prot_H-paniculata_contig743.15413.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig743.15413.1
Unique Nameprot_H-paniculata_contig743.15413.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length729
Homology
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BLAST of mRNA_H-paniculata_contig743.15413.1 vs. uniprot
Match: D8LH88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH88_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 5.280e-50
Identity = 226/506 (44.66%), Postives = 284/506 (56.13%), Query Frame = 0 
Query:  245 KKKNV-ADPETTAAEKVLTLLELGLVDKEDVTTYYEALANLERTTREAKEATTLAMNKSAAT----ATTPVYFPGKQDPASLVPFPAICAALGAAGMHSLQLSSDADTIASVCGGTAGAVVGGLLVIGDDPVGGFARAAGAAVARAIGFAGGWAGKEVSAXXXXXXXXXXXXXEEALVKAPANAAAAVGRSILEIVSLGVAYVLGLPGQLARNTFEGVKGTVINASETAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXVKVSPKEASKKLQEVVDTVSSPDKIIEA----ATSLLKRSSSRKVEQAGPAAAKVGSAVTSMGMKPASEANGDKDSAGIAAEELEAKMSSVQEALERFDAVKSRIENARTSATLREAMSMTRNLDPKAVREQSGDARSVVAETEENMASRRTRSPS-------PAISDK-----PKPIQKPESLKIMDDDRRKRIAENLLGKASQGAQDARATLKMAVVAAR-ESSDCARDSAVAPPDTGVTHATPTE 728
            KKK + A PETTAAEKVLTL+E+GLVDKE+ +TYYEAL++LERTT+EAK                 + +P  F  ++ P SLVPFPA+CAALGAAG HSL L+    T  SV G  AG  +GGL+VIGDDP+G  ARAAG A+AR+ G AG         XXXXXXXXXXXXX                             V  LPG +A    +G +G + + SE    XXXXXXXXXXXXXXXXXXXXXXXXXXX           L    D VSSP K + A    A+SL+ +      ++A PAA    +         A+     ++  GI  +ELEAKMSSV++ALERFD VKSRIE A TS T+R+ +SMTR +D  A RE++ +AR+      E   +   +S S       P+++       PKP       K MD DRRK++AE LL KASQ A +A+A LK A  ++R E+ +    S  A P  G    TP E
Sbjct:  197 KKKGLKAGPETTAAEKVLTLVEIGLVDKEEASTYYEALSDLERTTQEAKAXXXXXXXXXXXXXXXXSASP--FSPQEGPLSLVPFPAVCAALGAAGTHSLHLAGALGTAFSVFGAVAGVALGGLVVIGDDPLGRAARAAGLALARSAGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTALPGAVATKAADGARGALQDTSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLN---DAVSSPGKTLTALASGASSLVAQQIESSKKKARPAAPAASTKKAPQASTAAASVEEKQEPEGIPIDELEAKMSSVRKALERFDTVKSRIEEANTSDTMRKTVSMTRGMDMSAEREKNEEARAAAERPNEARVNGNKKSTSARPGGEMPSVASTTTTRAPKP-------KTMDQDRRKQVAEKLLEKASQRATEAKAGLKAAAASSRREAENTQAASPTATPIGGADKKTPQE 690
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig743.15413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH88_ECTSI5.280e-5044.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 574..604
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig743contigH-paniculata_contig743:18772..26150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig743.15413.1mRNA_H-paniculata_contig743.15413.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig743 18630..27425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig743.15413.1 ID=prot_H-paniculata_contig743.15413.1|Name=mRNA_H-paniculata_contig743.15413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=729bp
MKGQLGCVTCDQHRFHAAWSGVIILLLSTQGTGFLSPPACPSSLTRQFSK
ARYTAVVRRVVVTGGGAKGQHQLDVDCTTVGPTATAVAAATTPTFGTMPQ
GGKSAATENVTGKETTSSAQPSRLPADLEKDNEKLRTHAKKEGSARPSGN
QPGIDRDMTKNDAISDTTDIAKGKGVAKIVTDETSRERAEEANAAVKQKP
VVARSWSIGDNAVEPPDAARVDTTEGINDVDSKILGKKTVSRPTKKKNVA
DPETTAAEKVLTLLELGLVDKEDVTTYYEALANLERTTREAKEATTLAMN
KSAATATTPVYFPGKQDPASLVPFPAICAALGAAGMHSLQLSSDADTIAS
VCGGTAGAVVGGLLVIGDDPVGGFARAAGAAVARAIGFAGGWAGKEVSAT
AAGAAGAAVSAAEEALVKAPANAAAAVGRSILEIVSLGVAYVLGLPGQLA
RNTFEGVKGTVINASETAVSLPGGLAKKAADVAGETIQNTSEAAVSAVKV
SPKEASKKLQEVVDTVSSPDKIIEAATSLLKRSSSRKVEQAGPAAAKVGS
AVTSMGMKPASEANGDKDSAGIAAEELEAKMSSVQEALERFDAVKSRIEN
ARTSATLREAMSMTRNLDPKAVREQSGDARSVVAETEENMASRRTRSPSP
AISDKPKPIQKPESLKIMDDDRRKRIAENLLGKASQGAQDARATLKMAVV
AARESSDCARDSAVAPPDTGVTHATPTE*
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