prot_H-paniculata_contig753.15513.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig753.15513.1
Unique Nameprot_H-paniculata_contig753.15513.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length616
Homology
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BLAST of mRNA_H-paniculata_contig753.15513.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 6.810e-6
Identity = 25/35 (71.43%), Postives = 27/35 (77.14%), Query Frame = 0 
Query:    6 SKRCGHEGCSKSPSYGLEGSSKAEFCAQHAHDDMV 40
            SKRCGH GC+K PSYG +GS KAE CAQHA   MV
Sbjct:    6 SKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig753.15513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI6.810e-671.43EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig753contigH-paniculata_contig753:30757..32604 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig753.15513.1mRNA_H-paniculata_contig753.15513.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig753 23518..32740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig753.15513.1 ID=prot_H-paniculata_contig753.15513.1|Name=mRNA_H-paniculata_contig753.15513.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=616bp
MPYRRSKRCGHEGCSKSPSYGLEGSSKAEFCAQHAHDDMVYVKIKRCFHE
GCLTQPFYGLKGSKKAEFCAQHAHDGMVDVKSRRCSHEGCSTQPSYGLEG
SKKAEFCAQHAEDGMVEVMTKRCSQEGCSKRPSYGLEGSRKAEFCAQHAH
DGMVDVKSKRCSHEGCSTQPSYGLEGSRKAEFCAQHAKHDMVDVKSKRCS
QEGCNMRPSHGLPGSGKVEFCAQHAEHDMVDGKYKRCSHEGCSTSPSYGL
KGSRKAEFCAYHAEDGMVNLRSKKCSHEGCSTQPSYGLEGSGKAEFCAHH
AEDGMVDLRSKKCSHESCSTQPSYGLEGSRRAKFCSQHAEDGMVNVMAKR
CSYEGCYKTPSYGLEGSRKAELCAQHAEDGMVNVTSKRCSHEGCSKRPSY
GLEGSRKAKFCVQHAHGGMVDVTSKRCSHEGCSTQPSYELEGSRGAEFCA
QHAKHDMVDVKSKRCSQEDCSKRPSYGLPGSSKAEFCMQHAEGNMVSVSH
EKTARRGRRSEKATSRSAVKLEVFPQDSEDQAIESTVPGKGRKRKSRAVL
PSTSANPIDPDDRKSVRACTTGSLRPSEFVALRASEAGLPSLEGGTSVKA
ELMFLCGVRCPDLGW*
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