prot_H-paniculata_contig74523.15433.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig74523.15433.1
Unique Nameprot_H-paniculata_contig74523.15433.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length190
Homology
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: A0A1I9LVT4_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT4_9PHAE)

HSP 1 Score: 352 bits (902), Expect = 1.380e-121
Identity = 177/190 (93.16%), Postives = 185/190 (97.37%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQT EFLKRACDFSKRAS KKQTFLFVGTKKQ+ASLIAIEAQKCGAFYINHRWLGGMLTNW+TIKSRIDRLN LE QEK+N+F++LPKKEA+NLKKELEKLKKYFNGVKGMK +PDILVIIDQKREIIAIKEALSLNIPIISILDTN
Sbjct:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTMEFLKRACDFSKRASEKKQTFLFVGTKKQSASLIAIEAQKCGAFYINHRWLGGMLTNWITIKSRIDRLNHLEEQEKINSFNSLPKKEAANLKKELEKLKKYFNGVKGMKTLPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190          
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: D1GJH5_FUCVE (30S ribosomal protein S2, chloroplastic n=41 Tax=Phaeophyceae TaxID=2870 RepID=D1GJH5_FUCVE)

HSP 1 Score: 340 bits (873), Expect = 3.600e-117
Identity = 170/190 (89.47%), Postives = 181/190 (95.26%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            MAKIELAQLL+AGVHFGHKA RWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSK+ASAK QTFLFVGTKK+A+SLIA EAQKCGAFYINHRWLGG LTNW+TIK RI RLN+LE QEKL +F NLPKKEASNLKKELEKLKKYFNG+KGMKK+PDILVIIDQKREIIAI+EALSLNIPIISI+DTN
Sbjct:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASAKNQTFLFVGTKKRASSLIASEAQKCGAFYINHRWLGGTLTNWITIKGRIQRLNNLEEQEKLTSFKNLPKKEASNLKKELEKLKKYFNGIKGMKKIPDILVIIDQKREIIAIQEALSLNIPIISIIDTN 190          
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: A0A8F0JWX3_9PHAE (Ribosomal protein S2 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JWX3_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 9.200e-115
Identity = 167/190 (87.89%), Postives = 177/190 (93.16%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            MAKIELAQLLDAGVH GHKAHRWNPKMFPYIY ERNG+HILDLIQTTEFLKRACDFSK+A+ K QTFLFVGTKKQAASLIA EAQ+CGAFY+NHRWLGGMLTNWVTIK+RI RL DLE QEK N F NLPKKE SNLKKELEKLKKYFNGVKGM+K+PDI+VIIDQKREIIAI+EALSL IPIISILDTN
Sbjct:    1 MAKIELAQLLDAGVHLGHKAHRWNPKMFPYIYTERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAASLIANEAQRCGAFYVNHRWLGGMLTNWVTIKNRIHRLKDLEEQEKNNFFKNLPKKEVSNLKKELEKLKKYFNGVKGMEKIPDIIVIIDQKREIIAIQEALSLEIPIISILDTN 190          
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: A0A8F0K065_9PHAE (Ribosomal protein S2 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K065_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 1.500e-114
Identity = 170/190 (89.47%), Postives = 179/190 (94.21%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            MAKIELAQLLDAGVHFGHKA+RWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSK+A+ K QTFLFVGTKKQ ASLIA EA  CGAFYINHRWLGGMLTNWVTIKSRIDRLN LE QEKLN F NLPKKEAS+LKKELEKLKKYFNGVK MK++PDI+VIIDQKREIIAI+EALSL+IPIISILDTN
Sbjct:    1 MAKIELAQLLDAGVHFGHKANRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKAARKNQTFLFVGTKKQTASLIANEATNCGAFYINHRWLGGMLTNWVTIKSRIDRLNYLEDQEKLNLFVNLPKKEASDLKKELEKLKKYFNGVKAMKQIPDIIVIIDQKREIIAIQEALSLDIPIISILDTN 190          
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: A0A141BSD4_9PHAE (30S ribosomal protein S2, chloroplastic n=12 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD4_9PHAE)

HSP 1 Score: 333 bits (855), Expect = 1.990e-114
Identity = 166/190 (87.37%), Postives = 179/190 (94.21%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            MAKIELAQLL+AGVHFGHKA RWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSK+AS+K QTFLFVGTK+  ASL+A EAQKCGAFYINHRWLGG LTNWVTIK RI+RLN+LE QEKL +F NLPKKEAS LKKELEKLKKYFNGVKGMKK+PDIL+IIDQKREIIAI+EA+SLNIPIISI+DTN
Sbjct:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASSKNQTFLFVGTKRHTASLVASEAQKCGAFYINHRWLGGTLTNWVTIKERIERLNNLEEQEKLTSFKNLPKKEASYLKKELEKLKKYFNGVKGMKKLPDILIIIDQKREIIAIQEAISLNIPIISIIDTN 190          
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: A0A7S6U9Z1_9STRA (30S ribosomal protein S2, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Z1_9STRA)

HSP 1 Score: 289 bits (740), Expect = 6.640e-97
Identity = 141/190 (74.21%), Postives = 167/190 (87.89%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            MAKI+LAQLL AGVHFGHKA+RWNPKMFPYIY ERNG+HILDLIQT E LKRACDF + A+ + +TFLFVGTKKQA+S+IA EA +CGA Y+NHRWLGGMLTNWVT+KSRI+RL +LE Q+  N+F NLPKKE + L+KELE+L+KYFNGVK M++ PDI+ IIDQKREI A+KEA SLNIPII++LDTN
Sbjct:    1 MAKIKLAQLLKAGVHFGHKAYRWNPKMFPYIYTERNGVHILDLIQTAELLKRACDFCEIAAKQNKTFLFVGTKKQASSIIASEATRCGANYVNHRWLGGMLTNWVTLKSRIERLKNLEKQDSENSFENLPKKEVAKLRKELERLRKYFNGVKQMQQRPDIIFIIDQKREITAVKEARSLNIPIITLLDTN 190          
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: A0A8E5XRD1_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRD1_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 8.660e-95
Identity = 137/190 (72.11%), Postives = 166/190 (87.37%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            MAKIELAQLL+AGVHFGHKA RWNPKMFP+IYAERNGIHILDLIQT + LK ACDFS + +   +TFLF+GTK+QAA++IA  +Q+CGAFY+NHRWLGGMLTNW TIK RI+RL +LE QEK++ F+  PKKEA+ LK EL KL+K+FNGVK M+++PD+++IIDQKREI A+KEA SLNIPII+ILDTN
Sbjct:    1 MAKIELAQLLEAGVHFGHKAKRWNPKMFPHIYAERNGIHILDLIQTAQLLKVACDFSTKIAKNNKTFLFIGTKRQAAAVIAHASQRCGAFYVNHRWLGGMLTNWTTIKRRIERLKELEVQEKIDDFAAFPKKEAAGLKNELRKLQKHFNGVKEMEELPDVVIIIDQKREITAVKEAQSLNIPIITILDTN 190          
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: A0A2I4Q2U3_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2U3_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 1.660e-92
Identity = 135/190 (71.05%), Postives = 160/190 (84.21%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            M KIELA LLDAGVH GHKA+RWNPKMFPYIY ERN +HI+DLIQT +FL+ AC FS+ A+   +TFLF+GT K  A LI  E+++CGAFYINHRWLGGMLTNW TIK+RI+RL  LE QE+L  F N+PKKEA+ LKKELEKLKKYF+GVK MKK+PD ++IIDQ+ +IIA+KEALSLNI +ISILDTN
Sbjct:    1 MKKIELAHLLDAGVHLGHKANRWNPKMFPYIYTERNQVHIIDLIQTIKFLRLACTFSENAARNNETFLFIGTNKYTAPLITAESERCGAFYINHRWLGGMLTNWGTIKNRIERLKYLEEQERLTTFKNIPKKEAAKLKKELEKLKKYFSGVKEMKKLPDNIIIIDQRNDIIAVKEALSLNIQVISILDTN 190          
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: B7T1S3_VAULI (30S ribosomal protein S2, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1S3_VAULI)

HSP 1 Score: 264 bits (674), Expect = 8.300e-87
Identity = 130/190 (68.42%), Postives = 158/190 (83.16%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            M K+EL++LL AGVHFGHKAH WNPKM PYIY E++G+HI+DLIQT+  LK+AC+F + AS   ++FLFVGTK+QAA +IA EAQ+CGA Y+N+RWLGGMLTNW+T ++RI RL DLE Q++     NLPKKEA+ L KELE+L+KYF GVK M K PDI+VIIDQK EIIAIKEAL+LN PIISILDTN
Sbjct:    1 MVKVELSELLAAGVHFGHKAHHWNPKMSPYIYTEKDGVHIIDLIQTSVLLKQACNFVQTASQTGKSFLFVGTKRQAAPVIAKEAQRCGAHYVNYRWLGGMLTNWITFRTRIQRLKDLENQQQQGEIDNLPKKEAAKLTKELERLRKYFTGVKTMTKEPDIIVIIDQKIEIIAIKEALALNKPIISILDTN 190          
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Match: A0A8A6KM53_9STRA (30S ribosomal protein S2, chloroplastic n=2 Tax=Coscinodiscus TaxID=33641 RepID=A0A8A6KM53_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.160e-85
Identity = 129/190 (67.89%), Postives = 157/190 (82.63%), Query Frame = 0
Query:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNGVKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN 190
            MA I LAQLL+AGVHFGHKA+RWNPKMFPYIY ERN IHILDL+Q+T+ LK A  + + AS +KQTFLF+GTK+QA++L+A EA++C ++Y+NHRWLGGMLTNWVT+K+RI RL  LE QE    F+ LPKKEAS  K ELEKL+++ NGVK M+K+PDI +IIDQKREI A+KE   L IPIISILDTN
Sbjct:    1 MADISLAQLLEAGVHFGHKAYRWNPKMFPYIYTERNNIHILDLVQSTQLLKEANRYLESASQQKQTFLFIGTKRQASALVAQEAKRCNSYYVNHRWLGGMLTNWVTLKNRIARLKVLEQQEAEGVFNLLPKKEASLRKTELEKLRRHLNGVKDMEKLPDIAIIIDQKREITAVKECRKLGIPIISILDTN 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig74523.15433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1I9LVT4_9PHAE1.380e-12193.1630S ribosomal protein S2, chloroplastic n=1 Tax=Pl... [more]
D1GJH5_FUCVE3.600e-11789.4730S ribosomal protein S2, chloroplastic n=41 Tax=P... [more]
A0A8F0JWX3_9PHAE9.200e-11587.89Ribosomal protein S2 n=1 Tax=Protohalopteris sp. T... [more]
A0A8F0K065_9PHAE1.500e-11489.47Ribosomal protein S2 n=1 Tax=Desmarestia aculeata ... [more]
A0A141BSD4_9PHAE1.990e-11487.3730S ribosomal protein S2, chloroplastic n=12 Tax=S... [more]
A0A7S6U9Z1_9STRA6.640e-9774.2130S ribosomal protein S2, chloroplastic n=1 Tax=Sc... [more]
A0A8E5XRD1_9PHAE8.660e-9572.1130S ribosomal protein S2, chloroplastic n=1 Tax=Is... [more]
A0A2I4Q2U3_9PHAE1.660e-9271.0530S ribosomal protein S2, chloroplastic n=1 Tax=Di... [more]
B7T1S3_VAULI8.300e-8768.4230S ribosomal protein S2, chloroplastic n=1 Tax=Va... [more]
A0A8A6KM53_9STRA1.160e-8567.8930S ribosomal protein S2, chloroplastic n=2 Tax=Co... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 175..186
score: 49.36
coord: 37..46
score: 54.62
coord: 6..24
score: 44.37
coord: 158..175
score: 42.48
coord: 87..104
score: 54.87
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 9..190
e-value: 1.8E-71
score: 239.8
IPR005706Ribosomal protein S2, bacteria/mitochondria/plastidTIGRFAMTIGR01011TIGR01011coord: 4..190
e-value: 8.0E-78
score: 258.7
IPR005706Ribosomal protein S2, bacteria/mitochondria/plastidPANTHERPTHR1253430S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLARcoord: 3..190
IPR005706Ribosomal protein S2, bacteria/mitochondria/plastidHAMAPMF_00291_BRibosomal_S2_Bcoord: 2..190
score: 30.859
NoneNo IPR availableGENE3D1.10.287.610coord: 97..152
e-value: 1.4E-73
score: 248.4
NoneNo IPR availableGENE3D3.40.50.10490coord: 10..190
e-value: 1.4E-73
score: 248.4
NoneNo IPR availablePANTHERPTHR12534:SF028S RIBOSOMAL PROTEIN S2, MITOCHONDRIALcoord: 3..190
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 158..182
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 6..17
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 6..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig74523contigH-paniculata_contig74523:2..571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig74523.15433.1mRNA_H-paniculata_contig74523.15433.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig74523 2..571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig74523.15433.1 ID=prot_H-paniculata_contig74523.15433.1|Name=mRNA_H-paniculata_contig74523.15433.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFL
KRACDFSKRASAKKQTFLFVGTKKQAASLIAIEAQKCGAFYINHRWLGGM
LTNWVTIKSRIDRLNDLEAQEKLNAFSNLPKKEASNLKKELEKLKKYFNG
VKGMKKVPDILVIIDQKREIIAIKEALSLNIPIISILDTN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001865Ribosomal_S2
IPR005706Ribosomal_S2_bac/mit/plastid
IPR018130Ribosomal_S2_CS
IPR023591Ribosomal_S2_flav_dom_sf