prot_H-paniculata_contig7310.15281.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7310.15281.1
Unique Nameprot_H-paniculata_contig7310.15281.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: A0A6H5KU54_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU54_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 6.440e-38
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGRTL 70
            LYTWGSGYHGQLALGTRQVQ TPA+VAK LSTQQ LR+VWCGSHHCAAVT DGE+Y+WGSN+TGCLGR L
Sbjct:  304 LYTWGSGYHGQLALGTRQVQPTPAIVAKLLSTQQLLRKVWCGSHHCAAVTTDGELYTWGSNRTGCLGRAL 373          
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: D7G5T7_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T7_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 3.740e-36
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGRTL 70
            LYTWGSGYHGQLALGTRQVQ TPA+VAK L+TQQ LR+VWCGSHHCAAVT DGE+Y+WGSN+TGCLGR L
Sbjct:  387 LYTWGSGYHGQLALGTRQVQPTPAIVAKLLATQQLLRKVWCGSHHCAAVTTDGELYTWGSNRTGCLGRAL 456          
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: A0A835YMU1_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU1_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.870e-25
Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGRTL 70
            LYTWGSGYHGQL LG RQV   P +V + L TQQ+++ V CGSHH   VT +GE+YSWGSNK GCLGRTL
Sbjct:  385 LYTWGSGYHGQLGLGHRQVVLRPTLVQELLKTQQWVKFVACGSHHNVVVTAEGELYSWGSNKHGCLGRTL 454          
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: A0A7S3GUK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUK4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.970e-22
Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALG-TRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGRTL 70
            LYTWGSGYHGQLA G ++ V   PAVV  FL     +++V  GSHHC A+T D E+YSWGSN  GCLGR +
Sbjct:   12 LYTWGSGYHGQLAQGHSKVVSLIPAVVEYFLGVHLLVKQVAAGSHHCLAITQDCELYSWGSNNNGCLGRKI 82          
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: A0A7S2KKF3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KKF3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 5.220e-18
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGR 68
            ++TWGSG+ GQL  G   + A P +VA F S    ++ V CGSHH A +T DG++Y+WGSN  GCLGR
Sbjct:   18 VFTWGSGFQGQLGQGKTTMSAKPKLVAYFRSMHILIKEVVCGSHHNAVITSDGKLYTWGSNINGCLGR 85          
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: A0A8J2SXS7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXS7_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.070e-17
Identity = 38/70 (54.29%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGRTL 70
            +YTWGSGYHGQLA G  QVQ TP VV    S       +  GSHH A + +DGE+Y+WGSN  GCLG  +
Sbjct:  384 VYTWGSGYHGQLAHGRTQVQTTPTVVEALRSRNLSAVSIRLGSHHSAMIAMDGELYTWGSNLHGCLGHAI 453          
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: A0A482SX37_9ARCH (SAP domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SX37_9ARCH)

HSP 1 Score: 84.7 bits (208), Expect = 1.270e-17
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGR 68
            LY+WGSGY GQL LG + V   P ++  FL     +R +  G+ HC AVT+DGE+YSWGSN+ G LGR
Sbjct:  381 LYSWGSGYQGQLGLGAKSVSLEPMIIEYFLCVNTMIRMIAAGATHCLAVTVDGEVYSWGSNQHGQLGR 448          
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: A0A7S2CTI0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTI0_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.730e-17
Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGRTL 70
            ++TWGSGYHGQL  G  Q+   P  V++  S   Y + + CGSHH A ++ DGE+++WGSN   CLGR +
Sbjct:   28 VWTWGSGYHGQLGQGNTQMSLKPGRVSEISSWHVYAKSIQCGSHHNAMISHDGELWTWGSNMNNCLGREI 97          
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: A0A024U1X2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1X2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.030e-17
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGR 68
            +Y+WG+G +GQLALG  QV  TP ++  FL+   Y++RV  G +H AA+++D E+Y+WGSN  GCLGR
Sbjct:  489 VYSWGTGRYGQLALGGNQVVPTPTLIQDFLTQCVYIKRVCAGMYHNAALSVDDEVYTWGSNVNGCLGR 556          
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Match: A0A7S3Y3U7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3U7_HETAK)

HSP 1 Score: 82.0 bits (201), Expect = 7.240e-17
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVTIDGEMYSWGSNKTGCLGRTL 70
            +YTWGSGYHGQLA    QV   PA V  FL     +R + CG++HCAA+TI+ E+Y+WGSN  G LGR +
Sbjct:  122 VYTWGSGYHGQLAQLDIQVALEPAPVEYFLDFHLPVRLIACGTYHCAALTIEKELYTWGSNMHGSLGRLV 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7310.15281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU54_9PHAE6.440e-3885.71SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G5T7_ECTSI3.740e-3684.29SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YMU1_9STRA6.870e-2567.14Regulator of chromosome condensation 1/beta-lactam... [more]
A0A7S3GUK4_9STRA2.970e-2259.15Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2KKF3_9STRA5.220e-1851.47Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8J2SXS7_9STRA1.070e-1754.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A482SX37_9ARCH1.270e-1752.94SAP domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A7S2CTI0_9STRA3.730e-1747.14Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A024U1X2_9STRA7.030e-1751.47Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S3Y3U7_HETAK7.240e-1754.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..69
e-value: 1.5E-18
score: 68.7
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 1..67
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 1..49
e-value: 8.8E-9
score: 35.9
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 1..52
score: 13.177
NoneNo IPR availablePANTHERPTHR22870:SF330E3 UBIQUITIN-PROTEIN LIGASE HERC2coord: 1..68
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 1..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7310contigH-paniculata_contig7310:656..865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7310.15281.1mRNA_H-paniculata_contig7310.15281.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7310 656..865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7310.15281.1 ID=prot_H-paniculata_contig7310.15281.1|Name=mRNA_H-paniculata_contig7310.15281.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
LYTWGSGYHGQLALGTRQVQATPAVVAKFLSTQQYLRRVWCGSHHCAAVT
IDGEMYSWGSNKTGCLGRTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens