prot_H-paniculata_contig737.15341.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig737.15341.1
Unique Nameprot_H-paniculata_contig737.15341.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length281
Homology
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: D8LKV0_ECTSI (High mobility group protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV0_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.090e-85
Identity = 134/169 (79.29%), Postives = 146/169 (86.39%), Query Frame = 0
Query:   49 AYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDTTRYREAMVAWKAGDMAA 217
            AYKKAPDAPRRGRSAYVLFSM+ARE+VK  LP G+KVTEVMKGIAAKWREL++ +K  W  KA +DK RYE ELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLR+TYPEAKN+DMSKMLGQEWNRM++ EK PY+ KA  DT RYREAM  WK G   A
Sbjct:   46 AYKKAPDAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTLRYREAMTVWKDGGADA 214          
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: A0A024U6C4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U6C4_9STRA)

HSP 1 Score: 184 bits (466), Expect = 5.340e-54
Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = 0
Query:   48 RAYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDTTRYREAMVAW 210
            R  KKAP AP+RG+S Y+LFSMD RE++KA + P AKVT+VM+ IA  W ++++DEKA W   A  DK RYE E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + E KN ++SK LG+ W + T+A+KAP+  K + D  RY+  M  W
Sbjct:   28 RLQKKAPGAPKRGKSPYILFSMDKREEIKATMAPNAKVTDVMRAIADAWSKMSEDEKAPWKTAAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKSEHQEMKNTEISKQLGEAWGKATKAQKAPFVEKEKEDRARYKREMEEW 190          
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: F0W3U4_9STRA (High mobility group protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0W3U4_9STRA)

HSP 1 Score: 183 bits (465), Expect = 8.260e-54
Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = 0
Query:   48 RAYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDTTRYREAMVAW 210
            R  KKAP AP+RG+S Y+LFSMD RE++K+ +P  AKVT+VM+ IA  W ++++DEK  W   A  DK RYE E++ YDGPL+VPNKRAKKDP APKRA SAFL +SQ MRP+L+   P+ KN D+SK LG+ W++ T+ +KAPY  K   D +RY+  M  W
Sbjct:   28 RLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDEKQPWKSAAEVDKQRYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKEREDRSRYKREMEEW 190          
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: A0A067C9M6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9M6_SAPPC)

HSP 1 Score: 181 bits (460), Expect = 4.010e-53
Identity = 88/165 (53.33%), Postives = 120/165 (72.73%), Query Frame = 0
Query:   48 RAYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDTTRYREAMVAWKA 212
            R  KKAP AP+RG+S Y+LFSMD RE++KA +PP +KVT+VM+ IA  W +++++EKA W   A  DK RYE E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + T+A+KAP+  K + D  RY+  M  W +
Sbjct:   24 RLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEWNS 188          
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: A0A1V9ZRB9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRB9_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.390e-52
Identity = 90/165 (54.55%), Postives = 121/165 (73.33%), Query Frame = 0
Query:   48 RAYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDTTRYREAMVAWKA 212
            R  KKAP AP+RG+S Y+LFSMD RE++KA +PP +KVT+VM+ IA  W ++++DEKA W   A  DK RYE E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  +P+ KN ++SK LG+ W + T+A+KAP+  K + D  RY+  M  W +
Sbjct:   23 RLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIAEAWSKMSEDEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHPDMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEWNS 187          
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: A0A8K1CAL6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAL6_PYTOL)

HSP 1 Score: 179 bits (454), Expect = 3.110e-52
Identity = 89/163 (54.60%), Postives = 117/163 (71.78%), Query Frame = 0
Query:   48 RAYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDTTRYREAMVAW 210
            R  KKAP AP+RG+S Y+LFSMD RE +KA L   AKVT++M+ IA  W +++DD+K  W   A +DK RYE E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  +P+ KN ++SK LG+ W + TEA+KAP+  K + D  RY+  M  W
Sbjct:   27 RLQKKAPGAPKRGKSPYILFSMDKREAIKATLGADAKVTDIMRAIANAWAKMSDDDKQPWKLAAEQDKQRYEEEMASYDGPLRVPNKRAKKHPEAPKRASSAFLFYSQVMRPRIKADHPDMKNTEISKQLGEAWGKATEAQKAPFIEKEKEDRDRYKREMEEW 189          
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: K3WVY6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVY6_GLOUD)

HSP 1 Score: 177 bits (450), Expect = 1.280e-51
Identity = 87/168 (51.79%), Postives = 118/168 (70.24%), Query Frame = 0
Query:   48 RAYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDTTRYREAMVAWKAGDM 215
            R  KKAP AP+RG+S Y+LFSMD RE +KA +P  AKVT+VM+ IA  W +++DD+K  W   A  DK RYE E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W++ T+ +KAP+  K + D  RY+  M  W +  +
Sbjct:   25 RLQKKAPGAPKRGKSPYILFSMDKREDIKATMPENAKVTDVMRAIADAWAKMSDDDKQPWKAAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWSKATDEQKAPFVEKEKLDRARYKREMEEWNSNKI 192          
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: A0A397DXE2_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DXE2_9STRA)

