prot_H-paniculata_contig7625.15618.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7625.15618.1
Unique Nameprot_H-paniculata_contig7625.15618.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 5.740e-55
Identity = 82/173 (47.40%), Postives = 119/173 (68.79%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLVL 173
            S+L ALGEKCRP+C+G T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++ HQ  HW++  DC+N FN+ KR  I+ + +   P L  ++A+CY+E PA  I+ MD+G+RR I   +G+ Q DG+GP LFC  + PI+ K R +++ L V L AY+DD+ L
Sbjct:   70 SSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISL 242          
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 8.220e-52
Identity = 81/172 (47.09%), Postives = 120/172 (69.77%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLV 172
            S+L ALGEKCRP+C+G T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++ HQ  HW++  DC+N FN+ KR  I+ + +   P L  ++A+CY+E PA  I+ MD+G+RR I   +G+ Q DG+GP LFC  + PI+ K R ++++L V L AY+DD++
Sbjct:   69 SSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDII 240          
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.250e-51
Identity = 82/173 (47.40%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLVL 173
            S+L ALGEKCRP+C+G T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++ HQ  HW++  DC+N FN+ KR  I+ + +   P L  ++A+CY+E PA  I+ MD+G RR I    G+ Q DG+GP LFC  + PI+ K R +++ L V L AY+DD+ L
Sbjct:  160 SSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISL 332          
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 9.010e-51
Identity = 83/173 (47.98%), Postives = 119/173 (68.79%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLVL 173
            S+L ALGEKCRP+C+G T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++ HQ  HW++  DC+N FN+ KR  I+ + S   P L  ++A+CY+E PA  I+ MD+G+RR I   +G+ Q DG+GP LFC  + PI+ K R +++ L V L AY+DD+ L
Sbjct:  437 SSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISL 609          
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.540e-50
Identity = 80/173 (46.24%), Postives = 118/173 (68.21%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLVL 173
            S+L ALGEKCRP+C+G T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++ HQ  HW++  DC++ FN+ KR  I+ + +   P +  ++A+CY+E PA  I+ MD+G+RR I   +G+ Q DG+GP LFC  + PI+ K R  ++ L V L AY+DD+ L
Sbjct:   62 SSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISL 234          
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 4.350e-50
Identity = 82/173 (47.40%), Postives = 119/173 (68.79%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLVL 173
            S+L ALGEKCRP+C+G T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++ HQ  HW++  DC+N FN+ KR  I+ + +   P L  ++A+CY+E PA  I+ MD+G+RR I   +G+ Q DG+GP LFC  + PI+ K R +++ L V L AY+DD+ L
Sbjct:  459 SSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISL 631          
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 6.750e-50
Identity = 82/173 (47.40%), Postives = 119/173 (68.79%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLVL 173
            S+L ALGEKCRP+C+G T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++ HQ  HW++  DC+N FN+ KR  I+ + +   P L  ++A+CY+E PA  I+ MD+G+RR I   +G+ Q DG+GP LFC  + PI+ K R +++ L V L AY+DD+ L
Sbjct:  438 SSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISL 610          
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 1.340e-49
Identity = 80/173 (46.24%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLVL 173
            S+L ALGEKCRP+C+G T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++ HQ  HW++  DC+N FN+ KR  I+ + +   P L  ++A+CY+E  A  I+ MD+G+RR I   +G+ Q DG+GP LF   + PI+ K R +++ L V L AY+DD+ L
Sbjct:   26 SSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISL 198          
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 8.340e-49
Identity = 80/173 (46.24%), Postives = 115/173 (66.47%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLVL 173
            S+L ALGEKCRP+C+G T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++  Q  HW++  DC+N  N+ KR  I+ + +   P L   +A+CYE  PA  I+ MD+G+RR I   +G+ Q DG+GP LFC  + PI+ K R +++ L V L AY+DD+ L
Sbjct:  115 SSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCYE-LPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISL 286          
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Match: A0A6H5KUZ8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ8_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.990e-48
Identity = 80/173 (46.24%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    1 SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVSGGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTPFVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPILRKCREQFEDLRVGLLAYLDDLVL 173
            S+L ALGEKCRP+C+  T RR +AAG VR ++PKLEE+     Q+GVAV+GG E + + A++ HQ  HW++  DC+N FN+ KR  I+ + +   P L  ++A+CY+E PA  I+ MD+G+RR I   +G+ Q DG+GP L C  + PI+ K R +++ L V L AY+DD+ L
Sbjct:   26 SSLIALGEKCRPVCIEMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLSCFILVPIVLKLRAKYDHLGVCLKAYMDDISL 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7625.15618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Y4_9PHAE5.740e-5547.40Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE8.220e-5247.09Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KR59_9PHAE1.250e-5147.40Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE9.010e-5147.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE2.540e-5046.24Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE4.350e-5047.40Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE6.750e-5047.40Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDD0_9PHAE1.340e-4946.24Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE8.340e-4946.24Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KUZ8_9PHAE1.990e-4846.24Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 9..173
e-value: 9.0E-11
score: 41.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..173
score: 11.151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7625contigH-paniculata_contig7625:298..816 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7625.15618.1mRNA_H-paniculata_contig7625.15618.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7625 298..816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7625.15618.1 ID=prot_H-paniculata_contig7625.15618.1|Name=mRNA_H-paniculata_contig7625.15618.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
SNLTALGEKCRPICVGCTMRRTLAAGVVRHYRPKLEEVNLSERQYGVAVS
GGAELMGLRAKVHHQLRHWLIALDCTNTFNSVKRAEILEEVSIRTPGLTP
FVAKCYEEKPADIIFQMDTGDRRKISSNTGIHQSDGLGPALFCMPVEPIL
RKCREQFEDLRVGLLAYLDDLVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom