prot_H-paniculata_contig74189.15401.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig74189.15401.1
Unique Nameprot_H-paniculata_contig74189.15401.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length78
Homology
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: D1J702_ECTSI (30S ribosomal protein S16, chloroplastic n=32 Tax=Phaeophyceae TaxID=2870 RepID=D1J702_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.120e-46
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
Query:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77
            MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF
Sbjct:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77          
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: A0A1I9LW03_9PHAE (30S ribosomal protein S16, chloroplastic n=2 Tax=Chordariaceae TaxID=66220 RepID=A0A1I9LW03_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 8.260e-40
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0
Query:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77
            MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGK LEELGFYDP+ KTF INRERTI RLANGVQPTEVVKNLL R+ KF
Sbjct:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKALEELGFYDPMNKTFQINRERTIIRLANGVQPTEVVKNLLIRAFKF 77          
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: A0A141BSI6_9PHAE (30S ribosomal protein S16, chloroplastic n=16 Tax=Fucales TaxID=3009 RepID=A0A141BSI6_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 7.650e-36
Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 0
Query:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77
            MLKIRFKR GRKKQPFY+IVVMDV+TKRDGK LEELGFY+PI KT +IN ERTI RL NGVQPTEVVKNLLR+SS F
Sbjct:    1 MLKIRFKRTGRKKQPFYKIVVMDVRTKRDGKALEELGFYNPITKTLNINCERTISRLKNGVQPTEVVKNLLRKSSIF 77          
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: A0A8F0FAS3_9PHAE (Ribosomal protein S16 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAS3_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 4.430e-35
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77
            MLKIRFK  GRKKQPFYRIVVMDV+TKRDGKVLEELGFY+P+ KT HINRERTI RL +G QPTEVVKNLLR++  F
Sbjct:    1 MLKIRFKLCGRKKQPFYRIVVMDVRTKRDGKVLEELGFYNPMNKTLHINRERTISRLNHGAQPTEVVKNLLRKTPGF 77          
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: A0A8F0F7A6_9PHAE (Ribosomal protein S16 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A6_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.740e-32
Identity = 59/77 (76.62%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77
            MLKIRFKR GRKKQPFYRIV+MD KTKRDG V+EELGFY+P+ KTF INR RTI RL NG QPTEV+KNL R+S+ F
Sbjct:    1 MLKIRFKRCGRKKQPFYRIVLMDNKTKRDGNVVEELGFYNPLNKTFQINRVRTIIRLDNGAQPTEVLKNLFRKSNIF 77          
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: A0A8E5XRF9_9PHAE (30S ribosomal protein S16, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRF9_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 8.400e-29
Identity = 51/77 (66.23%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77
            MLKIR KR GRKK+PFYRIV+MD  TKRDGK +EELGFY+P+ K F+INRER I R+  G QPT++V NLL++S  F
Sbjct:    1 MLKIRLKRFGRKKKPFYRIVLMDASTKRDGKAIEELGFYNPLNKIFYINRERIIMRIKTGAQPTQIVSNLLKKSKFF 77          
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: A0A2I4Q2M7_9PHAE (30S ribosomal protein S16, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2M7_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.130e-28
Identity = 55/77 (71.43%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77
            MLKIRFKRGGRKK PFYRIVV++ +TKRDGKV+EELG Y+P+ K   IN  RTI RL +G QPTEVVKNL R+SS F
Sbjct:    1 MLKIRFKRGGRKKHPFYRIVVINNRTKRDGKVIEELGSYNPLTKIIKINLVRTIIRLEDGAQPTEVVKNLFRKSSLF 77          
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: A0A5B9RCU6_9PHAE (30S ribosomal protein S16 n=2 Tax=Laminaria TaxID=33637 RepID=A0A5B9RCU6_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.640e-27
Identity = 51/59 (86.44%), Postives = 56/59 (94.92%), Query Frame = 0
Query:   19 IVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77
            +VVMDV+TKRDGKVLEELGFY+P+ KTFHINRERTI RLANGVQPTEVVKNLLR+SS F
Sbjct:    1 MVVMDVRTKRDGKVLEELGFYNPMDKTFHINRERTILRLANGVQPTEVVKNLLRKSSGF 59          
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: A0A7S6UA28_9STRA (30S ribosomal protein S16, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA28_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.830e-27
Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRS 74
            MLK+R KR GRKK+PFYRIVVM+ KTKRDGK +E+LG+Y+PI KTF +NR RT++RL  GV PT+VVKNLL+++
Sbjct:    1 MLKLRLKRCGRKKRPFYRIVVMNNKTKRDGKAIEQLGYYNPITKTFSLNRLRTLERLEQGVIPTQVVKNLLQKA 74          
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Match: A0A8E5BGR9_9PHAE (Ribosomal protein S16 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5BGR9_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.250e-26
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    1 MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINRERTIKRLANGVQPTEVVKNLLRRSSKF 77
            MLK+R KR GRK QPF++I++MDVKTKRDGK +EELGFY+PI K    N +RTI  L NGVQPTEV+K+LL +S  F
Sbjct:    1 MLKMRLKRCGRKNQPFFKILIMDVKTKRDGKAIEELGFYNPIMKIISFNHKRTIYWLNNGVQPTEVIKDLLNKSPFF 77          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig74189.15401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J702_ECTSI1.120e-46100.0030S ribosomal protein S16, chloroplastic n=32 Tax=... [more]
A0A1I9LW03_9PHAE8.260e-4089.6130S ribosomal protein S16, chloroplastic n=2 Tax=C... [more]
A0A141BSI6_9PHAE7.650e-3683.1230S ribosomal protein S16, chloroplastic n=16 Tax=... [more]
A0A8F0FAS3_9PHAE4.430e-3580.52Ribosomal protein S16 n=1 Tax=Desmarestia aculeata... [more]
A0A8F0F7A6_9PHAE1.740e-3276.62Ribosomal protein S16 n=1 Tax=Protohalopteris sp. ... [more]
A0A8E5XRF9_9PHAE8.400e-2966.2330S ribosomal protein S16, chloroplastic n=1 Tax=I... [more]
A0A2I4Q2M7_9PHAE1.130e-2871.4330S ribosomal protein S16, chloroplastic n=1 Tax=D... [more]
A0A5B9RCU6_9PHAE1.640e-2786.4430S ribosomal protein S16 n=2 Tax=Laminaria TaxID=... [more]
A0A7S6UA28_9STRA5.830e-2767.5730S ribosomal protein S16, chloroplastic n=1 Tax=S... [more]
A0A8E5BGR9_9PHAE2.250e-2664.94Ribosomal protein S16 n=1 Tax=Phaeophyceae sp. Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 8..64
e-value: 5.4E-19
score: 68.0
IPR000307Ribosomal protein S16TIGRFAMTIGR00002TIGR00002coord: 2..75
e-value: 7.0E-30
score: 100.9
IPR000307Ribosomal protein S16PANTHERPTHR1291930S RIBOSOMAL PROTEIN S16coord: 2..74
IPR000307Ribosomal protein S16HAMAPMF_00385Ribosomal_S16coord: 1..74
score: 23.106
IPR023803Ribosomal protein S16 domain superfamilyGENE3D3.30.1320.10coord: 1..77
e-value: 3.7E-27
score: 96.4
IPR023803Ribosomal protein S16 domain superfamilySUPERFAMILY54565Ribosomal protein S16coord: 1..74
NoneNo IPR availablePANTHERPTHR12919:SF31coord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig74189contigH-paniculata_contig74189:273..506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig74189.15401.1mRNA_H-paniculata_contig74189.15401.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig74189 273..506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig74189.15401.1 ID=prot_H-paniculata_contig74189.15401.1|Name=mRNA_H-paniculata_contig74189.15401.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
MLKIRFKRGGRKKQPFYRIVVMDVKTKRDGKVLEELGFYDPIRKTFHINR
ERTIKRLANGVQPTEVVKNLLRRSSKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_S16
IPR023803Ribosomal_S16_dom_sf