prot_H-paniculata_contig7588.15577.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7588.15577.1
Unique Nameprot_H-paniculata_contig7588.15577.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length953
Homology
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BLAST of mRNA_H-paniculata_contig7588.15577.1 vs. uniprot
Match: D8LIF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF5_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 7.520e-10
Identity = 68/176 (38.64%), Postives = 90/176 (51.14%), Query Frame = 0 
Query:   67 LSSIGSGXXXXXXTRVAVGSREPVPGRTPSIA-EASGPRAGGASVGGRSYTKRCDNQGAARQELGELEAEKEALLDYVQELLERVGCLETTSAGLERERSELSKRLEHLKGSDQAAEEMRHAIGRKDRDVADVRKQLKELHCRGEAERSEKEEMGRLYKELLEQLRASAEEKEHLQ 241
            ++S  SG           G   P  G  P++A E  G RA  A+V         + +G A +   ELEAEKEALLDYVQ+LL R+  LE   A LERER + S  LE            R  + +K++ +A    Q+++L          KEEMGRLY ELL+QL+ + EEKE LQ
Sbjct:  360 IASSSSGGHAIVAAAALGGRHTPAAGSKPALACELGGTRA--ANV---------EEEGGADRGGNELEAEKEALLDYVQDLLGRIKGLEAACASLERERGDSSINLEKT----------RKDLQQKEKAIA----QIEDLQKTXXXXXXXKEEMGRLYNELLKQLKTAEEEKEKLQ 510
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7588.15577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIF5_ECTSI7.520e-1038.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 258..278
NoneNo IPR availableCOILSCoilCoilcoord: 129..177
NoneNo IPR availableCOILSCoilCoilcoord: 216..243
NoneNo IPR availableCOILSCoilCoilcoord: 46..66
NoneNo IPR availableCOILSCoilCoilcoord: 421..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7588contigH-paniculata_contig7588:1837..10037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7588.15577.1mRNA_H-paniculata_contig7588.15577.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7588 552..10621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7588.15577.1 ID=prot_H-paniculata_contig7588.15577.1|Name=mRNA_H-paniculata_contig7588.15577.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=953bp
MRGAVEVQGGDCHWGLGPLTEQNLPQQGNVVRPRVIYRIKHRDNEAKMAT
ERARNFQRESSDLRRKLSSIGSGGGGGGGTRVAVGSREPVPGRTPSIAEA
SGPRAGGASVGGRSYTKRCDNQGAARQELGELEAEKEALLDYVQELLERV
GCLETTSAGLERERSELSKRLEHLKGSDQAAEEMRHAIGRKDRDVADVRK
QLKELHCRGEAERSEKEEMGRLYKELLEQLRASAEEKEHLQSKARGATTQ
RETDVKASEALREQLNRCLRRLSDVEKEAADKLRHSEGETMALKNALAGA
DTKLSLVENLEADAMVRGKELKECRKEMLLREEEIKKERSHTQHLVGVLG
ELETESARVKKQELGAVSRGKELERELCAMESKVGEIESLCEELQKRVVS
LSSGRETDELRRRLTAASELAERQDQLLEEASTRLETLQSESRRLQEELY
RAEEHSRNAKNVLEPVLLAARSHLLMASPTVESHASRDPTPVCMTSGHTS
QLWRSDPGNDENDDGLLKEACNCGNGRLLKDSVGIWGDDKKCSWTAHGDR
GHVWEEGAVEDIREVTSVASLAQAAAAALSTLLSQGTDGRRRGGQKLSKS
AAMNTTERPVVRPASHLEDDTASRALHTSDLTEPLEKITKAKSPRPPLDV
SAVEVAPGSDRRGVPSNSAASAPAVRSQHLAAGDEIELGVSWDEDRKQCR
PPGQGGRAEHGSRVIRDRYDRWPERDTRPNSGGGGDSSNISSSNNSNSIS
SSSNGTPDGIARLCSTTPDRMGDTGGATTVAATFKSPRLSKSRVSFEKGL
RQSTSRPIRDELERKGKYREPGPRDLTSIFSFVKGAGIKTDPESMRRMDS
ILRGQRLGAEKRDKSWRGGDCTVNTGAIRGRDFELEEIRRRSCLQPGSSR
SPATETWQTVSNTTITENSSPRPLGSPSPSAVKINERIRGAQAVLKTLRS
AG*
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