prot_H-paniculata_contig7658.15652.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7658.15652.1
Unique Nameprot_H-paniculata_contig7658.15652.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length282
Homology
BLAST of mRNA_H-paniculata_contig7658.15652.1 vs. uniprot
Match: D7FYY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY5_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 1.600e-73
Identity = 200/284 (70.42%), Postives = 221/284 (77.82%), Query Frame = 0
Query:    1 SFVFFQPRQLSRLCWALGAWHEQGVV-LPGAGEFAARALAETGRNSRDYATEELAQVVLWAFATLVGNADSTGQELAGLVGALTAGFELEGSDDDYYYASGGTXXXXXXXXXXXXXXXXXXSGVAR-GGLDAATACDVLWSLATMGYPAHRLCEAMGRTLVDQVQDLPPSSVASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTVSLKRQFHVQMEGIRSLNPSEVSKLFWGLVKTEAVFADGFERECLESIAADMGPKLLSFSPR 282
            SF  FQPRQLSRLCWALGAWH +G V L G+  FAAR+L+E G++ ++Y  EELAQV LWAFATLVG ADS   ELAGLVGAL  GFE EG+                     XXXXXXX S   R GGLDAATACDVLWS ATMG+PAH LCEAM R LV++V +LPPSSV+ LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YTVSLKRQF V  + + SL+PS  + L WGLVKTEA FADGF+RECLE++AADMGPKLLSFSPR
Sbjct:  783 SFQHFQPRQLSRLCWALGAWHGRGSVKLLGSDIFAARSLSEAGQHPKEYTAEELAQV-LWAFATLVGKADSPAHELAGLVGALAEGFETEGA-----------------RGMGXXXXXXXVSAAGREGGLDAATACDVLWSFATMGHPAHSLCEAMARDLVNKVPELPPSSVSQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYTVSLKRQFDVTKDDLTSLSPSASANLLWGLVKTEAAFADGFDRECLEAVAADMGPKLLSFSPR 1048          
BLAST of mRNA_H-paniculata_contig7658.15652.1 vs. uniprot
Match: A0A6H5JR07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR07_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 5.450e-64
Identity = 146/300 (48.67%), Postives = 169/300 (56.33%), Query Frame = 0
Query:    1 SFVFFQPRQLSRLCWALGAWHEQGVV-LPGAGEFAARALAETGRNSRDYATEELAQV------------VLWAFATLVGNADSTGQELAGLVGALTAGFELEGSDDDYYYASGGTXXXXXXXXXXXXXXXXXXSGVAR-GGLDAATACDVLWSLATMGYPAHRLCEAMGRTLVDQVQ----DLPPSSVASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTVSLKRQFHVQMEGIRSLNPSEVSKLFWGLVKTEAVFADGFERECLESIAADMGPKLLSFSPR 282
            SF  FQPRQLSRLCWALGAW+ +G V LPG+  F AR+L+E G++ ++Y  EELAQ             VLWAFATLVG ADS  QELAGLVGAL  GFE EG+        GG XXX               S   R GGLDAATACDVLWS AT+G+PAH LCEAM R L+  V+    +      AS                                              YTVSLKRQF +  + + SL+PS  + L WGLVKTEA FADGF+RECLE++AADMGPKLLSFSPR
Sbjct:  680 SFQHFQPRQLSRLCWALGAWNGRGSVKLPGSDVFVARSLSEAGQHPKEYTAEELAQARRQRRRGGGVVRVLWAFATLVGKADSPAQELAGLVGALAEGFETEGARG---MGGGGXXXXV--------------SAAGREGGLDAATACDVLWSFATLGHPAHSLCEAMARDLLSVVERRLDEFTVEEAASALWALGALG-------------------------------------YTVSLKRQFDLTKDDLTSLSPSASANLLWGLVKTEAAFADGFDRECLEAVAADMGPKLLSFSPR 925          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7658.15652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYY5_ECTSI1.600e-7370.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR07_9PHAE5.450e-6448.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21228:SF40TRANSFORMING GROWTH FACTOR BETA REGULATOR 4coord: 97..251
NoneNo IPR availablePANTHERPTHR21228FAST LEU-RICH DOMAIN-CONTAININGcoord: 97..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7658contigH-paniculata_contig7658:1604..11028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7658.15652.1mRNA_H-paniculata_contig7658.15652.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7658 1604..11028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7658.15652.1 ID=prot_H-paniculata_contig7658.15652.1|Name=mRNA_H-paniculata_contig7658.15652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
SFVFFQPRQLSRLCWALGAWHEQGVVLPGAGEFAARALAETGRNSRDYAT
EELAQVVLWAFATLVGNADSTGQELAGLVGALTAGFELEGSDDDYYYASG
GTGGSGGSGGVSSVGGGGGGSGVARGGLDAATACDVLWSLATMGYPAHRL
CEAMGRTLVDQVQDLPPSSVASLAWAYAKMGHPSSELMERLLSVVERRID
EFSVEDAARALWALGSLGYTVSLKRQFHVQMEGIRSLNPSEVSKLFWGLV
KTEAVFADGFERECLESIAADMGPKLLSFSPR
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