prot_H-paniculata_contig7635.15628.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7635.15628.1
Unique Nameprot_H-paniculata_contig7635.15628.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length609
Homology
BLAST of mRNA_H-paniculata_contig7635.15628.1 vs. uniprot
Match: D8LBZ5_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ5_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.090e-21
Identity = 74/160 (46.25%), Postives = 97/160 (60.62%), Query Frame = 0
Query:  438 DVKDARCVCLHQPMVLRGIQGRRYLQMGTELQDGDGDEL-FDDKASATTA-------RSGGSSTTTGLSGEGDQKTFYSVETDAKGKGQAGEVVLFVKASVKGDRGPLVYGEGVGIRSA-ASSKFLRPLKSGGVVFMSKFLNQGETWVVLPHDPSSGGPS 588
            DV+D RCVCLHQP++LRG QGR YLQ+  E Q+ +GDE  FDD AS  TA       + GG++   GL   G+ KT + V  +  G G   EVV FV AS +GDRGP+VYG+ V I+S     K+LR   SG + F ++F+ +GE  + L H   SG  S
Sbjct:  346 DVQDVRCVCLHQPVLLRGSQGR-YLQVSKEEQEAEGDEEDFDDNASIVTAVTAISGDKVGGAAGGGGLIA-GELKTLFGVSAEGTGTGDPSEVVNFVSASQRGDRGPVVYGQSVCIKSVHGKGKYLRVSSSGALAF-ARFVRKGER-IELEHTEYSGARS 501          
BLAST of mRNA_H-paniculata_contig7635.15628.1 vs. uniprot
Match: A0A6H5K2G1_9PHAE (Spindle pole body component n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2G1_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 5.730e-15
Identity = 74/191 (38.74%), Postives = 95/191 (49.74%), Query Frame = 0
Query:  438 DVKDARCVCLHQPMVLRGIQGRRYLQMGTELQDGDGDEL-FDDKAS---ATTARSG---GSSTTTGLSGEGDQKTFYSVETDAKGKGQAGEVVLFVKASVKGDR--------------------------------GPLVYGEGVGIRSA-ASSKFLRPLKSGGVVFMSKFLNQGETWVVLPHDPSSGGPS 588
            D +D RCVCLHQP++LRG QGR YLQ+  E ++ +GDE  FDD AS   A TA SG   G  T  G    G+ KT + V  +  G G   EVV FV AS +GDR                                GP+VYG+ V I+S     K+LR   SG + F ++F+ +GE  + L H   SG  S
Sbjct:  312 DEQDVRCVCLHQPVLLRGSQGR-YLQVSKEEEEVEGDEEDFDDNASIVTAVTAISGDKVGGGTGGGGLIAGELKTLFRVSAEGTGTGDPSEVVHFVSASQRGDRARLRGAIDQLPGVLIHGQSFPAMSSPLSRRYQGPVVYGQSVCIKSVHGKGKYLRVSSSGALAF-ARFVRKGER-IELEHTEYSGARS 499          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7635.15628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBZ5_ECTSI1.090e-2146.25Spindle pole body component n=1 Tax=Ectocarpus sil... [more]
A0A6H5K2G1_9PHAE5.730e-1538.74Spindle pole body component n=1 Tax=Ectocarpus sp.... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7635contigH-paniculata_contig7635:647..9960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7635.15628.1mRNA_H-paniculata_contig7635.15628.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7635 647..10078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7635.15628.1 ID=prot_H-paniculata_contig7635.15628.1|Name=mRNA_H-paniculata_contig7635.15628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=609bp
MNNRDRYDRGTQRQSSPGRRRRESANSTGQGLTLDLVKDLAKLRDNEPHR
FPAAYERLKAMIPDLDNLITVYPPGAPPSVAGEGSSSYLGGSSFGDGRTT
TSSFLSSPPHPVSTSGAIGTSGAAPRAGGASSSSSRSNQHPRASFSASPG
VSGRKGVGSGGTYYRNSNNNNKNYDPLEISSISGIPRFDDDENNTSYLAA
DDVLLRARASRGGANENTRAGSAGNTIRPGRTRGISPAGSTTETYNGGRS
RSTDPNQRGTTAAYIPTSGGGSGGRAVYYSGLEGGDDGGVGAVGAGEVSR
SPSTRPLSSERRPRSSSNSRRSAAATGDAPGASAEIVPYSSATMPISDSF
PEGGRTAAASVAAGPSLTSTPEGSQRLWGAGDDKNVSRSGDYGDANGNSF
GSGGGVGGGNGVRASGKSEGDSIQDMLSTLPSKPPEQDVKDARCVCLHQP
MVLRGIQGRRYLQMGTELQDGDGDELFDDKASATTARSGGSSTTTGLSGE
GDQKTFYSVETDAKGKGQAGEVVLFVKASVKGDRGPLVYGEGVGIRSAAS
SKFLRPLKSGGVVFMSKFLNQGETWVVLPHDPSSGGPSSFEARAGRRGPV
GDDGNAAGG
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