prot_H-paniculata_contig735.15322.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig735.15322.1
Unique Nameprot_H-paniculata_contig735.15322.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1212
Homology
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: A0A6H5KZ42_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ42_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 2.920e-174
Identity = 592/1280 (46.25%), Postives = 661/1280 (51.64%), Query Frame = 0
Query:    1 MNPNKRPPPSSSSGAFEGGDGLI----HRDAKILRPGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADMQEMYSGCNLIRVGYSNLQNVTVKANTERSWDFNIGPPLEGAFPPGTTSPSPHR---IGSAGI-----SSASPSATSHITKPLNSSSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGSYAPPASSYGQQSYHAPYGHGPPPPYAQQSYNPSXXXXXXXXXXPHMTPPHGXXXXXXXXXXXXXXXXXXAAGRGMPSGXXXXXXXSSVSGVGVGSYNSRPALPPQSPQXXXXXXXXXXXXXXXSPNMMSPQQGGPYGSIPYSSDRGPGGYGSIGGGXXXXXXXXFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------GLLQAPLNHRHLASAAHDNGYGHANRPPMRYRLQDKKSSGGAA-GGATKPRLRMPLLDPKHIQALTLMATTAVAAKKSARRGSLEVEGEAQEPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGQKRANKREAAEMLGPNAAADQLAAATAKVRVSDSHAPSGGADGSGEAAVVDRESKRVNKREAAEMLGADEADQLAAATAKVRVSDDTEEEVAEESKRAQGEIKDGKNGDQTSKVMEETVVGNEAASVVAGEDATGVSVASGEGKQGSENKKRNLSTRGVGGGQRGNDVREEGICNI---LRRGREGGG-DAGASGNERGAVKKGSEKAVSTGASKEGGNEEAVNGAETVDTQDSASPSAAGG-DTGGQMGEGEGGRNAVASSRGGSSRSERWGQKAQAVGERRPATTAGTAVPPPLNGSPKSDGISPSLAIIDTTVTGTAKISRRQSEEADGEE------VEXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVDVGAWAAAAPAERSPILMVLHVDAHEVSPAAICQLFGLYGDVMKVKLVSSRGMALVQMRYAVQAMNAQRLLDQTPLCGMVLEVKASSQWTINDPTATDFGACGEVHR--------YKTVPSPEDSRYRDGLSPPCPTLVIDNVSPDVSAEEITSIFVKHGVVSSVDLDTRPDAPV--------VQGNAAEP-KPSVQALVHMEADGRIGATEAAMHALIMTHNLELRARRLRVSFLSGDRHVEK 1211
            MNPNKRPPPSSS+G FEGGD       H D KILRPGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKV+KIVMFDKGSG QALVQM +VH+AM+AHEAADMQEMYSGCNLIRVGYSNLQNVTVK NTERSWDFNIGPPLEG+ PPG T P+P     +G+ G      +SASP      T P ++S  H                              XXXXXXXXXXXXXXXXX           XXXXXX                           GSY  P  SY QQ Y  PYG    PP++QQ     XX              HG                     RG  S XXXXXXX            SRP     S                   N+M   Q GPYGSIP+SS+R PGG+GS+G G  XXXXXX  XXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXX                            GLLQAP+ HR      HDNG     R  MR+R  DKK +  AA GGA KPR R+P LDP  IQALT  A  A   KKS R+   E   E +E                                                 +G K ANKREAAEMLGP+A  +QLAAATAKV +                       KR                         RVSDD + E A  S       KD + GD   K           A  V  +D         EG++G   K+    T G GGG  G +   EG+      LR G  GGG D       +GA     EKA + G        E   G +   +Q++      G     G  G  E G              E    + +A GE +            L    + +G S     ++    G  +  R+ S+ A+GE         XXXXXXXXXXXXXXXXXXXXXXXXXX E VDVGAWAAA P  RSPI+MV HVD  EVSP A C LFGLYGDVMKVK+V+SRGMALVQMRY VQA NAQRLLDQTPL GM LEVK SSQWTINDPTATDF     +HR        + T P+P+D RYRD LSPPCPTLV+DNVSPDV+AE ITSIF KHG VSSVDLDT   AP+          G+ AEP KPSVQALVHMEADG++ ATEAA+HALIMTHNL L  RRLRVSFLSG  H+EK
Sbjct:    1 MNPNKRPPPSSSTGTFEGGDATKRARDHPD-KILRPGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVDKIVMFDKGSGSQALVQMANVHSAMSAHEAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIGPPLEGSLPPGVT-PAPTAAPGVGADGYRGAPAASASPVTQGPPTPPSSTSHRHTPQQSYSSQQYSPYSAAQQPQATPYAPPAQXXXXXXXXXXXXXXXXXPSTYSPQHQQQXXXXXXPYGNVIPSG----------------GGGSYTSP--SYIQQGYAPPYGQTSTPPFSQQXXXXXXXGQ------------HGYSSR--------------GGARGGSSDXXXXXXXXXXXXXXXXXXYSRPXXXHASTNYYTSPAN----------NVMPQPQSGPYGSIPFSSERSPGGFGSMGMGGGXXXXXXXXXXXXXXXXARAIPYSGRPGXXXXXXXXXXXXXXXXXXXXXXXQGRAAAGRGPPLGSGXXXXXXXXXXXXSGLLQAPM-HRQGPMFPHDNGNY---RSQMRFRSSDKKPTTNAAPGGAIKPRSRVPRLDPVQIQALTAAAALA---KKSVRQPKSEEIVEGKESGSKTATLAGRGGGGGDGKTLSGFVKEGAGSSGG---------------SGNKTANKREAAEMLGPDAT-EQLAAATAKVFLE----------------------KRXXXXXXXXXXXXXXXXXXXXXXXXXRVSDDGDGEEASLSAE-----KDVEAGDSLEKAGSRQDESKRKACTVEVDD---------EGEKGYSGKR----TAGAGGGSVGEEALVEGVVTRRGGLRSGSRGGGKDFPPEDKAKGAGVALEEKAKADGV-------EVAEGKDPSTSQETGEEKVEGATQCDGTTGNAEEGEQXXXXXXXXXXXXE---PEVEAGGEDKXXXXXXXXXXK-LEAGDEVEGRSKGRCEVEA---GEKQGERKASDGAEGETKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKIVASRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRQSCWDRFAFSTTPTPDDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGPVSSVDLDTHAKAPLDTISARASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGKHHIEK 1147          
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: D7FN53_ECTSI (PTB (HnRNP) homolog family member (Ptb-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN53_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 6.860e-102
Identity = 454/1249 (36.35%), Postives = 510/1249 (40.83%), Query Frame = 0
Query:   28 KILRPGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADMQEMYSGCNLIRVGYSNLQNVTVKANTERSWDFNIGPPLEGAFPPGTTSPSPHRIGSAGISSASPSATSHITKPLNSSSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGSYAPPASSYGQQSYHAPYGHGPPPPYAQQSYNPSXXXXXXXXXXPHMTPPHGXXXXXXXXXXXXXXXXXXAAGRGMPSGXXXXXXXSSVSGVGVGSYNSRPALPPQSPQXXXXXXXXXXXXXXXSPNMMSPQQGGPYGSIPYSSDRGPGGYGSIGGGXXXXXXXXFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------GLLQAPLNHRHLASAAHDNGYGHANRPPMRYRLQDKKSSGGAA-GGATKPRLRMPLLDPKHIQALTLMATTAVAAKKSARRGSLEVEGEAQEPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGQKRANKREAAEMLGPNAAADQLAAATAKVRVSDSHAPSGGADGSGEAAVVDRESKRVNKREAAEMLGADEADQLAAATAKVRVSDDTEEEVAEESKRAQGEIKDGKNGDQTSKVMEETVVGNEAASVVAGEDATGVSVASGEGKQGSENKKRNLSTRGVGGGQRGNDVREEGICNILRRGREGGGDAGASGNERGAVKKGSEKAVSTGASKEGGNEEAVNGAETVDTQDSASPSAAGGDTGGQMGEGEGGRNAVASSRGGSSRSERWGQKAQAVGERRPATTAGTAVPPPLNGSPKSDGISPSLAIIDTTVTGTAKIS--------------------RRQSEEADGEEVEXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------EVVDVGAWAAAAPAERSPILMVLHVDAHEVSPAAICQLFGLYGDVMKVKLVSSRGMALVQMRYAVQAMNAQRLLDQTPLCGMVLEVKASSQWTINDPTATDFGACGEVHRYKTVPSPEDSRYRDGLSPPCPTLVIDNVSPDVSAEEITSIFVKHGVVSSVDLDTRPDAPV--------VQGNAAEP-KPSVQALVHMEADGRIGATEAAMHALIMTHNLELRARRLRVSFLSGDRHVEK 1211
            KILRPGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKV+KIVMFDKGSG QALVQM +VHTAM+AHEAADMQ                                                                                                                                                                                                                                                                                                                 GPYGSIP+SS+R PGG+GS+G GXXXXXXXX  XXXXXXXXXXXXXX            XXXXXXXXXXXXXXXX                        GLLQAP+ HR      HDNG     R  MR+R  DKK +  AA GGA KPR R+P LDP  IQALT  A  A   KKS R+   E   E +E                                                 +G K ANKREAAEMLGP+A  +QLAAATAKV +                       KR                         RVSDD + E A  S       KD + GD + K           A  V G++         EG++GS  +     T G GGG  G +   EG+                    RG ++ GS     TG  K+   E+    AE V               G ++ EGE        S+   +  E+  + AQ  G    A     A     +G                      K+                     + + E  DG E E   XXXXXXXXXXXXXXXXXXXXXXXX           E VDVGAWAAA P  RSPI+MV HVD  EVSP A C LFGLYGDVMKVKLV+SRGMALVQMRY VQA NAQRLLDQTPL GM +EVK SSQWTINDPTATDF     +HR+ T P+PED RYRD LSPPCPTLV+DNVSPDV+AE ITSIF KHG VSSVDLDT   AP+          G+ AEP KPSVQALVHMEADG++ ATEAA+HALIMTHNL L  RRLRVSFLSG+ H+EK
Sbjct:   76 KILRPGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVDKIVMFDKGSGSQALVQMANVHTAMSAHEAADMQS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPYGSIPFSSERSPGGFGSMGMGXXXXXXXXXXXXXXXXXXXXXXXXARAIPHSGRPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXSGLLQAPM-HRQGPMFLHDNGNY---RSQMRFRSSDKKPTTNAAPGGAIKPRSRVPRLDPVQIQALTAAAAVA---KKSVRQPKSEENVEGKESGSEATVVAGRGGGGGDGKTLSGFVKEGAGSSGG---------------SGNKTANKREAAEMLGPDAT-EQLAAATAKVFLE----------------------KRXXXXXXXXXXXXXXXXXXXXXXXXXRVSDDGDGEDASLSAG-----KDVEAGDSSEKAGSRQDESKRKACAVEGDN---------EGEKGSGKR-----TAGAGGGSVGEEAPVEGVV-----------------TRRGGLRSGS-----TGGGKDFPPEDKTK-AEDVXXXXXXXX------XGVEVAEGED------PSKSQETGEEKVEEAAQCDGPTGNAEEGKQAENVENDGETXXXXXXXXXXXXXXXXXXXXKLEAGDEVDDXXXXXXXXEGGEKQGEGEAGDGAEGETKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKLVASRGMALVQMRYPVQAANAQRLLDQTPLSGMTIEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTASALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGEHHIEK 921          
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: A0A7S2XYL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYL8_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.930e-33
Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = 0
Query:   26 DAKILRPGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADMQEMYSGCNLIRVGYSNLQNVTVKANTERSWDFNIG 135
            D  +LRPG   P NVLLVRV++I +PV + AL  IFSRFG+V K+V+FDKGSGFQALVQ      A  A ++ D+Q+MY+ CN IRVGYSNL N+TVK N++RSWDF  G
Sbjct:   53 DQPMLRPGSTTPSNVLLVRVSNIFYPVQLDALHTIFSRFGEVQKVVLFDKGSGFQALVQYASEEPAKLAFDSVDLQDMYTNCNTIRVGYSNLNNITVKQNSDRSWDFTTG 162          
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: A0A7S3UWL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL0_HETAK)

HSP 1 Score: 131 bits (330), Expect = 2.120e-28
Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 0
Query:   30 LRPGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADMQEMYSGCNLIRVGYSNLQNVTVKANTERSWDFNIG 135
            LRPG   P NV LVR+++I +P TI AL  IF RFG V KIV FDKGSG+QAL+Q + V  A  A +A DMQ+MY+ CN IRVG+SNL  +TVK NT+RSWDF  G
Sbjct:   27 LRPGGNVPSNVCLVRISNIFYPPTIDALHTIFRRFGNVIKIVCFDKGSGYQALIQYDSVEAATQAFQAVDMQDMYTNCNTIRVGFSNLTEITVKNNTDRSWDFTTG 132          
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: A0A4D9D0W9_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0W9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.340e-25
Identity = 69/144 (47.92%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   30 LRPGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADMQEMYSGCNLIRVGYSNLQNVTVKANTERSWDFNIGPPLEGAFPPGTTSPSPHRIGSAGISSASPSATSHITKP 173
            LRPG  +P NV+L R+TD + PVT+ AL  +FS +G V KIVMF+KG+G QALVQ  DV +A  A+E AD + MY+  NLIRVGYS   ++ V+ANT+R+WD+      EG+ P G    +P    S+  SSA+PS    +  P
Sbjct:  273 LRPGTSEPSNVILARITDGLFPVTLDALYTLFSFYGPVQKIVMFNKGAGNQALVQYPDVASAQAAYEQADHRNMYTDSNLIRVGYSTHHDIKVRANTDRTWDYTKKKTSEGSAPAGPADTTP----SSATSSATPSGPPAVVGP 412          
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: A0A7J6SYV6_PEROL (Uncharacterized protein n=2 Tax=Perkinsus TaxID=28000 RepID=A0A7J6SYV6_PEROL)

HSP 1 Score: 102 bits (254), Expect = 3.890e-19
Identity = 48/116 (41.38%), Postives = 75/116 (64.66%), Query Frame = 0
Query:   32 PGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADMQEMYSGCNLIRVGYSNLQNVTVKANTERSWDFNIGPPLEGAFPPGTT 147
            P    P  +LL  +T++V+PVT+  + Q+ ++FG + K+++F++G+  QALVQ+ DV TA  A E  D Q +Y+GCN I+V YS+L  + +K N ERSWDF     L G+   G++
Sbjct:  146 PDSNPPNRILLFTITNLVYPVTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADVETANIAKEQLDGQNIYAGCNTIKVQYSSLPQLEIKHNNERSWDFTNPNLLSGSVGGGSS 261          
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: I2CQY0_NANGC (Polypyrimidine tract binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQY0_NANGC)

HSP 1 Score: 99.4 bits (246), Expect = 1.050e-18
Identity = 76/214 (35.51%), Postives = 109/214 (50.93%), Query Frame = 0
Query:  989 WAAAAPAERSPILMVLHVDAHEVSPAAICQLFGLYGDVMKVKLVSSRGMALVQMRYAVQAMNAQRLLDQTPLCGMVLEVKASSQWTINDPTATDFGACGEVHRYKTVPSPEDSRYRDGLSPPCPTLVIDNVSPDVSAEEITSIFVKHGVVSSVDLDTRPDAPVVQGNAAEPKPSVQALVHMEADGRIGATEAAMHALIMTHNLELRARRLRVSF 1202
            W+A  P   + +L+V  ++   V   A+  LFGLYGDV +VK++  +  A+V+M   VQA  A+ LLD +PL G V++VK+S+Q TI D  A DF A   +H Y+   SP    Y   L  P   L I N+  D S     S+  +   V  V   TR    ++  +   P     ALV  +      + EAA+HA I+ HN E+  R L V+F
Sbjct:  123 WSARLPGTDTCVLIVQGLNMEMVGAEALAALFGLYGDVRRVKMMPEQDSAIVEMERPVQAYVAKWLLDASPLGGRVIKVKSSTQDTIRDVQAQDFTAF-PLHGYRQYASPRHPSYLANLVEPTAVLRIANIDWDTSEITFRSLLTQQEGVMGV---TR----LLPSSHTSP-----ALVSFQ------SVEAAVHACILLHNQEVDGRLLYVTF 317          
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: C5L0S5_PERM5 (Polypyrimidine tract binding protein, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L0S5_PERM5)

HSP 1 Score: 102 bits (255), Expect = 1.280e-18
Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 0
Query:   32 PGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADMQEMYSGCNLIRVGYSNLQNVTVKANTERSWDFNIGPPLEGAFPPGT 146
            P    P  +LL  +T++V+PVT+  + Q+ ++FG + K+++F++G+  QALVQ+ DV TA  A E  D Q +Y+GCN I+V YS+L  + VK N ERSWDF     L G    G+
Sbjct:  142 PDSNPPNRILLFTITNLVYPVTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADVDTANVAKEQLDGQNIYAGCNTIKVQYSSLPQLEVKHNNERSWDFTNPSLLPGGMEAGS 256          
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: A0A7J6LFE9_PEROL (Uncharacterized protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LFE9_PEROL)

HSP 1 Score: 102 bits (254), Expect = 1.410e-18
Identity = 48/116 (41.38%), Postives = 75/116 (64.66%), Query Frame = 0
Query:   32 PGQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADMQEMYSGCNLIRVGYSNLQNVTVKANTERSWDFNIGPPLEGAFPPGTT 147
            P    P  +LL  +T++V+PVT+  + Q+ ++FG + K+++F++G+  QALVQ+ DV TA  A E  D Q +Y+GCN I+V YS+L  + +K N ERSWDF     L G+   G++
Sbjct:  146 PDSNPPNRILLFTITNLVYPVTVDVISQVMNKFGGLEKVIVFNRGNAVQALVQLADVETANIAKEQLDGQNIYAGCNTIKVQYSSLPQLEIKHNNERSWDFTNPNLLSGSVGGGSS 261          
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Match: L8HLM4_ACACA (HnRNPL/PTB/hephaestus splicing factor subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HLM4_ACACA)

HSP 1 Score: 102 bits (253), Expect = 1.760e-18
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:   33 GQEQPGNVLLVRVTDIVHPVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADMQEMYSGCNLIRVGYSNLQNVTVKANTERSWDF 132
            G EQ  ++LLV VT++V+PVTI  L Q+FS++G ++KIV+F K  GFQAL+QM D + A  A +A D Q +YSGC  +R+ YSNL ++ VK N ++S DF
Sbjct:  200 GDEQSNHILLVTVTNLVYPVTIDILHQVFSKYGAIHKIVIFSK-KGFQALIQMGDKNQAQAAKQALDGQNIYSGCCTLRIQYSNLPSLNVKYNNDKSRDF 298          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig735.15322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ42_9PHAE2.920e-17446.25RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FN53_ECTSI6.860e-10236.35PTB (HnRNP) homolog family member (Ptb-1) n=1 Tax=... [more]
A0A7S2XYL8_9STRA1.930e-3360.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3UWL0_HETAK2.120e-2860.38Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A4D9D0W9_9STRA1.340e-2547.92RRM domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7J6SYV6_PEROL3.890e-1941.38Uncharacterized protein n=2 Tax=Perkinsus TaxID=28... [more]
I2CQY0_NANGC1.050e-1835.51Polypyrimidine tract binding protein n=1 Tax=Nanno... [more]
C5L0S5_PERM51.280e-1842.61Polypyrimidine tract binding protein, putative n=1... [more]
A0A7J6LFE9_PEROL1.410e-1841.38Uncharacterized protein n=5 Tax=Perkinsus olseni T... [more]
L8HLM4_ACACA1.760e-1851.00HnRNPL/PTB/hephaestus splicing factor subfamily pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 42..113
e-value: 0.68
score: 8.0
coord: 1113..1201
e-value: 0.11
score: 15.1
coord: 1000..1068
e-value: 3.6E-5
score: 33.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 999..1072
score: 9.473
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1102..1204
e-value: 2.8E-9
score: 38.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 993..1096
e-value: 2.4E-11
score: 45.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 38..137
e-value: 2.0E-23
score: 84.4
IPR021790PTBP1, RNA recognition motif 2-likePFAMPF11835RRM_8coord: 38..114
e-value: 6.0E-7
score: 29.6
NoneNo IPR availablePFAMPF13893RRM_5coord: 987..1076
e-value: 3.0E-12
score: 46.2
NoneNo IPR availablePANTHERPTHR15592:SF27HEPHAESTUS, ISOFORM Ycoord: 27..208
coord: 993..1202
NoneNo IPR availablePANTHERPTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDcoord: 993..1202
coord: 27..208
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 34..130
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 1010..1147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig735contigH-paniculata_contig735:18492..31568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig735.15322.1mRNA_H-paniculata_contig735.15322.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig735 18444..32714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig735.15322.1 ID=prot_H-paniculata_contig735.15322.1|Name=mRNA_H-paniculata_contig735.15322.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1212bp
MNPNKRPPPSSSSGAFEGGDGLIHRDAKILRPGQEQPGNVLLVRVTDIVH
PVTILALQQIFSRFGKVNKIVMFDKGSGFQALVQMNDVHTAMNAHEAADM
QEMYSGCNLIRVGYSNLQNVTVKANTERSWDFNIGPPLEGAFPPGTTSPS
PHRIGSAGISSASPSATSHITKPLNSSSPHHATAPPQQQGYSSQQQYSPY
SAVQQHKQQSPYASAYTPPQQQYGTNPQSGYPPPPQQQQTPYNNGTAAAA
YGAGAGNVVAAASAAAAVSASGSYAPPASSYGQQSYHAPYGHGPPPPYAQ
QSYNPSPQQPYGQQSYPHMTPPHGGGGGAGGGDDGGNSSSGGAAGRGMPS
GGGASGAGSSVSGVGVGSYNSRPALPPQSPQQQPPGGGGGGGYYPPSPNM
MSPQQGGPYGSIPYSSDRGPGGYGSIGGGGMGMGRPNFSGRQGQGGGGGG
LGAGGPGGGGGAGQGGRGGGGYGGGGGGGGGGLLQAPLNHRHLASAAHDN
GYGHANRPPMRYRLQDKKSSGGAAGGATKPRLRMPLLDPKHIQALTLMAT
TAVAAKKSARRGSLEVEGEAQEPSGGGSRRRSSRTGGMMMHFVREKNGKD
GGSSTEAALGEQKEDGGGGSSTGQKRANKREAAEMLGPNAAADQLAAATA
KVRVSDSHAPSGGADGSGEAAVVDRESKRVNKREAAEMLGADEADQLAAA
TAKVRVSDDTEEEVAEESKRAQGEIKDGKNGDQTSKVMEETVVGNEAASV
VAGEDATGVSVASGEGKQGSENKKRNLSTRGVGGGQRGNDVREEGICNIL
RRGREGGGDAGASGNERGAVKKGSEKAVSTGASKEGGNEEAVNGAETVDT
QDSASPSAAGGDTGGQMGEGEGGRNAVASSRGGSSRSERWGQKAQAVGER
RPATTAGTAVPPPLNGSPKSDGISPSLAIIDTTVTGTAKISRRQSEEADG
EEVEEAEGEGEVKIERQDDDDDGVGDGAESEEVVDVGAWAAAAPAERSPI
LMVLHVDAHEVSPAAICQLFGLYGDVMKVKLVSSRGMALVQMRYAVQAMN
AQRLLDQTPLCGMVLEVKASSQWTINDPTATDFGACGEVHRYKTVPSPED
SRYRDGLSPPCPTLVIDNVSPDVSAEEITSIFVKHGVVSSVDLDTRPDAP
VVQGNAAEPKPSVQALVHMEADGRIGATEAAMHALIMTHNLELRARRLRV
SFLSGDRHVEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR021790PTBP1_RRM
IPR035979RBD_domain_sf