prot_H-paniculata_contig7447.15427.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7447.15427.1
Unique Nameprot_H-paniculata_contig7447.15427.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length254
Homology
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BLAST of mRNA_H-paniculata_contig7447.15427.1 vs. uniprot
Match: D8LIB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB4_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 1.940e-106
Identity = 182/253 (71.94%), Postives = 210/253 (83.00%), Query Frame = 0 
Query:    6 DRGAA-ATTVYNPYKIFQAAQRCMGDPSVVAIVLVELLGNCATQDVLMGAAASVLNLYYGKGGLRVCSMTDFGKFAGELAEELGKRNSLEAKQAEEKMKEAQSVYELFEEADTDRSGTISKEEFINFEASIGVTSEAEALXXXXXXXXXXXXXXXXVEWLQYCVPGPGCDKDSFDCAGRHGLRSYSTAINGVSCNWCENLYPVGSKMFACRECDCDACLECAISHLQSCTTRISCERA-------GSSSCSLC 250
            +RGAA A+TVY+PYKIFQAAQRCMGDPSVVA VLVELLG+CAT DVLM +AASVL +YYG GGLR  SMTDFGKFAGELA+ELG RNS    QAEEKMKEAQSVYELFEEADTD SGTISK+EF  F ++I V+S+ EALXXXXXXXXXXXXXXX +EWLQ+CVPGPG D +SF+CAG+HGL+S +   +  +CNWC + +P GS+MF+CRECDCDACLECAI HLQSC TRI CERA        + SC++C
Sbjct:    7 NRGAASASTVYDPYKIFQAAQRCMGDPSVVAKVLVELLGDCATPDVLMASAASVLEIYYGGGGLRKTSMTDFGKFAGELADELGARNST---QAEEKMKEAQSVYELFEEADTDNSGTISKQEFCVFGSNIDVSSDEEALXXXXXXXXXXXXXXXFLEWLQFCVPGPGRDPNSFNCAGQHGLQSCAAPADDTTCNWCGSKWPAGSRMFSCRECDCDACLECAILHLQSCDTRIFCERAVVDPSKTSARSCAVC 256
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7447.15427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIB4_ECTSI1.940e-10671.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..115
NoneNo IPR availableGENE3D1.10.238.10coord: 64..171
e-value: 5.1E-18
score: 67.4
IPR002048EF-hand domainSMARTSM00054efh_1coord: 107..135
e-value: 0.004
score: 26.4
coord: 142..170
e-value: 3.4
score: 13.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 108..167
e-value: 1.6E-9
score: 38.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 138..173
score: 11.194
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 103..131
score: 8.46
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 151..163
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 102..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7447contigH-paniculata_contig7447:3058..9833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7447.15427.1mRNA_H-paniculata_contig7447.15427.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7447 3058..9833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7447.15427.1 ID=prot_H-paniculata_contig7447.15427.1|Name=mRNA_H-paniculata_contig7447.15427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=254bp
MSAFDDRGAAATTVYNPYKIFQAAQRCMGDPSVVAIVLVELLGNCATQDV
LMGAAASVLNLYYGKGGLRVCSMTDFGKFAGELAEELGKRNSLEAKQAEE
KMKEAQSVYELFEEADTDRSGTISKEEFINFEASIGVTSEAEALELFAQV
DSDKNGVISFVEWLQYCVPGPGCDKDSFDCAGRHGLRSYSTAINGVSCNW
CENLYPVGSKMFACRECDCDACLECAISHLQSCTTRISCERAGSSSCSLC
PPPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair