prot_H-paniculata_contig762.15614.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig762.15614.1
Unique Nameprot_H-paniculata_contig762.15614.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length240
Homology
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 179 bits (454), Expect = 9.800e-52
Identity = 97/239 (40.59%), Postives = 142/239 (59.41%), Query Frame = 0
Query:    1 MKDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTLVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEEFVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK 239
            +K+LG      GIE+ R+R + TI  +Q +YI  + +++G ++C+ V T  +   K++ P S D+   P+           YR +VG+LMY +T TRPDIA AV + A+  E   +  +   KR  +YL T  DLG+ F G + G  L  + D +WA D++ R+STTGYVF LNG AI W S++Q  V  SSTEAEY+A   A +E ++LR+LL  +G  C G+TT F+ N+  I L K
Sbjct:   23 IKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKP-SEDEDFVPRY---------PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAK 250          
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 177 bits (450), Expect = 3.490e-51
Identity = 91/239 (38.08%), Postives = 136/239 (56.90%), Query Frame = 0
Query:    1 MKDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTLVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEEFVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK 239
            + D+G    V G+ +RRDR  G +T SQ +Y+  +LKR+G ++C+ V T +E           + P+          N+ EY+ ++G L Y +T TRPD+A AV   ++ M  P +E +   KR  RY+    + G+ F GKS    L  + D DWA D++ R+ST+GYVF++NG  + WCS++Q  VT S+TEAEYVA   A +E ++LR LL  IG      + + E N+ AI L K
Sbjct:   15 VDDMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPT----------NTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSK 243          
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL)

HSP 1 Score: 179 bits (454), Expect = 1.080e-50
Identity = 96/240 (40.00%), Postives = 137/240 (57.08%), Query Frame = 0
Query:    1 MKDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPT-LVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEEFVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK 239
            MKD+G P ++ GIEV RDR  GT+T SQ  YI  +L RYGF     V T LV      +     D P    S+ A      EY+ ++G LMYA+  TRPDIAYAV + ++   +P  E  + CKR FRYLS   + G+ +G + +G   E + D D+A +++DRKS +GY + L G A  W S+KQ  V  S+TEAE+ +  +A +  M+ R L   IG+    +T L+  N+SA+ L +
Sbjct:  112 MKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPKDAPPAAPSVRA------EYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQRDGVVFEGYCDADYAANLDDRKSISGYAYMLAGAAFAWSSKKQTTVATSTTEAEFTSLAQAARFAMWCRNLFAGIGYSQDDATVLYGDNQSALKLTR 345          
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 176 bits (445), Expect = 2.320e-49
Identity = 95/239 (39.75%), Postives = 141/239 (59.00%), Query Frame = 0
Query:    1 MKDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTLVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEEFVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK 239
            +K+LG      GIE+ R+R + TI  +Q +YI  + +++G ++C+ V T  +   K++ P + D+   P+           YR +VG+LMY +T TRPDIA AV + A+  E   +  +   KR  +YL T  DLG+ F G + G  L  + D  WA D++ R+STTGYVF LNG AI W S++Q  V  SSTEAEY+A   A +E ++LR+LL  +G  C  +TT+F+ N+  I L K
Sbjct:  119 IKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKP-AEDEVFVPRY---------PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAK 346          
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: H3H7M7_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7M7_PHYRM)

HSP 1 Score: 182 bits (462), Expect = 5.550e-49
Identity = 98/239 (41.00%), Postives = 143/239 (59.83%), Query Frame = 0
Query:    1 MKDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTLVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEEFVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK 239
            +K+LG      GIE+ R+R + TI  +Q +YI  + + +G ++C+ V T  +   K++ P S D+   P+           YR +VG+LMY +T TRPDIA AV + A+  E   +  +   KR  +YL T PDLG+ F G + G  L  + D +WA D++ R+STTGYVF LNG AI W S++Q  V  SSTEAEY+A   A +E ++LR+LL  +G  C G+TT+F+ N+  I L K
Sbjct:  888 IKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEEFGVEKCKAVHTPADSNSKLVKP-SEDEDFVPRY---------PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTPDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAK 1115          
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 173 bits (439), Expect = 2.640e-47
Identity = 94/239 (39.33%), Postives = 138/239 (57.74%), Query Frame = 0
Query:    1 MKDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTLVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEEFVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK 239
            M DLG    + G+E++RDR   TI+  Q +YI  +L R+   + + + T ++    +   +S   PS P+    +R+    YR  +GSLMYA+ GTRPD++YAV   ++ M++P    +   KR  RYL    +  +T+GG  N +G+E F D DW    + R+S +GYVF ++GGA+ W S+KQ +V  SSTEAEYVA   A KE ++ R  LG I       TTL+  N+SAI L K
Sbjct:  254 MTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQS---PSTPQQYDDMRN--ILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAK 485          
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: A0A8H6XNZ2_9AGAR (Uncharacterized protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6XNZ2_9AGAR)

HSP 1 Score: 177 bits (448), Expect = 4.310e-47
Identity = 96/240 (40.00%), Postives = 137/240 (57.08%), Query Frame = 0
Query:    2 KDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTLVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEE--FVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK 239
            KDLG P ++ GIE+RRDR +GTIT SQ  Y+  +L +YG  + + + T ++  +  L    AD P  P  L        +Y+ I+G LMYA+  TRPDIAYAV   ++   +P  E +S CKR  RYLS   + G+ +G  S+   +    + D D+A +V+DRKS +GY F L G A  W S+KQ  V  SSTEAEY A   A +  ++ R L   IG+    ST + E N++A+ L +
Sbjct: 1118 KDLGEPRKIIGIEIRRDRGSGTITLSQLHYVETLLAKYGLTDAKPLATPMDPNV-TLRKVPADAPEAPAELRG------QYQSIIGGLMYAAICTRPDIAYAVTTLSQYCSNPGPEHWSACKRVLRYLSGTRNYGLVYGNTSDSDEIVSTGYSDADYAANVDDRKSISGYAFMLGGAAYAWSSKKQSTVATSSTEAEYTALAHATRFAVWSRYLFSEIGYAQTSSTIIHEDNQAALALAR 1350          
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: A0A409WUQ4_9AGAR (Uncharacterized protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WUQ4_9AGAR)

HSP 1 Score: 176 bits (446), Expect = 8.090e-47
Identity = 97/240 (40.42%), Postives = 145/240 (60.42%), Query Frame = 0
Query:    1 MKDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTLVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEEFVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCR-GSTTLFEGNKSAINLRK 239
            + D+G    + GIEV R+R   T+  SQ SYIH +++RYGF++ + V   ++  +++   +S   P   +   A+R+    YR  +GSLMYA+ GTRPDIAYAV   +R   +P    +   KR FRYL    DL +++G + +   L  F D D +   EDR + TGY F +NGGA+ W +++Q++++ S+TE+EYVAA  A KE ++LR LL  I FG +  + TLF  N+SAI L K
Sbjct: 1265 ITDMGELHWILGIEVTRNRSLRTLHLSQRSYIHSIIRRYGFEDSKPVSMPMDPNVRLSTTQS---PQTTQQYAAMRN--IPYREAIGSLMYAALGTRPDIAYAVQAVSRFSTNPGTTHWEAVKRIFRYLKGTKDLWLSYGSRRDDGTLVGFTDADGSM-AEDRHAITGYAFIINGGAVSWSAKRQEIISLSTTESEYVAATHAAKEALWLRSLLDQI-FGTKLDAITLFSDNQSAIALSK 1497          
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 171 bits (432), Expect = 8.180e-47
Identity = 91/240 (37.92%), Postives = 138/240 (57.50%), Query Frame = 0
Query:    1 MKDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTLVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEE-FVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK 239
            +KDLG P ++ GIE++RDR NGTI+ SQ  YI  VL R+G    R V TL++  + IL   + D  ++P  +G        Y+ ++GSL+YA+ GTRPDI++AV +  +   +P  E ++  KR  RYL+   +L + F     G  +   + D  +A + +DRKS +GY + + G +  W S+KQ  V  SSTEAEY A   A ++ ++ R LL  +G     ST +FE N+S I L +
Sbjct:  193 VKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTLLDPNV-ILKKRTDDLIADPAMVGG-------YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISGYTYLIGGASFAWSSKKQSTVALSSTEAEYTALTHATRQAIWNRNLLSELGCPQEDSTLIFEDNQSTIALAR 424          
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Match: A0A177VUP4_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VUP4_9BASI)

HSP 1 Score: 169 bits (429), Expect = 1.040e-46
Identity = 96/238 (40.34%), Postives = 131/238 (55.04%), Query Frame = 0
Query:    3 DLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTLVEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGH-GLEEFVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAAGEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK 239
            DLG      GI + R+  +GTIT  Q  Y  EVL R+G  EC    T ++ K  +             + G  R +  +++ IVG L Y + GTRPD+AYAV    R   DP         R  RYL       +TFGG+ +G+  LE FVD+DWA D +DR+ST+G+VF + GGA+ W SRKQ  V  S+ EAEYVAAG AG+E++ L  +L + G    G+ T+   N++AI L K
Sbjct:  135 DLGPAHHCLGIRISRNWEDGTITLDQERYAKEVLARFGMSECNAAKTPMDQKANL----------RKATDGEARADKKKFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRVAANRVLRYLKRTSGAKLTFGGQKDGNISLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGRESLMLSGVLKAAGQDM-GTVTVHCDNQAAIQLVK 361          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig762.15614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GB69_PHYRM9.800e-5240.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9D5L2_PARCT3.490e-5138.08Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A146H7K8_MYCCL1.080e-5040.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB17_PHYRM2.320e-4939.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7M7_PHYRM5.550e-4941.00CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A4Y9ZVS1_9AGAM2.640e-4739.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H6XNZ2_9AGAR4.310e-4740.00Uncharacterized protein n=1 Tax=Mycena sanguinolen... [more]
A0A409WUQ4_9AGAR8.090e-4740.42Uncharacterized protein n=1 Tax=Panaeolus cyanesce... [more]
A0A284R853_ARMOS8.180e-4737.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VUP4_9BASI1.040e-4640.34Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 231..239
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 76..237
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 76..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig762contigH-paniculata_contig762:27625..28389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig762.15614.1mRNA_H-paniculata_contig762.15614.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig762 27487..28581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig762.15614.1 ID=prot_H-paniculata_contig762.15614.1|Name=mRNA_H-paniculata_contig762.15614.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp
MKDLGSPSRVSGIEVRRDRPNGTITTSQGSYIHEVLKRYGFDECRGVPTL
VEGKMKILAPESADKPSEPKSLGAVRDNSTEYRGIVGSLMYASTGTRPDI
AYAVHQAARRMEDPCREDFSTCKRFFRYLSTVPDLGITFGGKSNGHGLEE
FVDTDWAEDVEDRKSTTGYVFKLNGGAIRWCSRKQQLVTWSSTEAEYVAA
GEAGKETMYLRELLGSIGFGCRGSTTLFEGNKSAINLRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like