGDISDEGDSGGGETDRETQDEGRSDGGGNGGDVNFVAGSAXXXXXXXXXAIIAEFIGVGEPTAAAAAQEVLPIVSG---KLVTGGSPSRCDSDTPDAGHAKNSNLDESTLSASASAAGAAVRPGLSLAETRNILAAEIAGMKVVDHEGDAAIPXXXXXXXXXXAGTRSPPTRLVRLREYLKETPKLAGAPLDESCTPGELYYMHGRTVWLETRKPEMPWPYYDRRDVNVSMVRFQRAVEIETDCAPMHGKINVSNIASSEAGVSEGGTVFGGIAAATRTGTSRLAVQAPLSAGRD--------LILSAPRRPRASLPVLGTFAPARVTRLKPSGTVREVREALSAFAGTVENRTRVFTMSPDNEESTYKVLCPPPCFVRRHRRPRSAAATVCTTRGSASEPSRQGERPSPHLLLPGTVGREFPADPPSGSVSTSCSRDGDESHGQNEHQPLRAVAVAGTVTGFTTA-------AXXXXXXXXXXXXXXXXXXAGVSTTTSDKALSSRTELPS--DGHPGTSATTALSASGGSLPRSTDLSGSSQEADTAAAEGAADGXXXXXXXDIVVLEDRGATFLHRVYVEEVSE-----EXXXEGGRSLAVKAATDDANRITIKLTLYDGIDGPSLMRADKRWSSDQLRDALATLIGRDSRSFKLRKATNHSPEVRRGAETLRDLTFYHNIPLHVSAGRPLELDEEALAILPLRVMYRTGLGWPAPPPSVLASLTRGRKRLNEYSIKGDALATSTDDGKGNVEGGQALVTTAPV--------------VRAGLVSIDSTDDNCISSGDQDDS----GIGSGARGAGGERGG--SSDI----RTSSSANAIEDADGEGEYETVRKQQSDNQAEGQDLSSLVLRALEFPPGEDDIAAAAASFSKHHGDGTTSTLAAA-----------VEPAPTVTTLSYSHPADGVSRIASSQSKIEVAEAARAAAAADLAQHEKNMSTLIKLIPCDSCWGENFTLPIKKNSTVAQVRVAVWQEMRRRGLIAAGHDDESSESPTTAASATSSDVAIYGTVGKTIEDPSRQPPESQQTQFKLAADRPLPGGSSPSALRLREKDRLKSYPVRIVRDTDGKLPRVTSVRPPAGSTRLLIAQALPGPENLGSV--------GREAVEENTAADTGDGGA-----------LGGESVAE---PSADARVVVVQWWDRWTWRLTEKYEAWVSPTETVAAARNRLASQVGVDPANLRAQKATHHARLCLRDLGGS-SAGGEQGMGEPSIE---TGGWTGN---NSCRWEDLDGSHANDLVGTDAFGDGDLLILQDVSQPLKELAAAVKSSMA 1377
            MLMYRRVDP+ NK H  R+EVPDHV  QV E  RK  E          AL   V  +V+LNGGPEE+T+  DKR+PL ELV+  AE FG+P  A + P   EA DG                          G+      D            DRE QDE RS                                   +P A      V  +  G   K  TGGS                                                             G  ++   XXXXXX  A T  PP RLVRLRE+L   P LAGAP DE  +P ELY+   + VWLETR+    WP +DR DVNV+++RF+ A                                    AA T      +AV+ P+    D         I      P A  PVLG F   R TR++ SGTVREVR A +AFAGT E RTRVF M  D+ E TY+VLCP                                                                      GQ   + L   A +  V GFTTA       A                   G+S +    A +   E+ +  +G  G +        GGS                         XXXX   ++VVL DRG+  + R+YVEEV E     +   E G SLAVK ATD  NRIT+ L L  GI+GP  M ADKRW+SDQLR+A+A  IG  +RSF+LRK   ++PE+R G ETL    FY+ I LHVS GRPLEL EEA+ + P+ V +R GLG PAP   VLA +  GR R    S    A+    ++G G  E G    TT  V                 G V+I  T      S D   +    G G G  G G  R    +SD+    R   +A    D+ G  E  T     S+          + L A E          A A F+      ++S +A               P         S P  GV+  A+        + A+A       + E   ST ++++P +S WGE F + + ++STV  +R AVW EMRRRGL   G                 S V     VG   E   R P     T   ++   PL  G +P ALRLRE  R    P  IVRD DGK+ R+ S   P  +  LL+AQ LP  E+LG          G          D+G G A            GG   A    P  DARV+VVQWW+RW WRLTEKYEAWVSPTETVA+AR RLA Q GV+PANL A +   +ARL L DL G+ S  G+   G P+ E   +G W G+   N C W DL+ S  +  VG  A  +G L++LQD SQPLK+LA A ++S+A
Sbjct:  702 MLMYRRVDPSQNKLHPRREEVPDHVARQVREHARKVAEXXXXXXXXXXALACTVTTKVVLNGGPEERTVKGDKRRPLRELVDRMAEAFGIPTVAVSAP---EAVDGG-------------------------GEAVRRGAD------------DREAQDERRS-----------------------------------KPAAVDHTGAVEVMEKGGTAKDDTGGS-------------------------------------------------------------GQQSVEAGXXXXXXPAAATPQPPDRLVRLREFLAG-PGLAGAPYDEDSSPAELYFSSHKKVWLETRRAGESWPRFDRDDVNVAVIRFEPA------------------------------------AATTAPAPPAVAVKKPIDENDDPLGVGGGKAIPXXXPLPTALFPVLGKFGVERNTRMRASGTVREVRAAFAAFAGTKEERTRVFAMRMDDPEGTYRVLCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------GQ---EGLSGSAASAPVVGFTTARALVEGTAGHLGGDPADPPLVAGVEERGMSVSACSGAAADEREVEAVEEGLAGDARF------GGSXXXXXXXXXXXXXXXXXXXXX----XXXXRESEVVVLGDRGSNIILRIYVEEVPEGGDAGDGDEEEGVSLAVKVATDQPNRITVTLDLTGGIEGPGRMSADKRWTSDQLREAIAQAIGCPNRSFRLRKCQGNTPEIRPGPETLAKKGFYNLIKLHVSPGRPLELHEEAVTVAPVDVGFRVGLG-PAPTSVVLA-IAAGRVRARSSSADSAAVK---EEGGGQQELGYGAATTEKVGVGDCRSLKFPEVDAEIGPVAICDTT-TAPPSADCSPTLGPVGEGRGVVGEGDNRPTVVASDLLLTLRGVGAATGGGDSSGGSEAPTASVSSSETGQTTPTNRGIALLASEECKTTPTDREAVAPFAPPSPPRSSSAVAXXXXXXXXXXXXXAHPGSAAVGTGAS-PEGGVAWAAAXXXXXXXXQDAKA-------ETEALTSTYVEVVPPESRWGEQFNVAVHRDSTVGDIRRAVWTEMRRRGLGPRGF----------------SAVGAAADVGNEEEKDDRLP-----TPGAVSTGHPLEEGWTPGALRLRE--RHVKLPATIVRDADGKVTRLRSR--PRDAPWLLVAQVLPREEDLGRPVFPQGGGGGGXXXXXXXXGDSGHGSAETXXXXXXXXXXGGADAARDDCPPQDARVIVVQWWNRWEWRLTEKYEAWVSPTETVASARRRLAEQAGVNPANLLANRCAPNARLRLFDLRGTASERGDGSGGSPAPEKQSSGTWGGSFSHNKCHWSDLEASRGDQPVGGSAISEGSLVLLQDSSQPLKQLAPATEASIA 1923          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7710.15730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI54_ECTSI2.810e-12533.08USP domain-containing protein (Fragment) n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1027..1047
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 35..702

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7710contigH-paniculata_contig7710:2131..9000 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7710.15730.1mRNA_H-paniculata_contig7710.15730.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7710 885..9968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7710.15730.1 ID=prot_H-paniculata_contig7710.15730.1|Name=mRNA_H-paniculata_contig7710.15730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1669bp
MLMYRRVDPAINKRHLSRDEVPDHVRHQVLEQDRKAKEAVADAAAAAEAL
QSNVKIRVLLNGGPEEKTMNADKRKPLSELVECAAETFGVPLEAKAEPRL
AEAKDGSKGLGLLGASLSDIATATAAEGNWTKGDTASAVGDISDEGDSGG
GETDRETQDEGRSDGGGNGGDVNFVAGSAAASSSSSPPAIIAEFIGVGEP
TAAAAAQEVLPIVSGKLVTGGSPSRCDSDTPDAGHAKNSNLDESTLSASA
SAAGAAVRPGLSLAETRNILAAEIAGMKVVDHEGDAAIPPPPPPPPPPPA
GTRSPPTRLVRLREYLKETPKLAGAPLDESCTPGELYYMHGRTVWLETRK
PEMPWPYYDRRDVNVSMVRFQRAVEIETDCAPMHGKINVSNIASSEAGVS
EGGTVFGGIAAATRTGTSRLAVQAPLSAGRDLILSAPRRPRASLPVLGTF
APARVTRLKPSGTVREVREALSAFAGTVENRTRVFTMSPDNEESTYKVLC
PPPCFVRRHRRPRSAAATVCTTRGSASEPSRQGERPSPHLLLPGTVGREF
PADPPSGSVSTSCSRDGDESHGQNEHQPLRAVAVAGTVTGFTTAAAFAVA
QAQEQEQVRVEVAAGVSTTTSDKALSSRTELPSDGHPGTSATTALSASGG
SLPRSTDLSGSSQEADTAAAEGAADGDEDDREDDIVVLEDRGATFLHRVY
VEEVSEEEEEEGGRSLAVKAATDDANRITIKLTLYDGIDGPSLMRADKRW
SSDQLRDALATLIGRDSRSFKLRKATNHSPEVRRGAETLRDLTFYHNIPL
HVSAGRPLELDEEALAILPLRVMYRTGLGWPAPPPSVLASLTRGRKRLNE
YSIKGDALATSTDDGKGNVEGGQALVTTAPVVRAGLVSIDSTDDNCISSG
DQDDSGIGSGARGAGGERGGSSDIRTSSSANAIEDADGEGEYETVRKQQS
DNQAEGQDLSSLVLRALEFPPGEDDIAAAAASFSKHHGDGTTSTLAAAVE
PAPTVTTLSYSHPADGVSRIASSQSKIEVAEAARAAAAADLAQHEKNMST
LIKLIPCDSCWGENFTLPIKKNSTVAQVRVAVWQEMRRRGLIAAGHDDES
SESPTTAASATSSDVAIYGTVGKTIEDPSRQPPESQQTQFKLAADRPLPG
GSSPSALRLREKDRLKSYPVRIVRDTDGKLPRVTSVRPPAGSTRLLIAQA
LPGPENLGSVGREAVEENTAADTGDGGALGGESVAEPSADARVVVVQWWD
RWTWRLTEKYEAWVSPTETVAAARNRLASQVGVDPANLRAQKATHHARLC
LRDLGGSSAGGEQGMGEPSIETGGWTGNNSCRWEDLDGSHANDLVGTDAF
GDGDLLILQDVSQPLKELAAAVKSSMASSDDGNVWSRNSSPRRGVVGGGD
TDGCDMASIGSWYAGGSTVADEVGGGAGSTSSSPLVHSSKSWAGTGGGSG
GASHFSAAGRSSITNSYKPKERALRIRTRRDRLQEGKNVAAAAAAAAAAV
AMAVAASSTSRTSSTTIVTTAPAATSAVVATSDGDAFVDIAAGAADAESG
NRVETGSAGSVSDATVVGGADPEGALSSGEDTVETAGLGNNNAGVDGGEH
GGGVVAGKGLPAAGIVDGCYEDLWGRLESDTCIGSLADGAEESSGVSLMH
SEAEVAERGGLEQFEDLV*
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