prot_H-paniculata_contig7662.15660.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7662.15660.1
Unique Nameprot_H-paniculata_contig7662.15660.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length98
Homology
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 5.470e-8
Identity = 30/65 (46.15%), Postives = 37/65 (56.92%), Query Frame = 0
Query:   33 PAATGGDEQGRRRMDDAQVLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRVTQRLLNVTS 97
            P      E    ++  A+    LDL Q YWQ PL  E QE+FT+ T  GL+TPKRV Q +LN TS
Sbjct:  827 PGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATS 891          
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: A0A6A3FJ70_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJ70_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 3.490e-7
Identity = 22/46 (47.83%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   45 RMDDAQVLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRVTQ 90
            R+  AQ + K D+ + +WQ+PLDE+ QE+F++ TD+G++TP RV Q
Sbjct:  174 RVRGAQAMAKFDMFKGFWQLPLDEDSQEIFSIKTDEGVYTPTRVPQ 219          
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: A0A6A4G9J9_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G9J9_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 4.180e-6
Identity = 21/46 (45.65%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   45 RMDDAQVLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRVTQ 90
            R+  AQ + K D+ + +WQ+PL E+ QE+F++ TD+G++TP RV Q
Sbjct:  686 RVRGAQAMAKFDMFKGFWQLPLAEDSQEIFSIKTDEGVYTPTRVPQ 731          
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 7.860e-6
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 0
Query:   46 MDDAQVLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRV 88
            ++ AQV   LD  + YWQ+PL E+ QELFT +T +G++TP RV
Sbjct:  539 LEGAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRV 581          
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: A0A6G0SJ18_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SJ18_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 8.540e-6
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 0
Query:   46 MDDAQVLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRV 88
            ++ A+V+  LD  + YWQ+PL E+ QELFT +T +G++TP RV
Sbjct:   29 LEGAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRV 71          
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: A0A225WG09_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WG09_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.070e-5
Identity = 21/46 (45.65%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   45 RMDDAQVLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRVTQ 90
            R+  A+ + K DL + +WQ+PL E+ QE+F++ TD+G+FTP R+ Q
Sbjct:  122 RVRGAKAMAKFDLFKGFWQLPLAEDSQEVFSIKTDEGVFTPTRLPQ 167          
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: H3H5L7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5L7_PHYRM)

HSP 1 Score: 52.4 bits (124), Expect = 1.090e-5
Identity = 20/44 (45.45%), Postives = 34/44 (77.27%), Query Frame = 0
Query:   45 RMDDAQVLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRV 88
            +++D++    +D  + YWQ+PLDE+ QEL+T++T +G+FTP RV
Sbjct:  755 QVEDSEAYFTIDWWRGYWQLPLDEDSQELYTIMTHRGMFTPTRV 798          
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: A0A6A3GM82_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GM82_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.890e-5
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 0
Query:   46 MDDAQVLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRV 88
            ++ A+V+  LD  + YWQ+PL E+ QELFT +T +G++TP RV
Sbjct:  180 LEGAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRV 222          
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: A0A6A3VHD7_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VHD7_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.600e-5
Identity = 21/43 (48.84%), Postives = 31/43 (72.09%), Query Frame = 0
Query:   46 MDDAQVLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRV 88
            ++ A+V   LD  + YWQ+PL E+ QELFT +T +G++TP RV
Sbjct:   29 LEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRV 71          
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Match: A0A225V9E3_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V9E3_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.650e-5
Identity = 20/40 (50.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:   51 VLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRVTQ 90
            +  + DL+Q +WQ+PL  + QELF+ VT  G++TPKRV Q
Sbjct:  461 MFARFDLTQGFWQLPLHPDSQELFSFVTPDGVYTPKRVPQ 500          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7662.15660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE5.470e-846.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3FJ70_9STRA3.490e-747.83Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A4G9J9_9STRA4.180e-645.65Reverse transcriptase domain-containing protein n=... [more]
A0A2P4WWJ1_9STRA7.860e-651.16Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6G0SJ18_9STRA8.540e-648.84Reverse transcriptase domain-containing protein n=... [more]
A0A225WG09_9STRA1.070e-545.65Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
H3H5L7_PHYRM1.090e-545.45Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3GM82_9STRA1.890e-548.84Reverse transcriptase domain-containing protein (F... [more]
A0A6A3VHD7_9STRA2.600e-548.84Reverse transcriptase domain-containing protein n=... [more]
A0A225V9E3_9STRA2.650e-550.00Reverse transcriptase domain-containing protein (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..97
NoneNo IPR availableGENE3D3.30.70.270coord: 45..94
e-value: 6.5E-7
score: 30.9
NoneNo IPR availableGENE3D3.10.10.10coord: 67..93
e-value: 6.5E-7
score: 30.9
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 46..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7662contigH-paniculata_contig7662:498..807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7662.15660.1mRNA_H-paniculata_contig7662.15660.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7662 384..951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7662.15660.1 ID=prot_H-paniculata_contig7662.15660.1|Name=mRNA_H-paniculata_contig7662.15660.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
MVLVSSCSRTMLGHDVSLKTRGALVGLSSSEQPAATGGDEQGRRRMDDAQ
VLCKLDLSQRYWQMPLDEEGQELFTMVTDQGLFTPKRVTQRLLNVTS*
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