prot_H-paniculata_contig7394.15368.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7394.15368.1
Unique Nameprot_H-paniculata_contig7394.15368.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
[Close]
BLAST of mRNA_H-paniculata_contig7394.15368.1 vs. uniprot
Match: D7G719_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G719_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 3.510e-14
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0 
Query:   26 LLRQESTGLSAVTALLERVRMGMEEEDGVRSILHGIRGACAPPS 69
            +++QESTGLSAVTALLER+RMG+EEE G R+IL GIRGACAPPS
Sbjct:    1 MIKQESTGLSAVTALLERLRMGLEEEAGTRTILQGIRGACAPPS 44
[Close]
BLAST of mRNA_H-paniculata_contig7394.15368.1 vs. uniprot
Match: A0A835Z3F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3F5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.140e-7
Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:    8 EAVVNSATAVDAVGLCTQLLRQESTGLSAVTALLERVRMGMEEEDGVRSILHGIRGACAPPS 69
            EAVV +  A DA+ LC  LLR E++ L+A TAL+ER+R+G+E++ GV  I+  I     P S
Sbjct:    3 EAVVAAPCAADAIQLCRPLLRHEASALAAGTALMERIRLGLEDKAGVTLIMRAITMQSLPHS 64
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7394.15368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G719_ECTSI3.510e-1479.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z3F5_9STRA2.140e-746.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7394contigH-paniculata_contig7394:1689..10788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7394.15368.1mRNA_H-paniculata_contig7394.15368.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7394 1689..10788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7394.15368.1 ID=prot_H-paniculata_contig7394.15368.1|Name=mRNA_H-paniculata_contig7394.15368.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
MESDFVLEAVVNSATAVDAVGLCTQLLRQESTGLSAVTALLERVRMGMEE
EDGVRSILHGIRGACAPPS
back to top