prot_H-paniculata_contig7533.15517.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7533.15517.1
Unique Nameprot_H-paniculata_contig7533.15517.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: D7G7B6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B6_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.050e-27
Identity = 94/110 (85.45%), Postives = 99/110 (90.00%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGAEEGG-DY 109
            MLLVLGGN +PTK DVTTALAAVG++ DEARLD LIA+MAGKDI ALIE+GKGKLAS GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF    EGG DY
Sbjct:    1 MLLVLGGNASPTKEDVTTALAAVGIECDEARLDQLIADMAGKDIAALIEAGKGKLASFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFXXXXEGGGDY 110          
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: A0A835ZFT3_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT3_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.500e-22
Identity = 86/110 (78.18%), Postives = 98/110 (89.09%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IDMGGGMDMFGGAEEGGDY 109
            M+LVLGGN +P+  DVT AL++VG++ADEARL  LIAEM GKD+N ++E+GK KLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +DMGGGMDMFGG E GGDY
Sbjct:    8 MMLVLGGNASPSAEDVTKALSSVGIEADEARLSQLIAEMEGKDLNEVMEAGKKKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGE-GGDY 116          
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: A0A7R9ZND5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZND5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.380e-18
Identity = 75/110 (68.18%), Postives = 91/110 (82.73%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IDMGGGMDMFGGAEEGGDY 109
            +L VLGG   PTK D++ A++ VG++AD+A +D L+  + GKD+N L+ESGKG LA +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +D+GGGMDMFGG E GGDY
Sbjct:    8 LLCVLGGKENPTKDDISKAMSTVGLEADDASVDALLTALEGKDLNELLESGKGLLAKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMDLGGGMDMFGGDEGGGDY 117          
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: A0A7S0C3X8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3X8_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 6.040e-18
Identity = 76/109 (69.72%), Postives = 89/109 (81.65%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGAEEGGDY 109
            +LLVLGGN +P+  DV  AL  VGV+ ++ RL+ LI+E+ GKD++ LI +G GKLA LG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFGG    GDY
Sbjct:    8 LLLVLGGNASPSADDVKKALGVVGVEVEDERLNALISELEGKDLSELIATGTGKLAQLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDMGGGMDMFGGEAATGDY 116          
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: A0A7S2RFX2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFX2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.720e-17
Identity = 78/111 (70.27%), Postives = 91/111 (81.98%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGAE--EGGDY 109
            +LLVLGGN +P+  DVT +LA+VGV+ D+  LD LI+E+ GKD+N ++ESGK  LA  GXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   DMGGGMDMFGG E  +GGDY
Sbjct:    8 LLLVLGGNASPSADDVTKSLASVGVEVDKESLDKLISELDGKDVNEIMESGKDMLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ADMGGGMDMFGGDEAGDGGDY 116          
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: A0A7S1BJ38_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJ38_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.310e-17
Identity = 79/109 (72.48%), Postives = 90/109 (82.57%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGAEEGGDY 109
            +L VLGGN +P+  DVTTAL+AVGV+AD  RL  L+ ++ GKD+N L+ SGKG LA  GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DMGGGMDMFGG +E GDY
Sbjct:    8 LLCVLGGNESPSVSDVTTALSAVGVEADSERLATLVKDLEGKDLNELLTSGKGLLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ADMGGGMDMFGG-DEAGDY 114          
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: A0A7S3Q302_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q302_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.660e-13
Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGAEEGGDY 109
            +LLVLGGN +P+  DVTTALAAVGV+AD A LD  +AEM GKDI+  + +GK  LA  GXXXXXXXXXXXXXXXXXXXXXXXXXXXX          DMFGG  +GGDY
Sbjct:    8 LLLVLGGNESPSAADVTTALAAVGVEADSASLDKFLAEMEGKDIDETLAAGKELLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXAPAATDMFGGDGDGGDY 113          
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: A0A1V9ZUV4_9STRA (Ribosomal protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUV4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.760e-13
Identity = 66/105 (62.86%), Postives = 79/105 (75.24%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGAEE 105
            +L VLGGN TP+  DV+  + AVG +ADE RL LLI E+ GKDI  +I  G+ KL+++      XXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGG  +
Sbjct:    8 LLCVLGGNATPSVADVSAVITAVGGEADEERLALLIKELEGKDIAEVIAEGQKKLSTVSIGAASXXXXXXXXXXXXXXXXXXXXXXXXXXADLGGGMDMFGGGSD 112          
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: A0A7S2LS78_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LS78_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 7.530e-13
Identity = 73/109 (66.97%), Postives = 88/109 (80.73%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGAEEGGDY 109
            ++LVLGGN TP+  DV TAL+AVGV++D   L  LI+E+ GKD+  ++E+GK +LA  GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +D+GGGMDMFG   E  DY
Sbjct:    8 LMLVLGGNATPSADDVKTALSAVGVESDADDLGKLISELEGKDLAEILETGKERLAKFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MDLGGGMDMFGDGGE--DY 113          
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Match: A0A2D4BM79_PYTIN (Ribosomal protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM79_PYTIN)

HSP 1 Score: 67.8 bits (164), Expect = 1.140e-12
Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = 0
Query:    1 MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIESGKGKLASLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGAEE 105
            +L +LGGN  P+  DVT  L++VGV+ D  RL+ +I+E+ GKD+N +I +G  KLA  G                                D+GGGMDMFGG  +
Sbjct:   10 LLAILGGNAAPSAADVTAILSSVGVEVDAERLNQVISELEGKDVNEIIAAGSKKLAKFGEEEE---------------------------ADLGGGMDMFGGGSD 87          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7533.15517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7B6_ECTSI2.050e-2785.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZFT3_9STRA3.500e-2278.1860s acidic ribosomal protein-domain-containing pro... [more]
A0A7R9ZND5_9STRA4.380e-1868.18Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S0C3X8_9STRA6.040e-1869.72Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2RFX2_9STRA1.720e-1770.27Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1BJ38_9STRA2.310e-1772.48Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3Q302_9STRA2.660e-1366.97Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1V9ZUV4_9STRA3.760e-1362.86Ribosomal protein n=1 Tax=Achlya hypogyna TaxID=12... [more]
A0A7S2LS78_9STRA7.530e-1366.97Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A2D4BM79_PYTIN1.140e-1236.19Ribosomal protein putative n=1 Tax=Pythium insidio... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 11..97
e-value: 1.9E-17
score: 63.6
NoneNo IPR availablePANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 1..100
NoneNo IPR availablePANTHERPTHR21141:SF560S ACIDIC RIBOSOMAL PROTEIN P2coord: 1..100
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..53
e-value: 3.2E-14
score: 54.8
IPR027534Ribosomal protein L12 familyHAMAPMF_01478Ribosomal_L12_archcoord: 1..101
score: 12.161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7533contigH-paniculata_contig7533:1579..2592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7533.15517.1mRNA_H-paniculata_contig7533.15517.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7533 803..2592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7533.15517.1 ID=prot_H-paniculata_contig7533.15517.1|Name=mRNA_H-paniculata_contig7533.15517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MLLVLGGNPTPTKGDVTTALAAVGVDADEARLDLLIAEMAGKDINALIES
GKGKLASLGGGGGGGGGGGGGGDDAPAVEEKKVEEEEEEEIDMGGGMDMF
GGAEEGGDY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038716P1/P2_N_sf
IPR027534Ribosomal_L12