prot_H-paniculata_contig770.15715.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig770.15715.1
Unique Nameprot_H-paniculata_contig770.15715.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length592
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig770.15715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..214
NoneNo IPR availableCOILSCoilCoilcoord: 514..554
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 183..560
NoneNo IPR availablePANTHERPTHR14445:SF36GIGYF FAMILY PROTEIN CG11148coord: 183..560
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..591
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..33
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 115..132
e-value: 0.028
score: 14.2
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 252..280
score: 7.236
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 275..303
score: 7.346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig770contigH-paniculata_contig770:20212..27004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig770.15715.1mRNA_H-paniculata_contig770.15715.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig770 20034..28486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig770.15715.1 ID=prot_H-paniculata_contig770.15715.1|Name=mRNA_H-paniculata_contig770.15715.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=592bp
MTATTTYRLRRGKTALIICGVVVGTAAITFYVVRAWKRSPRDESAPRETR
DAQECNAPPHETGQNQQQKIQVSDESAIGDAFNPVRTRSEDASIEHEQHV
LLGDHTAAAAAAAAAAAVVLQSAWRRTLAAKNVHNMESTATTVVAATATA
AAAAAAATTQSARSSTRAAENAINILRITRDEEQEQHQQRRQQEQQQQEE
QQQQEEQQQQQEKVDAKVADDQERQKLAQVVMAQQYVRQCAAVANLRVSR
GECAVVRLQATFRGRATRTKLARWNNGVVRLQAQARGNAARSMVAEESRA
TRKTTWLGSENEVNRSSLLDCESALPTVTSTPTQSGNFRGPVVDNDELTV
DPKYNSGCYREPDLEPSGGAVGDEAVQFESLDDRERSDKWKALVSTLDKI
AKVNGILPGRGDLTAGTQGIEETEFYLVEGYPCPIGNKGYQATSVTTSII
QEVGTEEEWTVHAPFTSGKLVIANEEGVSFGDDAPETTQSLAGGGSNEGK
RTPAASVEDITARRVQIKAAVAAARAKAEDEEKEARWQREVAAAREAAKK
KRNKDRKKRRKKKGAGIRDEGLGSSGGELKGDAQPMAVTVC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS