prot_H-paniculata_contig7443.15425.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig7443.15425.1
Unique Name	prot_H-paniculata_contig7443.15425.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	78

Homology

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: D7FV47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV47_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.070e-29
Identity = 68/105 (64.76%), Postives = 71/105 (67.62%), Query Frame = 0

Query:    1 MVASATSAVMILYTSFTATTSFVVFGLLQ----------------------------YKRTSFIVLSIGAVVALSAVMMGGHSLYNFMVPREEGEAEGGFCSVGE 77
            MVASATSAVMILYTSFTATTSF+VFGLL+                            YKRTSFIVLSIGAVVALSAVMMGGHSLYNFM P  + E  GGFCSVGE
Sbjct:    1 MVASATSAVMILYTSFTATTSFMVFGLLEEDYAIALFVVGLAATAVGQVVVNHLVKKYKRTSFIVLSIGAVVALSAVMMGGHSLYNFMFPNPDEEGGGGFCSVGE 105

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: D8LFQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ1_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 3.470e-23
Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 0

Query:    1 MVASATSAVMILYTSFTATTSFVVFGLLQYKRTSFIVLSIGAVVALSAVMMGGHSLYNFMVPREEGEAEGGFCSVG 76
            MV+S+TSAVMIL+TSFTATTSFVVFGLL +KR SFI+LSI +VVALSA +MG + LY+ + P   GE E G CSVG
Sbjct:    1 MVSSSTSAVMILFTSFTATTSFVVFGLLTFKRPSFIILSIASVVALSAFLMGINGLYDIIHPTAGGEEENGICSVG 76

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: A0A836CFF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFF2_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.030e-17
Identity = 53/104 (50.96%), Postives = 66/104 (63.46%), Query Frame = 0

Query:    2 VASATSAVMILYTSFTATTSFVVFGLLQ----------------------------YKRTSFIVLSIGAVVALSAVMMGGHSLYNFMVPREEGEAEGGFCSVGE 77
            VASATSA MIL+TSFTATTSF+VFGLL+                            Y+R+S I++SIGAVVALSA++MGG SLY    PR++ E+ GGFC+ GE
Sbjct:  121 VASATSACMILFTSFTATTSFMVFGLLRRDYAQLMFVVGLLATFVGQVGVNYLVQRYQRSSLIIVSIGAVVALSALLMGGQSLYFLAFPRQDDES-GGFCAAGE 223

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: A0A6H5JFJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ9_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 5.090e-17
Identity = 41/49 (83.67%), Postives = 43/49 (87.76%), Query Frame = 0

Query:   29 QYKRTSFIVLSIGAVVALSAVMMGGHSLYNFMVPREEGEAEGGFCSVGE 77
            +YKRTSFIVLSIGAVVALSAVMMGGHSLYNFM P  + E  GGFCSVGE
Sbjct:  485 KYKRTSFIVLSIGAVVALSAVMMGGHSLYNFMFPNPDEEGAGGFCSVGE 533

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: A0A835ZGS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.300e-16
Identity = 53/104 (50.96%), Postives = 66/104 (63.46%), Query Frame = 0

Query:    2 VASATSAVMILYTSFTATTSFVVFGLLQ----------------------------YKRTSFIVLSIGAVVALSAVMMGGHSLYNFMVPREEGEAEGGFCSVGE 77
            VASATSA MIL+TSFTATTSF+VFGLL+                            Y+R+S I++SIGAVVALSA++MGG SLY    PR++ E+ GGFC+ GE
Sbjct:  421 VASATSACMILFTSFTATTSFMVFGLLRRDYAQLMFVVGLLATFVGQVGVNYLVQRYQRSSLIIVSIGAVVALSALLMGGQSLYFLAFPRQDDES-GGFCAAGE 523

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: A0A7R9YCQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCQ0_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 7.930e-9
Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 0

Query:    2 VASATSAVMILYTSFTATTSFVVFGLLQY----------------------------KRTSFIVLSIGAVVALSAVMMGGHSL 56
            VASATSA MILYTSFTAT+SF+ FG+++Y                            KR S I+LSIG+VV+LS VMMGG SL
Sbjct:  167 VASATSACMILYTSFTATSSFIAFGMVKYDYAIFLFFVGLVATAAGQLGVNYLIKKYKRQSLIILSIGSVVSLSTVMMGGQSL 249

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: A0A7S4DAW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAW5_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 6.190e-8
Identity = 43/87 (49.43%), Postives = 49/87 (56.32%), Query Frame = 0

Query:    2 VASATSAVMILYTSFTATTSFVVFGLLQYK----------------------------RTSFIVLSIGAVVALSAVMMGGHSLYNFM 60
            VASATSAVMILYTSF+A TSFVVFGLL+Y                             R S+I++SIGAVVALS  MMG  S   F+
Sbjct:  392 VASATSAVMILYTSFSAATSFVVFGLLRYDYGFMLFVVGIICTAVGQVGVNYLVKKSGRGSYIIMSIGAVVALSTAMMGLQSAMAFV 478

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: A0A4D9D1X1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.200e-8
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 0

Query:    2 VASATSAVMILYTSFTATTSFVVFGLL----------------------------QYKRTSFIVLSIGAVVALSAVMMGGHSLYN-FMVPREEGEAEGGFCSVGE 77
            VA+A+SA MIL+TSFTATTSF +F LL                            +Y R S+I+ SIGAVV LSA++MG  S+ + F  P   G+A G  C   E
Sbjct:  420 VAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAICDAAE 524

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: A0A6V1T5B1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T5B1_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 6.200e-8
Identity = 43/87 (49.43%), Postives = 49/87 (56.32%), Query Frame = 0

Query:    2 VASATSAVMILYTSFTATTSFVVFGLLQYK----------------------------RTSFIVLSIGAVVALSAVMMGGHSLYNFM 60
            VASATSAVMILYTSF+A TSFVVFGLL+Y                             R S+I++SIGAVVALS  MMG  S   F+
Sbjct:  415 VASATSAVMILYTSFSAATSFVVFGLLRYDYGFMLFVVGIICTAVGQVGVNYLVKKSGRGSYIIMSIGAVVALSTAMMGLQSAMAFV 501

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BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Match: A0A7S2WVP7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVP7_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.040e-6
Identity = 40/104 (38.46%), Postives = 49/104 (47.12%), Query Frame = 0

Query:    2 VASATSAVMILYTSFTATTSFVVFGLLQYK----------------------------RTSFIVLSIGAVVALSAVMMGGHSLYNFMVPREEGEAEGGFCSVGE 77
            VASATSA MI+YTSFTA TSF VFGLL+                              R S I+ S+ AVV +SAV+MG HS+             G  C+ G+
Sbjct:   73 VASATSATMIMYTSFTAMTSFYVFGLLKMDYAVICLILGLCVTFVGQIGLTILIKKLGRDSLIIFSVAAVVGVSAVLMGTHSIIQLASAPSLSGGGGAICAKGD 176

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig7443.15425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
D7FV47_ECTSI	1.070e-29	64.76	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LFQ1_ECTSI	3.470e-23	68.42	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CFF2_9STRA	4.030e-17	50.96	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JFJ9_9PHAE	5.090e-17	83.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835ZGS5_9STRA	3.300e-16	50.96	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7R9YCQ0_9STRA	7.930e-9	49.40	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A7S4DAW5_HETAK	6.190e-8	49.43	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A4D9D1X1_9STRA	6.200e-8	40.95	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A6V1T5B1_HETAK	6.200e-8	49.43	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
A0A7S2WVP7_9STRA	1.040e-6	38.46	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..57
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..28
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 58..77
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 29..34
None	No IPR available	TMHMM	TMhelix		coord: 6..28
None	No IPR available	TMHMM	TMhelix		coord: 35..57

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig7443	contig	H-paniculata_contig7443:7218..10068 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig7443.15425.1	mRNA_H-paniculata_contig7443.15425.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig7443 7218..10068 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig7443.15425.1 ID=prot_H-paniculata_contig7443.15425.1|Name=mRNA_H-paniculata_contig7443.15425.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
MVASATSAVMILYTSFTATTSFVVFGLLQYKRTSFIVLSIGAVVALSAVM
MGGHSLYNFMVPREEGEAEGGFCSVGE*