prot_H-paniculata_contig763.15624.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig763.15624.1
Unique Name	prot_H-paniculata_contig763.15624.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	205

Homology

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: D8LJX1_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX1_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 6.970e-61
Identity = 97/125 (77.60%), Postives = 103/125 (82.40%), Query Frame = 0

Query:    1 MNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHK---ADGSNS---CPFGSKCFYAHLDETGVDVKDRAAPPAAAAPRRACPYMQRNG 119
            +NCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGK K+KAIQ YKKGLSKLPCKYHK   A G  +   CPFGS+CFYAHLDE G DVKDRA P   A  RR CPY++  G
Sbjct:  186 LNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKLKAIQAYKKGLSKLPCKYHKPGKASGGGTTTVCPFGSRCFYAHLDENGNDVKDRATPAPPAPLRRTCPYLRAGG 310

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: A0A6H5JI27_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI27_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 8.890e-61
Identity = 97/125 (77.60%), Postives = 104/125 (83.20%), Query Frame = 0

Query:    1 MNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHK---ADGSNS---CPFGSKCFYAHLDETGVDVKDRAAPPAAAAPRRACPYMQRNG 119
            +NCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGK K+KAIQ YK+GLSKLPCKYHK   A G  +   CPFGS+CFYAHLDE G DVKDRA P A A  RR CPY++  G
Sbjct:  188 LNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKLKAIQAYKQGLSKLPCKYHKPGNASGGGTTTVCPFGSRCFYAHLDEHGNDVKDRATPAAPAPLRRTCPYLRAGG 312

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: A0A024GLX5_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLX5_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.510e-28
Identity = 56/96 (58.33%), Postives = 64/96 (66.67%), Query Frame = 0

Query:    3 CDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHKADGS-NSCPFGSKCFYAHLDETGVDVK 97
            CDH +C ECL  WR+SK    +++RTCPECR+ SFF+VPS    KG EK  AI+ YK  L K  CKY   DG   SCPFG  CFYAHLDE G DVK
Sbjct:  173 CDHCFCTECLCEWRRSKDLDVEVTRTCPECRQPSFFIVPSITFCKGIEKEHAIRAYKHHLGKRKCKYF--DGMFGSCPFGQHCFYAHLDEDGRDVK 266

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: F0WK19_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WK19_9STRA)

HSP 1 Score: 116 bits (290), Expect = 9.970e-28
Identity = 55/96 (57.29%), Postives = 64/96 (66.67%), Query Frame = 0

Query:    3 CDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHKADGS-NSCPFGSKCFYAHLDETGVDVK 97
            CDH +C+ECL  WR+SK    +++RTCPECR+ SFF+VPS    KG EK  AI  YK  L K  CKY   DG   SCPFG  CFYAH+DE G DVK
Sbjct:  183 CDHCFCMECLGEWRRSKDLDVEVTRTCPECRQPSFFIVPSITFCKGIEKQHAIVAYKHHLGKRNCKYF--DGMFGSCPFGQHCFYAHVDENGHDVK 276

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: D0NJD4_PHYIT (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJD4_PHYIT)

HSP 1 Score: 111 bits (277), Expect = 3.010e-26
Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 0

Query:    1 MNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHKADGSNSCPFGSKCFYAHLDETGVDVKDRAAPPAAAAPRR 110
            ++CDH +CL+CLR+WR+SK  + ++ R CP CR  S F+VPS   + G+EK KA++ YK  L+   CKY       SCPFG +CFYAH D  G DVK    P  +  PRR
Sbjct:  111 LHCDHCFCLDCLRSWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGEEKRKAVEAYKSHLALRECKYFNGL-FGSCPFGPRCFYAHRDSEGRDVKHLDRPKRSTKPRR 219

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: W2MJ97_PHYPR (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MJ97_PHYPR)

HSP 1 Score: 110 bits (275), Expect = 4.830e-26
Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 0

Query:    1 MNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHKADGSNSCPFGSKCFYAHLDETGVDVKDRAAPPAAAAPRR 110
            ++CDH +CL+CLR+WR+SK  + ++ R CP CR  S F+VPS   + G+EK K I+ YK  L+   CKY       SCPFG +CFYAH D  G DVK    P  +  PRR
Sbjct:  105 LHCDHCFCLDCLRSWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGEEKQKVIEAYKSHLALRECKYFNGL-FGSCPFGPRCFYAHRDSEGRDVKHLDRPKRSTKPRR 213

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: A0A833T7U2_PHYIN (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T7U2_PHYIN)

HSP 1 Score: 111 bits (277), Expect = 1.320e-25
Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 0

Query:    1 MNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHKADGSNSCPFGSKCFYAHLDETGVDVKDRAAPPAAAAPRR 110
            ++CDH +CL+CLR+WR+SK  + ++ R CP CR  S F+VPS   + G+EK KA++ YK  L+   CKY       SCPFG +CFYAH D  G DVK    P  +  PRR
Sbjct:  196 LHCDHCFCLDCLRSWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGEEKRKAVEAYKSHLALRECKYFNGL-FGSCPFGPRCFYAHRDSEGRDVKHLDRPKRSTKPRR 304

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: H3GG35_PHYRM (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GG35_PHYRM)

HSP 1 Score: 110 bits (275), Expect = 2.980e-25
Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 0

Query:    1 MNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHKADGSNSCPFGSKCFYAHLDETGVDVKDRAAPPAAAAPRR 110
            ++CDH +CL+CLR+WR+SK  + ++ R CP CR  S F+VPS    KG+EK K ++ YK  L+   CKY       SCPFG +CFYAH D  G DVK    P  +  PRR
Sbjct:  206 LSCDHCFCLDCLRSWRQSKDMELEVIRACPACRVPSDFIVPSLIFCKGEEKRKVVEAYKSHLALRECKYFNGL-FGSCPFGPRCFYAHRDGEGRDVKHLDRPKRSTKPRR 314

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: G4YZV9_PHYSP (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZV9_PHYSP)

HSP 1 Score: 109 bits (273), Expect = 3.520e-25
Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = 0

Query:    1 MNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHKADGSNSCPFGSKCFYAHLDETGVDVKDRAAPPAAAAPRR 110
            ++CDH +CL+CLR WR+SK  + ++ R CP CR  S F+VPS    KG+EK K ++ YK  L+   CKY       SCPFG +CFYAH D  G DVK    P  +  PRR
Sbjct:  170 LSCDHCFCLDCLREWRQSKDMELEVIRACPACRVPSDFIVPSLIFCKGEEKRKVVEAYKSHLALRECKYFNGL-FGSCPFGPRCFYAHRDAEGRDVKHLDRPKRSMKPRR 278

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BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Match: A0A2P4XA11_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XA11_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.440e-25
Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 0

Query:    1 MNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKEKVKAIQEYKKGLSKLPCKYHKADGSNSCPFGSKCFYAHLDETGVDVKDRAAPPAAAAPRR 110
            ++CDH +CL+CLR WR+SK  + ++ R CP CR  S F+VPS   + G EK K ++ YK  L+   CKY       SCPFG +CFYAH D  G DVK    P  ++ PRR
Sbjct:  124 LSCDHCFCLDCLRVWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGDEKRKVVEVYKSHLALRECKYFNGL-FGSCPFGPRCFYAHRDSQGRDVKHLDRPKRSSKPRR 232

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig763.15624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LJX1_ECTSI	6.970e-61	77.60	RING-type E3 ubiquitin transferase n=1 Tax=Ectocar...	[more]
A0A6H5JI27_9PHAE	8.890e-61	77.60	RING-type E3 ubiquitin transferase n=1 Tax=Ectocar...	[more]
A0A024GLX5_9STRA	3.510e-28	58.33	RING-type E3 ubiquitin transferase n=1 Tax=Albugo ...	[more]
F0WK19_9STRA	9.970e-28	57.29	RING-type E3 ubiquitin transferase n=1 Tax=Albugo ...	[more]
D0NJD4_PHYIT	3.010e-26	47.27	RING-type E3 ubiquitin transferase n=1 Tax=Phytoph...	[more]
W2MJ97_PHYPR	4.830e-26	47.27	RING-type E3 ubiquitin transferase n=1 Tax=Phytoph...	[more]
A0A833T7U2_PHYIN	1.320e-25	47.27	RING-type E3 ubiquitin transferase n=1 Tax=Phytoph...	[more]
H3GG35_PHYRM	2.980e-25	47.27	RING-type E3 ubiquitin transferase n=1 Tax=Phytoph...	[more]
G4YZV9_PHYSP	3.520e-25	47.27	RING-type E3 ubiquitin transferase n=1 Tax=Phytoph...	[more]
A0A2P4XA11_9STRA	4.440e-25	46.36	RING-type E3 ubiquitin transferase n=1 Tax=Phytoph...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 1..64 e-value: 9.9E-8 score: 33.6
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 2..32 e-value: 7.1E-5 score: 22.6
None	No IPR available	PANTHER	PTHR11224:SF10	IP09428P-RELATED	coord: 2..99
None	No IPR available	PANTHER	PTHR11224	MAKORIN-RELATED	coord: 2..99
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 2..39
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 3..12
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 3..33 score: 9.229
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 61..91 score: 11.958

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig763	contig	H-paniculata_contig763:27332..30245 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig763.15624.1	mRNA_H-paniculata_contig763.15624.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig763 27164..30406 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig763.15624.1 ID=prot_H-paniculata_contig763.15624.1|Name=mRNA_H-paniculata_contig763.15624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKE
KVKAIQEYKKGLSKLPCKYHKADGSNSCPFGSKCFYAHLDETGVDVKDRA
APPAAAAPRRACPYMQRNGVPAGGARSSAGRGGRGGRSRVPIGTQPTFAA
IAAIPMGRFQSDAEWGDIAEFERIGERMRLDHLTFIAEISQLERELELRR
GRGP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR018957	Znf_C3HC4_RING-type
IPR017907	Znf_RING_CS
IPR001841	Znf_RING
IPR000571	Znf_CCCH