prot_H-paniculata_contig7272.15246.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7272.15246.1
Unique Nameprot_H-paniculata_contig7272.15246.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
[Close]
BLAST of mRNA_H-paniculata_contig7272.15246.1 vs. uniprot
Match: D8LCJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ3_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 8.450e-6
Identity = 20/37 (54.05%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:    3 LEAGADAIDFTLHDLDGQAWRLSAAMEK-GLPVILIW 38
            L  G DA+DFTLHDL+G+ W L   +E+ GLPV+++W
Sbjct:  166 LTVGEDAVDFTLHDLEGRRWNLGETLERTGLPVVMVW 202
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7272.15246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCJ3_ECTSI8.450e-654.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7272contigH-paniculata_contig7272:651..854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7272.15246.1mRNA_H-paniculata_contig7272.15246.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7272 488..868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7272.15246.1 ID=prot_H-paniculata_contig7272.15246.1|Name=mRNA_H-paniculata_contig7272.15246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
MLLEAGADAIDFTLHDLDGQAWRLSAAMEKGLPVILIWACSHVPFIRDRA
HIMLLGKKVHTGMSMIC*
back to top