prot_H-paniculata_contig75877.15576.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig75877.15576.1
Unique Nameprot_H-paniculata_contig75877.15576.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length123
Homology
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: F2UPM9_SALR5 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UPM9_SALR5)

HSP 1 Score: 60.5 bits (145), Expect = 3.750e-8
Identity = 44/123 (35.77%), Postives = 64/123 (52.03%), Query Frame = 0
Query:    1 EFWVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVR-TKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVN--RGLTVCLKEEGAAIALPNGS-DLLCRKIGKHDFLVAT 119
            + W+ADSGATAH+TS   L+  Y   +   VTVA+ +T+ + G G  ++R T   G     +L  V HVP +  NL +L +V    RG +V +  + + I     S  LL  K   H FL A+
Sbjct:  410 QLWLADSGATAHITSDASLLTNYVAVTQ-HVTVANSQTVTVIGKGDAVLRVTGTDGAPGTITLKNVLHVPDIKYNLLALNLVTRARRGASVVIAADDSRIQFATWSVPLLPSKDTGHLFLYAS 531          
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: F2UNK2_SALR5 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UNK2_SALR5)

HSP 1 Score: 58.9 bits (141), Expect = 1.240e-7
Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 0
Query:    1 EFWVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVR-TKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVN--RGLTVCLKEEGAAIALPNGS-DLLCRKIGKHDFLVAT 119
            + W+ADSGATAH+TS   L+  Y   +   VTVA+ +T+ + G G  ++R T   G     +L  V HVP +  N+ +L +V    RG +V +  + + I     S  LL  K   H FL A+
Sbjct:   81 QLWLADSGATAHITSDASLLTNYIAVTQ-HVTVANNQTVTVIGKGDAVLRVTGTDGAPGTITLKNVLHVPDIKYNILALNLVTRARRGASVVIAVDDSRIQFATWSVPLLPSKDTGHLFLYAS 202          
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: F2UPN0_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UPN0_SALR5)

HSP 1 Score: 58.2 bits (139), Expect = 1.430e-7
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 0
Query:    1 EFWVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVR-TKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVN--RGLTVCLKEEGAAIALPNGS-DLLCRKIGKHDFLVAT 119
            + W+ADSGATAH+TS   L+  Y   +   VTVA+ + + + G G  ++R T   G     +L  V HVP +  NL +L +V    RG +V +  + + I     S  LL  K   H FL A+
Sbjct:   92 QLWLADSGATAHITSDASLLTNYIAVTQ-HVTVANNQAVTVIGKGDAVLRVTGTDGAPGTITLKNVLHVPDIKYNLLALNLVTRARRGASVVIAADDSRIQFATWSVPLLPSKDTGHLFLYAS 213          
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: F2UTC5_SALR5 (Integrase catalytic domain-containing protein n=3 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UTC5_SALR5)

HSP 1 Score: 58.5 bits (140), Expect = 1.770e-7
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 0
Query:    1 EFWVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVR-TKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVN--RGLTVCLKEEGAAIALPNGS-DLLCRKIGKHDFLVAT 119
            + W+ADSGATAH+TS   L+  Y   +   VTVA+ + + + G G  ++R T   G     +L  V HVP +  NL +L +V    RG +V +  + + I     S  LL  K   H FL A+
Sbjct:  432 QLWLADSGATAHITSDASLLTNYVAVTQ-HVTVANSQAVTVIGKGDAVLRVTGTDGAPGTITLKNVLHVPDIKYNLLALNLVTRARRGASVVIAADDSRIQFATWSVPLLPSKDTGHLFLYAS 553          
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: A0A4Y2F840_ARAVE (Uncharacterized protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2F840_ARAVE)

HSP 1 Score: 55.8 bits (133), Expect = 2.100e-7
Identity = 37/113 (32.74%), Postives = 57/113 (50.44%), Query Frame = 0
Query:    1 EFWVADSGATAHMTSSNELMFEYETCSN-LFVTVADGETLPIEGYGKMLVRTKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVNRGLTVCLKEEGAAIALPNGSDLLCRKIGK 112
            + W+ADSGA+ HMT   E    YE+ S+   V + + ET+   G G + VR    G+     LS V  VP + +NLFS+   V++G    + + G  ++     D   R +GK
Sbjct:   10 DMWLADSGASVHMTPQKEYFLSYESFSSPKDVKIGNNETMFAFGLGTVKVRMLVSGKWENNHLSDVWFVPEVSRNLFSVSRAVDKGYDFKVDKNGCYLS----KDGRVRLVGK 118          
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: UPI0005F40DD4 (uncharacterized protein LOC105568084 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F40DD4)

HSP 1 Score: 57.8 bits (138), Expect = 2.810e-7
Identity = 35/109 (32.11%), Postives = 58/109 (53.21%), Query Frame = 0
Query:    3 WVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVRTKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVNRGLTVCL-------KEEGAAIALPNGSD 104
            W+ADSGA+AH+T   E   ++E+ S  F ++A+GE + I G G++ V     G+    +L +V  + G  KNLFS+      G+T  +       K++G  +A    +D
Sbjct:  252 WLADSGASAHVTGRREWFSQFESTSTKF-SLANGEQVSIHGRGEVEVECLVEGKWQSVTLKKVFFISGFKKNLFSIGAAGEFGVTCQINKNSMNFKKDGELVAKAKKAD 359          
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: UPI0018C20B16 (uncharacterized protein LOC105841774 n=1 Tax=Bombyx mori TaxID=7091 RepID=UPI0018C20B16)

HSP 1 Score: 57.8 bits (138), Expect = 3.250e-7
Identity = 34/117 (29.06%), Postives = 55/117 (47.01%), Query Frame = 0
Query:    3 WVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVRTKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVNRGLTVCLKEEGAAIALPNGSDLLCRKIGKHDFLVAT 119
            W  DSGA+ HMTS  + M+     S   +TVA+ E L + G G + ++       +K  +  V  VPGL  NL S+  +V  G  V   ++G  +    G  +   K+    +++ T
Sbjct:  251 WYIDSGASMHMTSRIDWMYNVTESSVKNITVANREPLAVNGVGCVNIQLSQE---NKIQVKNVLFVPGLATNLLSVGAIVKNGYKVTFNDKGCEVGNSKGEVICSAKLKNSLYVLET 364          
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: F2TY76_SALR5 (Integrase catalytic domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TY76_SALR5)

HSP 1 Score: 57.8 bits (138), Expect = 3.300e-7
Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 0
Query:    1 EFWVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVR-TKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVN--RGLTVCLKEEGAAIALPNGS-DLLCRKIGKHDFLVAT 119
            + W+ADSGATAH+TS   L+  Y   +   +TVA+ +T+ + G    ++R T   G     +L  V HVP +  NL +L +V    RG +V +  + + I     S  LL  K   H FL A+
Sbjct:  602 QLWLADSGATAHITSDASLLTNYVAVTQ-HITVANSQTVTVIGKSDAVLRVTGTDGAPGTITLKNVLHVPDIKYNLLALNLVTRARRGASVVIAADDSRIQFATWSVPLLPSKDTGHLFLYAS 723          
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: F2UP05_SALR5 (Integrase catalytic domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UP05_SALR5)

HSP 1 Score: 57.4 bits (137), Expect = 4.330e-7
Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 0
Query:    1 EFWVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVR-TKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVN--RGLTVCLKEEGAAIALPNGS-DLLCRKIGKHDFLVAT 119
            + W+ADSGATAH+TS   L+  Y   +   VTVA+ + + + G G  ++R T   G     +L  V HVP +  NL +L +V    RG ++ +  + + I     S  LL  K   H FL A+
Sbjct:   19 QLWLADSGATAHITSDASLLTNYIAVTQ-HVTVANNQAVTVIGKGDAVLRVTGTDGVPGTITLKNVLHVPDIKYNLLALNLVTRARRGASIVIAADDSRIQFATWSVPLLPSKDTGHLFLYAS 140          
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Match: F2TWR2_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWR2_SALR5)

HSP 1 Score: 57.0 bits (136), Expect = 4.770e-7
Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 0
Query:    1 EFWVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVR-TKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVN--RGLTVCLKEEGAAIALPNGS-DLLCRKIGKHDFLVAT 119
            + W+ADSGATAH+T+   L+  Y   +   VTVA+ + + + G G  ++R T   G     +L  V HVP +  NL +L +V    RG +V +  + + I     S  LL  K   H FL A+
Sbjct:   94 QLWLADSGATAHITNDASLLTNYIAVTQ-HVTVANSQAVTVIGKGDAVLRVTGTDGAPGTITLKNVLHVPDIKYNLLALNLVTRARRGASVVIAADDSRIQFATWSVPLLPSKDTGHLFLYAS 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig75877.15576.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F2UPM9_SALR53.750e-835.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
F2UNK2_SALR51.240e-734.96Reverse transcriptase Ty1/copia-type domain-contai... [more]
F2UPN0_SALR51.430e-734.96Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
F2UTC5_SALR51.770e-734.96Integrase catalytic domain-containing protein n=3 ... [more]
A0A4Y2F840_ARAVE2.100e-732.74Uncharacterized protein n=1 Tax=Araneus ventricosu... [more]
UPI0005F40DD42.810e-732.11uncharacterized protein LOC105568084 n=1 Tax=Volle... [more]
UPI0018C20B163.250e-729.06uncharacterized protein LOC105841774 n=1 Tax=Bomby... [more]
F2TY76_SALR53.300e-734.15Integrase catalytic domain-containing protein n=1 ... [more]
F2UP05_SALR54.330e-734.15Integrase catalytic domain-containing protein n=1 ... [more]
F2TWR2_SALR54.770e-734.15Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig75877contigH-paniculata_contig75877:174..542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig75877.15576.1mRNA_H-paniculata_contig75877.15576.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig75877 174..542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig75877.15576.1 ID=prot_H-paniculata_contig75877.15576.1|Name=mRNA_H-paniculata_contig75877.15576.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
EFWVADSGATAHMTSSNELMFEYETCSNLFVTVADGETLPIEGYGKMLVR
TKDRGEIHKFSLSRVAHVPGLDKNLFSLQIVVNRGLTVCLKEEGAAIALP
NGSDLLCRKIGKHDFLVATRFPP
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