prot_H-paniculata_contig74053.15380.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig74053.15380.1
Unique Nameprot_H-paniculata_contig74053.15380.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: E6ZET8_ECTSI (Ribosomal protein L31 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET8_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 7.190e-44
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNVQ 69
            MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNVQ
Sbjct:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNVQ 69          
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: A0A0N9LUM1_9PHAE (Ribosomal protein L31 n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A0N9LUM1_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 3.540e-26
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNV 68
            M+S VK+K FGS+LSDGSF FL LPS+ SQ+ LNY  +D  NHPVWTGKRPKEQTEISLF+ +  K++
Sbjct:    1 MKSIVKAKTFGSLLSDGSFNFLDLPSHFSQKELNYKSLDLNNHPVWTGKRPKEQTEISLFVGKFTKSL 68          
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: A0A0U1XGS1_9PHAE (Ribosomal protein L31 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XGS1_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 4.760e-26
Identity = 51/66 (77.27%), Postives = 52/66 (78.79%), Query Frame = 0
Query:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNK 66
            MQ   KSKLFG+ILSDGS  F  L SYQSQR LN  KID LNHPVWTGKRP EQTEIS FINRLNK
Sbjct:    1 MQLTNKSKLFGNILSDGSLVFRTLSSYQSQRFLNSKKIDLLNHPVWTGKRPSEQTEISSFINRLNK 66          
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: V9PB22_UNDPI (Ribosomal protein L31 n=2 Tax=Undaria pinnatifida TaxID=74381 RepID=V9PB22_UNDPI)

HSP 1 Score: 97.8 bits (242), Expect = 2.050e-25
Identity = 44/68 (64.71%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNV 68
            M+S VKSK+FG+ILSDGSF FL LPS+ SQ+ LN   +D  NHPVWTGKRPKEQTEIS+F+ +  K++
Sbjct:    1 MKSTVKSKIFGNILSDGSFNFLNLPSFHSQKELNCKNLDLNNHPVWTGKRPKEQTEISIFVGKFIKSL 68          
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: A0A8F0K1A9_9PHAE (Ribosomal protein L31 n=1 Tax=Dictyoneurum californicum TaxID=169784 RepID=A0A8F0K1A9_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.100e-25
Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNVQ 69
            M+  +K+K FGS+LSDGSF FL LPSY SQ+ LN   +D  NHPVWTGKRPKEQTEISLF+ +  K++Q
Sbjct:    1 MKCRIKNKTFGSVLSDGSFNFLILPSYSSQKELNCKSVDLNNHPVWTGKRPKEQTEISLFVGKFTKSLQ 69          
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: A0A8E8PFJ7_9PHAE (Ribosomal protein L31 n=5 Tax=Alaria TaxID=2888 RepID=A0A8E8PFJ7_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 4.130e-25
Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNV 68
            M+S +KSK FG+ILSDGSF FL LPSY SQ+ L+   +D  NHPVWTGKRPKEQTEISLF+ +  K++
Sbjct:    1 MKSVLKSKTFGNILSDGSFNFLSLPSYSSQKELHCKNLDLNNHPVWTGKRPKEQTEISLFVGKFTKSL 68          
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: W5RG43_COSCS (Ribosomal protein L31 n=4 Tax=Laminariales TaxID=2886 RepID=W5RG43_COSCS)

HSP 1 Score: 96.3 bits (238), Expect = 8.570e-25
Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNVQ 69
            M+  +  K FGS+LSDGSF FL LPSY SQ+ LNY  +D  NHPVWTGKRPKEQTEISLF+ +  K+++
Sbjct:    1 MKWAINKKKFGSVLSDGSFNFLVLPSYLSQKELNYKPLDLNNHPVWTGKRPKEQTEISLFVGKFTKSLK 69          
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: A0A8F0K1D7_9PHAE (Ribosomal protein L31 n=2 Tax=Alariaceae TaxID=2887 RepID=A0A8F0K1D7_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.190e-24
Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNV 68
            M+  VKSK+FG+ILSDGSF FL LP++ SQ+ LN   +D  NHPVWTGKRPKEQTEISLF+++  K++
Sbjct:    1 MKLIVKSKIFGNILSDGSFNFLSLPTHSSQKELNCKTLDLNNHPVWTGKRPKEQTEISLFVSKFTKSL 68          
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: S4S3U3_LAMHY (Ribosomal protein L31 n=3 Tax=Laminaria TaxID=33637 RepID=S4S3U3_LAMHY)

HSP 1 Score: 94.7 bits (234), Expect = 3.400e-24
Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNKNV 68
            M+  VK+K FGS+LS+GSF F+ LPSY SQ+ L+Y  +D  NHPVWTGKRPKEQTEISLF+ +  K++
Sbjct:    1 MKLAVKTKTFGSVLSNGSFSFITLPSYFSQKELSYKSLDLNNHPVWTGKRPKEQTEISLFVGKFTKSL 68          
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Match: A0A0U1XCD8_SCYLO (Ribosomal protein L31 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1XCD8_SCYLO)

HSP 1 Score: 94.4 bits (233), Expect = 4.580e-24
Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    7 SKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNK 66
            SK FG+ILSDGSF FL LPS+ SQ+SLN  KID L+HPVWTGKRP EQTEIS FINRL K
Sbjct:    7 SKTFGNILSDGSFTFLILPSFNSQKSLNSKKIDLLSHPVWTGKRPVEQTEISSFINRLKK 66          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig74053.15380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZET8_ECTSI7.190e-44100.00Ribosomal protein L31 n=2 Tax=Ectocarpus siliculos... [more]
A0A0N9LUM1_9PHAE3.540e-2666.18Ribosomal protein L31 n=2 Tax=Laminariaceae TaxID=... [more]
A0A0U1XGS1_9PHAE4.760e-2677.27Ribosomal protein L31 n=1 Tax=Colpomenia peregrina... [more]
V9PB22_UNDPI2.050e-2564.71Ribosomal protein L31 n=2 Tax=Undaria pinnatifida ... [more]
A0A8F0K1A9_9PHAE2.100e-2563.77Ribosomal protein L31 n=1 Tax=Dictyoneurum califor... [more]
A0A8E8PFJ7_9PHAE4.130e-2564.71Ribosomal protein L31 n=5 Tax=Alaria TaxID=2888 Re... [more]
W5RG43_COSCS8.570e-2562.32Ribosomal protein L31 n=4 Tax=Laminariales TaxID=2... [more]
A0A8F0K1D7_9PHAE1.190e-2463.24Ribosomal protein L31 n=2 Tax=Alariaceae TaxID=288... [more]
S4S3U3_LAMHY3.400e-2461.76Ribosomal protein L31 n=3 Tax=Laminaria TaxID=3363... [more]
A0A0U1XCD8_SCYLO4.580e-2476.67Ribosomal protein L31 n=1 Tax=Scytosiphon lomentar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig74053contigH-paniculata_contig74053:405..614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig74053.15380.1mRNA_H-paniculata_contig74053.15380.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig74053 405..614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig74053.15380.1 ID=prot_H-paniculata_contig74053.15380.1|Name=mRNA_H-paniculata_contig74053.15380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKR
PKEQTEISLFINRLNKNVQ*
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