HSP 1 Score: 181 bits (460), Expect = 4.560e-51
Identity = 89/163 (54.60%), Postives = 117/163 (71.78%), Query Frame = 0
Query:   48 RAYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDTTRYREAMVAW 210
            R  KKAP AP+RG+S Y+LFSMD RE++K+ + P AKVT+VM+ IA  W ++++DEKA W   A  DK RYE E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + E KN ++SK LG+ W + T+A+KAP+  K   D  RY+  M  W
Sbjct:   28 RLQKKAPGAPKRGKSPYILFSMDKREEIKSTMAPNAKVTDVMRAIADAWSKMSEDEKAPWKTAAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKSEHQEMKNTEISKQLGEAWGKATKAQKAPFVEKELVDRARYKREMEEW 190          
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: A0A2D4CA86_PYTIN (High mobility group protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CA86_PYTIN)

HSP 1 Score: 178 bits (451), Expect = 1.310e-50
Identity = 92/172 (53.49%), Postives = 121/172 (70.35%), Query Frame = 0
Query:   48 RAYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNK---------AETDTTRYREAMVAW 210
            R  KKAP AP+RG+S Y+LFSMD RE++KA LPP AKVTE+M+ IA  W ++ D++K  W   A +DK RYE E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++   P+ KN ++SK LG+ W++ T+A+KAP+  K         AE D  RY E M ++
Sbjct:   27 RLQKKAPGAPKRGKSPYILFSMDKREEIKATLPPDAKVTEIMRAIADVWSKMTDEDKHPWRIAAEQDKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAENPDMKNTEISKQLGEAWSKATDAQKAPFMEKEREDRARIAAEQDKQRYEEEMASY 198          
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Match: A0A5D6YAG9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAG9_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.200e-50
Identity = 85/168 (50.60%), Postives = 117/168 (69.64%), Query Frame = 0
Query:   48 RAYKKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELNDDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDTTRYREAMVAWKAGDM 215
            R  KKAP AP+RG+S Y+LFSMD RE++KA +P  +KVT+VM+ IA  W ++ D++K  W   A  DK RYE E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + T+ +KAP+  K + D  RY+  M  W +  +
Sbjct:   50 RLQKKAPGAPKRGKSPYILFSMDKREEIKATMPDNSKVTDVMRAIADAWAKMTDEDKQPWKAAAESDKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKLDRARYKREMEEWNSNKV 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig737.15341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV0_ECTSI1.090e-8579.29High mobility group protein n=2 Tax=Ectocarpus Tax... [more]
A0A024U6C4_9STRA5.340e-5455.21Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
F0W3U4_9STRA8.260e-5455.21High mobility group protein putative n=2 Tax=Albug... [more]
A0A067C9M6_SAPPC4.010e-5353.33Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A1V9ZRB9_9STRA1.390e-5254.55Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A8K1CAL6_PYTOL3.110e-5254.60Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WVY6_GLOUD1.280e-5151.79Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A397DXE2_9STRA4.560e-5154.60Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A2D4CA86_PYTIN1.310e-5053.49High mobility group protein putative n=1 Tax=Pythi... [more]
A0A5D6YAG9_9STRA2.200e-5050.60Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 195..215
score: 23.63
coord: 158..176
score: 26.71
coord: 87..109
score: 23.51
coord: 176..195
score: 37.78
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 22..126
coord: 133..212
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 56..127
e-value: 9.0E-16
score: 68.4
coord: 142..212
e-value: 3.1E-22
score: 89.9
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 57..125
e-value: 2.0E-15
score: 57.0
coord: 143..211
e-value: 2.9E-20
score: 72.4
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 57..126
score: 16.957
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 143..211
score: 18.188
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 38..129
e-value: 1.6E-21
score: 78.3
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 130..213
e-value: 1.0E-23
score: 85.4
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 50..126
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 127..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig737contigH-paniculata_contig737:28779..32392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig737.15341.1mRNA_H-paniculata_contig737.15341.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig737 27188..32850 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig737.15341.1 ID=prot_H-paniculata_contig737.15341.1|Name=mRNA_H-paniculata_contig737.15341.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=281bp
MAMVHHNQMQNHNGGEEEDEEDYDEEEGGDMGAGGGSGKSPAKKRKKRAY
KKAPDAPRRGRSAYVLFSMDAREKVKADLPPGAKVTEVMKGIAAKWRELN
DDEKALWAEKALEDKSRYELELSVYDGPLKVPNKRAKKDPLAPKRAMSAF
LHFSQSMRPRLRDTYPEAKNVDMSKMLGQEWNRMTEAEKAPYKNKAETDT
TRYREAMVAWKAGDMAAGGDDVHFVYCTPRGALGSRRIFDIHSAVSVIFP
HMISQPRLFKPEERTIFGFWWIQADILELM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf