prot_H-paniculata_contig73402.15310.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig73402.15310.1
Unique Nameprot_H-paniculata_contig73402.15310.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length173
Homology
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: D0IPZ5_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=74 Tax=Phaeophyceae TaxID=2870 RepID=D0IPZ5_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 1.040e-105
Identity = 156/172 (90.70%), Postives = 166/172 (96.51%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLVWAEAWM 172
            MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGL HTMP+FIIIFLFFTMANLGLPGTSSF+GEFLLLVSAFEANST+CFFAATSMILGGGYSLWLFNRIAYGNIK+VG DLSFREF+IF PLVLGT+FMGIYPN+FFS MHA+VSNLVW + W+
Sbjct:  311 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLTHTMPIFIIIFLFFTMANLGLPGTSSFIGEFLLLVSAFEANSTACFFAATSMILGGGYSLWLFNRIAYGNIKMVGLDLSFREFMIFLPLVLGTLFMGIYPNLFFSAMHATVSNLVWVDLWL 482          
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: E6ZET0_ECTSI (NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=Ectocarpales TaxID=2877 RepID=E6ZET0_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 5.910e-105
Identity = 153/172 (88.95%), Postives = 165/172 (95.93%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLVWAEAWM 172
            MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGL HTMP+FIIIFLFFTMANLGLPGTSSF+GEFLLLVSAFEAN+T+CFFAATSMILGGGYSLWLFNRIAYGN+K+VG DLS REF++F PLV+GT+FMGIYPN+FFS MHA+VSNLVWA  WM
Sbjct:  311 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLTHTMPIFIIIFLFFTMANLGLPGTSSFIGEFLLLVSAFEANTTACFFAATSMILGGGYSLWLFNRIAYGNVKLVGFDLSLREFILFLPLVIGTLFMGIYPNVFFSAMHAAVSNLVWANLWM 482          
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: Q8LWY6_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Laminariales TaxID=2886 RepID=Q8LWY6_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 1.220e-104
Identity = 153/172 (88.95%), Postives = 165/172 (95.93%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLVWAEAWM 172
            MIGLFTGTVIGVEAAILQ LSHGFVSSALFLIIGVLYDRWHSRVVKYYGGL HTMP+FIIIFLFFTMANLGLPGTSSF+GEFLLLVSAFEANST+CFFAATSMILGGGYSLWLFNRIAYGNIK++G DLSFREF++F PLVLGT+FMGIYPN+FFS MHA+VSNLVW + W+
Sbjct:  312 MIGLFTGTVIGVEAAILQRLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLTHTMPIFIIIFLFFTMANLGLPGTSSFIGEFLLLVSAFEANSTACFFAATSMILGGGYSLWLFNRIAYGNIKMIGFDLSFREFMVFLPLVLGTLFMGIYPNLFFSAMHATVSNLVWVDLWL 483          
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: A0A1I9LW78_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW78_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 4.770e-104
Identity = 154/172 (89.53%), Postives = 165/172 (95.93%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLVWAEAWM 172
            +IGLFTGTVIG+EAAILQSLSHGFVSSALFLIIGVLYDR+HSRV+KYYGGL HTMP+FIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEAN+TSCFFAATSMILGGGYSLWLFNRIAYGNIK+   DLS REFV+FFPLVLGT+FMGIYPNIFFS+MHASVSNLVW + WM
Sbjct:  311 IIGLFTGTVIGIEAAILQSLSHGFVSSALFLIIGVLYDRFHSRVIKYYGGLTHTMPIFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANTTSCFFAATSMILGGGYSLWLFNRIAYGNIKVASFDLSLREFVVFFPLVLGTLFMGIYPNIFFSIMHASVSNLVWLDLWM 482          
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: A0A2R4QQ88_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QQ88_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 1.240e-101
Identity = 152/172 (88.37%), Postives = 163/172 (94.77%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLVWAEAWM 172
            MIGLFTGTVIG+EAAILQSLSHGFVSSALFLIIGVLYDRWH+R VKYYGGL HTMP+FIIIFLFFTMANLGLPGTSSFVGEFLL VSAFEAN+TSCFFAATSMILGG YSLWLFNRIAYGNIK+VGSDLS+REFV+FFPLVLGT+ MGIYP+IFF  MHASVSNLVW + W+
Sbjct:  311 MIGLFTGTVIGIEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVKYYGGLTHTMPIFIIIFLFFTMANLGLPGTSSFVGEFLLFVSAFEANTTSCFFAATSMILGGVYSLWLFNRIAYGNIKLVGSDLSYREFVVFFPLVLGTLVMGIYPDIFFCPMHASVSNLVWIDLWI 482          
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: A0A0U1WNP0_SARFS (NADH-ubiquinone oxidoreductase chain 4 n=23 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNP0_SARFS)

HSP 1 Score: 301 bits (771), Expect = 1.830e-98
Identity = 144/172 (83.72%), Postives = 162/172 (94.19%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLVWAEAWM 172
            M+GLF+GTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWH+R V YYGGL HTMP+FIIIFLFFTMANLGLPGTSSFVGEFLLLVSAF+AN+T+CFFA+TSMI GG YSLWLFNRIAYGNIK++G DL++REFVIF PL++GT+FMG+YPNIFFS MHASVSNLVW + W+
Sbjct:  311 MVGLFSGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHTRGVNYYGGLTHTMPIFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFDANTTACFFASTSMIFGGVYSLWLFNRIAYGNIKLIGCDLNYREFVIFVPLLVGTVFMGLYPNIFFSAMHASVSNLVWIDRWV 482          
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: A0A8F0K293_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K293_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 8.670e-94
Identity = 141/171 (82.46%), Postives = 154/171 (90.06%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLVWAEAW 171
            +IGLFTGTVIG+EAAI+QSLSHGFVSSALFL IGVLYDRWHSRVV YYGGL HTMP+FIIIFLFFTMANLGLPGTSSFVGEFLLL SAFEAN+T+CFFAA SMILGG YSLW FNRIAYGN K+ G DLS REF++F PLVLGT F+G+YP IFFS MHA+VSNLVW + W
Sbjct:  311 VIGLFTGTVIGIEAAIVQSLSHGFVSSALFLSIGVLYDRWHSRVVTYYGGLTHTMPIFIIIFLFFTMANLGLPGTSSFVGEFLLLASAFEANTTACFFAAISMILGGAYSLWAFNRIAYGNAKLSGLDLSSREFMVFLPLVLGTFFVGLYPKIFFSPMHATVSNLVWVDYW 481          
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: A0A4Y5T8F5_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8F5_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 3.100e-93
Identity = 138/167 (82.63%), Postives = 154/167 (92.22%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLVW 167
            +IGLFTGTVIGVEAA+LQSLSHGFVSSALFLIIGVLYDRWHSRV+KYYGGL HTMPLFI IFLFFTMANLGLPGTSSFVGEFLLL+SAF AN+T+CF AATS++LGG YSLWLFNRIAYGNIK+ G D++ REFV+F PLV+GT+ MGIYPN+F   MHA+VSNLVW
Sbjct:  311 VIGLFTGTVIGVEAALLQSLSHGFVSSALFLIIGVLYDRWHSRVIKYYGGLVHTMPLFISIFLFFTMANLGLPGTSSFVGEFLLLISAFSANTTACFLAATSLVLGGAYSLWLFNRIAYGNIKLAGLDITLREFVVFLPLVIGTLVMGIYPNLFLQPMHAAVSNLVW 477          
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: Q2TUA4_DICDH (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA4_DICDH)

HSP 1 Score: 284 bits (726), Expect = 1.050e-91
Identity = 134/166 (80.72%), Postives = 155/166 (93.37%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLV 166
            +IGLFTG+++GVEAA+LQSLSHGFVSSALFLIIGVLYDRWHSRVVKYY GL H+MP+FII+FLFFTMANLGLPGTSSFVGEFLLL+SAFEANST+CFFAATSM+LGG YSLWLFNR+AYGN K++G D+S REFV+F PL+LGT+ MGIYPN+F   MHA+VSN+V
Sbjct:  311 VIGLFTGSILGVEAALLQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYSGLVHSMPVFIIVFLFFTMANLGLPGTSSFVGEFLLLLSAFEANSTACFFAATSMVLGGAYSLWLFNRVAYGNAKLIGLDISLREFVLFLPLILGTLIMGIYPNVFLQPMHAAVSNIV 476          
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Match: A0A8F0K094_9PHAE (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K094_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 4.300e-85
Identity = 129/167 (77.25%), Postives = 148/167 (88.62%), Query Frame = 0
Query:    1 MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGGLAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAATSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIYPNIFFSVMHASVSNLVW 167
            +IGLFTGT IGVEAA+ QSLSHGFVSSALFLIIG+LYDRWHSR++ YYGGL +TMPLFII+FLFFT+ANLGLP TSSFVGEFLLLVS F++N+T  FF+ATSMIL G Y+LWLFNR+AYGNIK  G DL+ REF+I  PLVLGT+ MG+YPNIFF  MHA+VSNLVW
Sbjct:  311 IIGLFTGTAIGVEAALFQSLSHGFVSSALFLIIGILYDRWHSRIISYYGGLVYTMPLFIILFLFFTLANLGLPCTSSFVGEFLLLVSIFDSNTTVGFFSATSMILSGAYALWLFNRVAYGNIKTSGVDLTLREFIILLPLVLGTLTMGLYPNIFFEPMHATVSNLVW 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig73402.15310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D0IPZ5_9PHAE1.040e-10590.70NADH-ubiquinone oxidoreductase chain 4 n=74 Tax=Ph... [more]
E6ZET0_ECTSI5.910e-10588.95NADH-ubiquinone oxidoreductase chain 4 n=10 Tax=Ec... [more]
Q8LWY6_9PHAE1.220e-10488.95NADH-ubiquinone oxidoreductase chain 4 n=5 Tax=Lam... [more]
A0A1I9LW78_9PHAE4.770e-10489.53NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Ple... [more]
A0A2R4QQ88_9PHAE1.240e-10188.37NADH-ubiquinone oxidoreductase chain 4 n=4 Tax=Fuc... [more]
A0A0U1WNP0_SARFS1.830e-9883.72NADH-ubiquinone oxidoreductase chain 4 n=23 Tax=Sa... [more]
A0A8F0K293_9PHAE8.670e-9482.46NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Ana... [more]
A0A4Y5T8F5_9PHAE3.100e-9382.63NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dic... [more]
Q2TUA4_DICDH1.050e-9180.72NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Dic... [more]
A0A8F0K094_9PHAE4.300e-8577.25NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Pro... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003918NADH:ubiquinone oxidoreductasePRINTSPR01437NUOXDRDTASE4coord: 11..30
score: 44.3
coord: 63..89
score: 38.11
IPR003918NADH:ubiquinone oxidoreductasePANTHERPTHR43507FAMILY NOT NAMEDcoord: 1..166
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitPFAMPF00361Proton_antipo_Mcoord: 1..103
e-value: 3.5E-20
score: 72.4
NoneNo IPR availablePANTHERPTHR43507:SF1NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4coord: 1..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..133
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 156..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..40
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig73402contigH-paniculata_contig73402:51..569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig73402.15310.1mRNA_H-paniculata_contig73402.15310.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig73402 51..569 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig73402.15310.1 ID=prot_H-paniculata_contig73402.15310.1|Name=mRNA_H-paniculata_contig73402.15310.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MIGLFTGTVIGVEAAILQSLSHGFVSSALFLIIGVLYDRWHSRVVKYYGG
LAHTMPLFIIIFLFFTMANLGLPGTSSFVGEFLLLVSAFEANSTSCFFAA
TSMILGGGYSLWLFNRIAYGNIKIVGSDLSFREFVIFFPLVLGTIFMGIY
PNIFFSVMHASVSNLVWAEAWM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003918NADH_UbQ_OxRdtase
IPR001750ND/Mrp_mem