prot_H-paniculata_contig7628.15620.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7628.15620.1
Unique Nameprot_H-paniculata_contig7628.15620.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length334
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7628.15620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 194..218
e-value: 0.0012
score: 28.1
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 196..215
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 192..215
score: 8.039
NoneNo IPR availableGENE3D2.20.28.140coord: 189..242
e-value: 8.1E-6
score: 27.5
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 194..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7628contigH-paniculata_contig7628:2143..5286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7628.15620.1mRNA_H-paniculata_contig7628.15620.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7628 2143..5288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7628.15620.1 ID=prot_H-paniculata_contig7628.15620.1|Name=mRNA_H-paniculata_contig7628.15620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp
DAVLSTHSCVYTHDLDKGEKWVITDNCGAIINRPKEIGEQVQGEIDVSAN
DQGRAGIVFKAGIDVIFQRTLTLRAGQTKILYPDDKLQFDYGDARTVYVV
ASSVHDGAPATMSLQEFSNRKLNSNPKDSDGDMGVVDKMSGPPEDRRVAR
TDMKESEVMDDEDSEDADYEDGMADAETQDEGAVEGASSTEQLPEWECQH
CTFVNFSHSTACEVCYKTTYHKVDRSKRVRCQPSRYRDEQALSILVPTTS
SSKCRKSGGQVAREKRSAADEASTNSDAGSGREEMETSVTGDAVSDDDGA
SGGGEQVHDESSAAGQSRAVAGDRRSTRQRGTRC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf