prot_H-paniculata_contig7479.15461.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7479.15461.1
Unique Nameprot_H-paniculata_contig7479.15461.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length721
Homology
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: D7FNP3_ECTSI (Poly(A) binding protein, cytoplasmic 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP3_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 1.810e-122
Identity = 229/378 (60.58%), Postives = 256/378 (67.72%), Query Frame = 0
Query:   68 YTQPKQVMSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPG-ITTQMLIGEFARFGPLDKELTAIKPGAKCGFVKYRYRLHAETAKKDLNNRPAFGGQCPSLHIEWNSVESGPDGSEAVGSTDGNASEKRAGSDMENTSTRS---------------------SGSLRPGREGSVANSVHVQFEGEQAAVSGVNEMMIKKTFTQWEPILNVVIPSSRFNGVSPGPRQLPRCWGFVHFPPTPEGEEAAKDAIEALTGTTIAGMKVHCTMSRSSSGQGQGGNSGAGG-WRKNVGISGGSNRSRRGSLDRGADDHSRQMMPHGGGQGFGGRPGRSSLDGAGR-----GGWG 417
            + Q  +VMSVSIKRDRATGKNLGYGFVK+SSHQEAR AKEAMQ VELGGRRVRVGWAQKNTSLYVGGLE G ITT+ML+ EFARFGPLDKELT IKPGAK GFVKYRYRLHAE AKK+LN RPAF G CPSL IEWNSVES    SE  GS    A                                     + S  P  E S +++VHVQFEG+Q  VS VNE+MI+K FT+WEP++++VIP+SRFNGVSPGPRQLPRCW FVHFPPTP+GE AA DAI+ L GTTI+ ++VHCTMSR       GG++ AG  WRK        NR+RR S      D  R M      QGFGGRP RSSLD  G      GGWG
Sbjct:  225 FEQHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAXXXXXXXXXXXXXXXXKEXXXXXXXXXXXXXXXXXXXAHSRHPRGEVS-SHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAADAIKGLNGTTISELRVHCTMSR-------GGSTRAGSPWRKQGXXXXXXNRARRHSTXXXXXD--RAMGHAXXXQGFGGRPSRSSLDHPGAQQGRSGGWG 592          
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: A0A6H5L4J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J2_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 4.060e-114
Identity = 196/300 (65.33%), Postives = 222/300 (74.00%), Query Frame = 0
Query:   68 YTQPKQVMSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPG-ITTQMLIGEFARFGPLDKELTAIKPGAKCGFVKYRYRLHAETAKKDLNNRPAFGGQCPSLHIEWNSVESGPDGSEAVGSTDGNASEKRAGSDMENTSTRSSG---------------------SLRPGREGSVANSVHVQFEGEQAAVSGVNEMMIKKTFTQWEPILNVVIPSSRFNGVSPGPRQLPRCWGFVHFPPTPEGEEAAKDAIEALTGTTIAGMKVHCTMSR 345
            + Q  +VMSVSIKRDRATGKNLGYGFVK+SSHQEAR AKEAMQ VELGGRRVRVGWAQKNTSLYVGGLE G ITT+ML+ EFARFGPLDKELT IKPGAK GFVKYRYRLHAE AKK+LN RPAF G CPSL IEWNSVES    SE  GS    A ++                                    S  P  E S +++VHVQFEG+Q  VS VNE+MI+K FT+WEP++++VIP+SRFNGVSPGPRQLPRCW FVHFPPTP+GE AA +AI+ L GTTI+ ++VHCTMSR
Sbjct:   88 FEQHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAEDRTXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXAHSRHPRGEVS-SHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSR 386          
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: A0A836CDW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDW8_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.230e-32
Identity = 112/336 (33.33%), Postives = 156/336 (46.43%), Query Frame = 0
Query:   71 PKQVMSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPGITTQMLIGEFARFGPLDKELTAIKP-GAKCGFVKYRYRLHAETAKKDLNNRPAFGGQCPSLHIEWNSVESGPDGSEAVGSTDGNASEKRAGSDMENTSTRSSGSLRPGREGSVANSVHVQFEGEQAAVSGVNEMMIKKTFTQWEPILNVVIPSSRF----------------------------------------------------NGVSPGPRQL------PRCWGFVHFPPTPEGEEAAKDAIEALTGT-TIAGMKVHCTMSRS 346
            P++V++V+IKRDR+T KNLGYGFV+M SH EA  AKE M   E+ GRR+RVGWAQKN +L V GL  G+T + +   F  FG L++E T +   G+    VKYR RLHAE A++ LN   A G   P L ++W++   G     AVG     A+  R G        R + +  P R       V V  EGE A+     E  + + F  + P+++V  P +                                                       G+   PR L       R +  V FPPT  G+  A  A+ A++GT T +G+KV C++ RS
Sbjct:   38 PRRVLTVNIKRDRSTSKNLGYGFVRMGSHAEACVAKERMHRAEVHGRRIRVGWAQKNAALAVSGLPDGVTAEQVKALFRPFGALEEENTQLMTDGSGTAVVKYRNRLHAEDARRQLNGSQALG-PAP-LRVDWSAPAGG-----AVGGAQSKAAPHRGG--------REATAPAPCR-------VQVMLEGEAASDLQEVEETVLRLFQDFAPLVSVSTPRAEAARAPSAAKAGQDAXXXXXXXXXXXXXXXXXTAPKEAAPATGMSAADALVADTQGLQLRPRPLHKPARPQRAYCAVTFPPTRAGQARAMAAMAAISGTVTPSGLKVTCSLIRS 351          
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: L8H825_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H825_ACACA)

HSP 1 Score: 139 bits (351), Expect = 4.590e-32
Identity = 90/275 (32.73%), Postives = 145/275 (52.73%), Query Frame = 0
Query:   71 PKQVMSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPGITTQMLIGEFARFGPLDKELTAIKPGAKCGFVKYRYRLHAETAKKDLNNRPAFGGQCPSLHIEWNSVESGPDGSEAVGSTDGNASEKRAGSDMENTSTRSSGSLRPGREGSVANSVHVQFEGEQAAVSGVNEMMIKKTFTQWEPILNVVIPSSRFNGVSPGPRQLPRCWGFVHFPPTPEGEEAAKDAIEALTGTTIAGMKVHCTMSR 345
            P  V+SV IKRDR T  +LGYGFV + S ++A  AK+AM    +GGR +R+GWAQKNT+L++G L+P IT+  L   F +FGP+ +E T +K     GFV++R+R HAE AK+++NN+   G +   + I W                 G+A+ +R                         + VH+QFE  ++     +E++ K  F ++  +++V +P ++         QL R +GF+++  T  GE +A  AI  L  + I G+++ C   +
Sbjct:   85 PFGVISVEIKRDRVTNYSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTNLFIGDLDPSITSAQLREVFRQFGPIYEEETFVK-NRNYGFVRFRHRKHAEMAKREMNNK-VLGARA--IRIGW-----------------GDANYQR-------------------------HCVHIQFEPAESEALTESEVIAK--FEEFGTVMSVNLPRNQ--------GQL-RGFGFIYYDDTDAGENSAARAITTLNNSPICGVRIQCNYGK 302          
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: A0A7S3DFR0_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFR0_9EUKA)

HSP 1 Score: 137 bits (345), Expect = 5.500e-31
Identity = 81/278 (29.14%), Postives = 143/278 (51.44%), Query Frame = 0
Query:   68 YTQPKQVMSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPGITTQMLIGEFARFGPLDKELTAIKPGAKCGFVKYRYRLHAETAKKDLNNRPAFGGQCPSLHIEWNSVESGPDGSEAVGSTDGNASEKRAGSDMENTSTRSSGSLRPGREGSVANSVHVQFEGEQAAVSGVNEMMIKKTFTQWEPILNVVIPSSRFNGVSPGPRQLPRCWGFVHFPPTPEGEEAAKDAIEALTGTTIAGMKVHCTMSR 345
            + Q  +V+++ IKRDR T  +LGYGFV+    ++A  AK+ +    +G R +R+GWAQKNT+L++G L+  +T+++L  EF +FGPL +E T +K G   GFV++R R  AETAK+++  +  F G+   + I W   +S                                          + N VH +F+  Q+  + ++E  ++  F ++  + +V +P +  +         P+ +GFV+F  +  G+ AA +AI  + G  IAG+++ C + +
Sbjct:   46 FLQFGEVINIDIKRDRMTSNSLGYGFVEFQRFEDALEAKKQLSGARIGERAIRLGWAQKNTNLFIGDLDASVTSEILFNEFKQFGPLFEEDTFVKEGMSYGFVRFRKREDAETAKREMQGKN-FHGRV--IRIGWGDAKS------------------------------------------IDNCVHFRFDTSQSKAA-ISEATVRDVFGKFGNVESVSLPRNSDD--------TPKGFGFVYFSNSSAGQAAANNAIAEVNGKVIAGVELTCKLGK 269          
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: A0A7S0DL40_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL40_9EUKA)

HSP 1 Score: 135 bits (339), Expect = 3.160e-30
Identity = 90/276 (32.61%), Postives = 139/276 (50.36%), Query Frame = 0
Query:   74 VMSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPGITTQMLIGEFARFGPLDKELTAIKPGAKCGFVKYRYRLHAETAKKDLNNRPAFGGQCPSLHIEWNSVESGPDGSEAVGSTDGNASEKRAGSDMENTSTRSSGSLRPGREGSVANSVHVQF----EGEQAAVSGVNEMMIKKTFTQWEPILNVVIPSSRFNGVSPGPRQLPRCWGFVHFPPTPEGEEAAKDAIEALTGTTIAGMKVHCTMSR 345
            V++V IKRDR T  NLGYGFV+  +H++A  AK+A+  VE+ GR++R GWAQ+NT+L+VG L+  I   +    F+R+G L  + T  K     G VK++ R +AETAK +LN +     + P + + W                 G+ S ++                         + VHV+F    E +    S ++E +++K F ++  +L V +P    N +        + +GFVHF  T +GEE+AK AI  L+GT I  + V C   R
Sbjct:  101 VVNVDIKRDRVTNNNLGYGFVQFETHEQALKAKKALHGVEVSGRKIRTGWAQRNTTLFVGDLDNTIDATVYRTAFSRYGNLVDDETYFKVDKGFGMVKFKTRENAETAKVELNGKRIGQSKRP-VRVIW-----------------GDTSVQK-------------------------HCVHVKFDVGKEVKSIQESEISEDVLQKVFQEYGQVLTVNLPRHSDNTL--------KGYGFVHFEDTEKGEESAKKAIANLSGTKIGRLVVQCNYGR 325          
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: A0A7S0TF52_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TF52_9EUKA)

HSP 1 Score: 125 bits (314), Expect = 4.130e-28
Identity = 93/282 (32.98%), Postives = 132/282 (46.81%), Query Frame = 0
Query:   75 MSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYV---GGLEPGITTQMLIGEFARFGPLDKELTAIKPGAKCGFVKYRYRLHAETAK-----KDLNNRPAFGGQCPSLHIEWNSVESGPDGSEAVGSTDGNASEKRAGSDMENTSTRSSGSLRPGREGSVANSVHVQFEGEQAAVSGVNEMMIKKTFTQWEPILNVVIP---SSRFNGVSPGPRQLPRCWGFVHFPPTPEGEEAAKDAIEALTGTTIAGMKVHCTMSR 345
            + V IKRD+ T  NLGYGFVK  +   A  AK  +  +E+ GR +R+GWAQKNT+L+V   G +E  IT + L   F+ FGP+ +E T +K   K GFVK+++RLHAE AK     K L  +  +    P + I W                 G+A+ +R                         N VHVQFE   A+   + E   K+ F ++  +  V +P     R  G           +GF+HF    EGEE+A  AI  LT + I G+ + C   +
Sbjct:   31 VEVDIKRDKVTKNNLGYGFVKFRNRCHAEQAKRKLNGLEIAGRAIRIGWAQKNTNLFVCLVGDVERHITGEHLREIFSEFGPIYEEDTFVKRN-KYGFVKFKHRLHAEKAKAALDGKHLLTKNGYKTMKP-VRIGW-----------------GDANTQR-------------------------NCVHVQFEQNSASSVDLKEEDFKQQFQRFGVVNKVSLPRYSDKRLKG-----------YGFIHFEENDEGEESAARAITELTASPIKGVVIMCNFGK 257          
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: A0A7S3Z8S4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8S4_9EUKA)

HSP 1 Score: 129 bits (324), Expect = 4.660e-28
Identity = 89/276 (32.25%), Postives = 140/276 (50.72%), Query Frame = 0
Query:   74 VMSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPGITTQMLIGEFARFGPLDKELTAIKPGAKCGFVKYRYRLHAETAKKDLNNRPAFGGQCPSLHIEWNSVESGPDGSEAVGSTDGNASEKRAGSDMENTSTRSSGSLRPGREGSVANSVHVQFE-GEQAAV---SGVNEMMIKKTFTQWEPILNVVIPSSRFNGVSPGPRQLPRCWGFVHFPPTPEGEEAAKDAIEALTGTTIAGMKVHCTMSR 345
            V++V IKRD+ T  NLGYGFV+  +H+EA  AK+A+  V + GR++R GWAQ+NT+L+VG L+  +        FAR+G L  + T  K     G VKY+ R +AETAK +LN +     + P + + W                 G+ S ++                         + VHV+F+ G++      S ++E  ++K F+++  + +V +P  R N       Q  + +GFVHF  + +GEE+AK AI  L+GT I  + + C   R
Sbjct:  134 VVNVDIKRDKVTHNNLGYGFVQFETHEEAVKAKKALHGVVVSGRKIRTGWAQRNTTLFVGDLDSFVDESEYRAAFARYGSLVLDETYFKVDKGFGMVKYKTRENAETAKMELNGKKIGKSKRP-VRVIW-----------------GDTSVQK-------------------------HCVHVKFDVGKEVKTIQDSDISEDDLQKVFSEYGQVQSVNLP--RHND------QSLKGYGFVHFEDSEKGEESAKKAIANLSGTKIGRLVIQCNYGR 358          
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: W7TSQ6_9STRA (Tia1 cytotoxic granule-associated rna binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSQ6_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.190e-26
Identity = 93/278 (33.45%), Postives = 145/278 (52.16%), Query Frame = 0
Query:   74 VMSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPGITTQMLIGEFARFGPLDKELTAIKPG--AKCGFVKYRYRLHAETAKKDLNNRPAFGGQCPSLHIEWNSVESGPDGSEAVG-STDGNASEKRAGSDMENTSTRSSGSLRPGREGSVANSVHVQFEGEQAAVSGVNEMMIKKTFTQWEPILNVVIPSSRFNGVSPGPRQLPRC---WGFVHFPPTPEGEEAAKDAIEALTGTTIAGMKVHCTMSR 345
            V  V IKRD+ T +NLGYGFV+MSSH++A  AKE MQ  ++ GRR+R+GWAQ+NT+L++G L+     + L   F  FG L    + ++ G   K G VK+  R  AETA+++++ R    G  P + + W+  ++    ++  G S    ++E+ +   +       +G L   R  SV    HV FE +    + V E +I   F  +  I+ V++P       S     +  C   +GFVHF  +  G   A +AI  L G  +AG+++ C  SR
Sbjct:  131 VEMVDIKRDKVTMRNLGYGFVQMSSHEQAAVAKERMQGADIQGRRIRIGWAQRNTTLFIGDLDESTNVEDLHRTFGPFGLLYTNDSYLRQGKCGKYGSVKFMSRKDAETARREMHGRVLRDGTRP-IRVVWHHPQTI---TKKTGLSVPLPSNEQHSRELVHIPPPPPAGVLVSSRPYSV----HVHFEAD-GMENLVTENLIYGLFAPFGQIIAVILPQGPGILCSDQNEDVSCCRRGYGFVHFTGSALGRLCAIEAIRTLQGEIVAGIRLQCAFSR 399          
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Match: A0A7S2RB19_9STRA (Hypothetical protein n=4 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB19_9STRA)

HSP 1 Score: 121 bits (304), Expect = 7.090e-25
Identity = 62/143 (43.36%), Postives = 87/143 (60.84%), Query Frame = 0
Query:   73 QVMSVSIKRDRATGKNLGYGFVKMSSHQEARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPGITTQMLIGEFARFGPLDKELTAIKPGAKCG-------------FVKYRYRLHAETAKKDLNNRPAFGGQCPSLHIEW 202
            +V+ V +KRDR T +NLGYGFV+M SH EA  AKE+M   E+ GRRVRVGWA KN++L V  L+PG++ + L+  FARFGPLD + + ++P   C                K+  R HAE+AK++L+         P L ++W
Sbjct:   78 RVVEVLVKRDRLTHRNLGYGFVRMGSHAEACLAKESMHGREVAGRRVRVGWAMKNSTLVVKDLDPGLSEEDLLNAFARFGPLDLDQSGVRPAEPCSEEEEAGGSTALQAVFKFTQRTHAESAKQNLSGMMLASSSAP-LRVDW 219          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7479.15461.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNP3_ECTSI1.810e-12260.58Poly(A) binding protein, cytoplasmic 4-like n=1 Ta... [more]
A0A6H5L4J2_9PHAE4.060e-11465.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CDW8_9STRA3.230e-3233.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L8H825_ACACA4.590e-3232.73RNA recognition motif domain containing protein n=... [more]
A0A7S3DFR0_9EUKA5.500e-3129.14Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S0DL40_9EUKA3.160e-3032.61Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S0TF52_9EUKA4.130e-2832.98Hypothetical protein (Fragment) n=1 Tax=Elphidium ... [more]
A0A7S3Z8S4_9EUKA4.660e-2832.25Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
W7TSQ6_9STRA3.190e-2633.45Tia1 cytotoxic granule-associated rna binding prot... [more]
A0A7S2RB19_9STRA7.090e-2543.36Hypothetical protein n=4 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 51..122
e-value: 8.5E-5
score: 31.9
coord: 129..199
e-value: 5.0E-4
score: 29.4
coord: 253..342
e-value: 0.38
score: 10.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 130..188
e-value: 1.7E-5
score: 24.5
coord: 74..120
e-value: 6.7E-8
score: 32.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 60..126
score: 10.752
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 265..390
e-value: 2.6E-9
score: 39.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 67..125
e-value: 2.7E-14
score: 55.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 126..204
e-value: 2.8E-9
score: 38.8
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 73..128
coord: 129..632
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..720
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..69
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 73..192
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 267..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7479contigH-paniculata_contig7479:4324..9884 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7479.15461.1mRNA_H-paniculata_contig7479.15461.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7479 2198..10545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7479.15461.1 ID=prot_H-paniculata_contig7479.15461.1|Name=mRNA_H-paniculata_contig7479.15461.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=721bp
MLVLDEMCMRVFFLQAKQNYLYAYTCHVFFFKSPAIHAYVCALVDIVSKH
KVMLGCNPLFFSVASIWYTQPKQVMSVSIKRDRATGKNLGYGFVKMSSHQ
EARTAKEAMQNVELGGRRVRVGWAQKNTSLYVGGLEPGITTQMLIGEFAR
FGPLDKELTAIKPGAKCGFVKYRYRLHAETAKKDLNNRPAFGGQCPSLHI
EWNSVESGPDGSEAVGSTDGNASEKRAGSDMENTSTRSSGSLRPGREGSV
ANSVHVQFEGEQAAVSGVNEMMIKKTFTQWEPILNVVIPSSRFNGVSPGP
RQLPRCWGFVHFPPTPEGEEAAKDAIEALTGTTIAGMKVHCTMSRSSSGQ
GQGGNSGAGGWRKNVGISGGSNRSRRGSLDRGADDHSRQMMPHGGGQGFG
GRPGRSSLDGAGRGGWGANPGMRPNVAIHQRHHPFPHFPPPHGQPHHMPH
HPTAGHGPHLMQQHAHQPHTQHPPQQHQQQLYGYGAAATAGYAGQYLLPT
ATPPAGAGGGGEVAGAAGAAGTAGDMMMQTPYGVSPYPYMFQGVPYAAAA
QQGYPIGYPQMYGFPYPSTGMGMDPSMLQGQVAAAGVQQQQAGGASTGQQ
PAQQPSPMHQNPTQGQAVVPSPQTATPLPQQQQQAQQHMAAQRQAPSQLQ
TQQQAARAVAQRQMGMQPMIMPGAGNPAGLNVGVPTYMPMYQLPQMPPGG
TGAQGVSEPSVDQEEAKHGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf