prot_H-paniculata_contig726.15234.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig726.15234.1
Unique Nameprot_H-paniculata_contig726.15234.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: D7G768_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G768_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 7.030e-49
Identity = 88/135 (65.19%), Postives = 105/135 (77.78%), Query Frame = 0
Query:    3 AVTKHGFSLASGALACLASVLGKVAFDGNTSFHRIARQCCEHHIGGSAACSAVSLAVQAASLAGMVLVNALMLSTYLRALQQSGSTIATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLIAGGNS 137
            A+  HG+S+ASGALAC ASVLGKVAFDG+T F   A   CE H    A C+ V   VQ ASLAGM +VNA+MLST+L+ALQ SGST+ATVTN +TNFVLSG+SGR++FGERLP LWF GA+ VV GV L+ GG+S
Sbjct:   12 AIENHGYSVASGALACFASVLGKVAFDGDTPFQVQATSACEEHFPELALCNTVGRLVQGASLAGMFMVNAVMLSTFLKALQMSGSTVATVTNFSTNFVLSGISGRMVFGERLPALWFFGASLVVSGVVLLTGGSS 146          
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: K0TND9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TND9_THAOC)

HSP 1 Score: 67.0 bits (162), Expect = 3.210e-11
Identity = 45/126 (35.71%), Postives = 71/126 (56.35%), Query Frame = 0
Query:   10 SLASGALACLASVLGKVAFDGNTSFHR-IARQCCEH-HIGGSAACSAVSLAVQAASLAGMVLVNALMLSTYLRALQQSGSTIATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLIA 133
            ++ SGAL   AS +GK+AF  ++     +  QC  H     S  C  ++L  +   L  M+  NA+M+S+++  +  SGS + T  + A+NF LS V G I F ER+  LW  GAA +V+G+ L++
Sbjct:    4 AVVSGALGATASFIGKLAFASDSPVQSWVYNQCSSHAEYINSWICPKLALVSRGICLLLMIGTNAIMISSFVEGMGDSGSVVGTALSTASNFTLSAVFGIIFFDERVTTLWCFGAALLVIGMWLLS 129          
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: UPI00026599A2 (uncharacterized protein LOC100905534 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026599A2)

HSP 1 Score: 65.5 bits (158), Expect = 2.120e-10
Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 0
Query:    9 FSLASGALACLASVLGKVAFDGNTSFHRIARQCCE--------HHIGGSAACSAVSLAVQAASLAGMVLVNALMLSTYLRALQQSGSTI-ATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLIAGGNSNSNAGEGRIKQ 148
            FSL SG LA L+SVLGK+    +    R A  C            I     C ++   V+   L  M+  NALM + + +AL+ S ST+  TV N A NF  S + G+  FGERL  +W  G+  +++G+ LI  G S  N   G++ Q
Sbjct:    8 FSLLSGFLASLSSVLGKLGMASD----RAAAMCQTVLSAWFETTQIEAFYLCESILSLVRGGFLLSMIACNALMWTIFTKALRSSSSTVEVTVVNLAANFFCSAIFGQSFFGERLTLVWALGSVIIIIGLALIHVG-SKRNVESGKLSQ 151          
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: UPI0020096D80 (uncharacterized protein LOC125219862 n=3 Tax=Salvia TaxID=21880 RepID=UPI0020096D80)

HSP 1 Score: 63.9 bits (154), Expect = 2.340e-10
Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   67 MVLVNALMLSTYLRALQQSGSTIATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLIA 133
            +VL N +M   Y+ +++   +  ATVTN ATNF+ SG+SG ILF E LP  WF GAA +V+GV +++
Sbjct:   38 VVLFNVIMWGCYVNSMKSLSALQATVTNFATNFLTSGMSGYILFDEALPPKWFAGAALIVIGVVVLS 104          
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: A0A022RIX1_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RIX1_ERYGU)

HSP 1 Score: 60.5 bits (145), Expect = 5.040e-9
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   67 MVLVNALMLSTYLRALQQSGSTIATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLIA 133
            +V  N +M   Y+ +++   S  ATVTN ATNF+ SG+SG  LF E LP  WF GAA +V+GV +++
Sbjct:   38 VVFFNVVMWGCYVNSMKSLSSLQATVTNFATNFLSSGLSGLFLFEEALPVKWFAGAALIVIGVVVLS 104          
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: A0A5A7RIP2_STRAF (Cell growth defect factor 2 n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7RIP2_STRAF)

HSP 1 Score: 58.2 bits (139), Expect = 3.870e-8
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   67 MVLVNALMLSTYLRALQQSGSTIATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLIA 133
            ++  N +M   Y+ +++   S  ATVTN ATNF+ SG+SG  LF E LP  WF GA  +V+GV +++
Sbjct:   38 VIFFNVIMWGCYVNSMRSLSSLQATVTNFATNFLSSGLSGFFLFEEALPLKWFAGAVLIVIGVIILS 104          
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: A0A2P6NUJ1_9EUKA (EamA domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUJ1_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 8.360e-8
Identity = 27/75 (36.00%), Postives = 51/75 (68.00%), Query Frame = 0
Query:   59 VQAASLAGMVLVNALMLSTYLRALQQSGSTIATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLIA 133
            ++AA    M+L NALML+ + +A+  + +  ATV + + N+  + + G ++F E+LP +W+ GAAC++ GV+L++
Sbjct:   67 IRAACFGLMLLTNALMLNFFTKAMDLTTTANATVISSSMNYFFTAIFGIVVFQEKLPWMWYIGAACILAGVSLVS 141          
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: A0A7R9VE96_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VE96_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 1.170e-7
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   67 MVLVNALMLSTYLRALQQSGSTIATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLI 132
            M+  NA M   +LR+++   S  AT  + A+N ++SGV GR++FGE LP  W  G+ C++LGV  +
Sbjct:   60 MLACNAAMSVLFLRSMRGLPSLQATTASLASNILMSGVFGRVVFGEELPSAWLLGSGCIILGVACV 125          
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: UPI00083C57F3 (transmembrane protein 42 n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C57F3)

HSP 1 Score: 57.0 bits (136), Expect = 1.330e-7
Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   67 MVLVNALMLSTYLRALQQSGSTI-ATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLI 132
            M+  NA + + Y++ALQ S S++ ATVT+ ATN++LS +SG ++FGE    +W+ GA  V+LG+ LI
Sbjct:   43 MLACNAAVWTFYVKALQASNSSLSATVTSAATNYLLSAISGFLIFGEVTSLIWWAGAGLVLLGLILI 109          
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Match: A0A3P8P6U9_ASTCA (Transmembrane protein 42a n=8 Tax=Pseudocrenilabrinae TaxID=318546 RepID=A0A3P8P6U9_ASTCA)

HSP 1 Score: 57.0 bits (136), Expect = 2.090e-7
Identity = 44/134 (32.84%), Postives = 72/134 (53.73%), Query Frame = 0
Query:    9 FSLASGALACLASVLGKVAFDGNTSFHRIARQCCEHHI-------GGSAACSAVSLAVQAASLAGMVLVNALMLSTYLRALQQSGSTI-ATVTNCATNFVLSGVSGRILFGERLPGLWFCGAACVVLGVTLIAG 134
            ++L +G LA  AS+  K++   +       R+ CE  +       GGSAAC  + + ++      +   NA+M +T+ +AL+ S ST  ATV   A+NF+ SG+ GR+ FGE    LW+ G A  + G+ ++ G
Sbjct:    7 YALLAGFLAATASLSAKLSLGAS-----YLREMCETRLSDWNQTPGGSAACDWLHIPLRLLCGGLLFACNAVMWTTFSKALRHSTSTARATVKTTASNFISSGLLGRLFFGESHATLWWAGIALTLCGLLMLHG 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig726.15234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G768_ECTSI7.030e-4965.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K0TND9_THAOC3.210e-1135.71Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
UPI00026599A22.120e-1035.57uncharacterized protein LOC100905534 n=1 Tax=Galen... [more]
UPI0020096D802.340e-1047.76uncharacterized protein LOC125219862 n=3 Tax=Salvi... [more]
A0A022RIX1_ERYGU5.040e-946.27Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
A0A5A7RIP2_STRAF3.870e-843.28Cell growth defect factor 2 n=1 Tax=Striga asiatic... [more]
A0A2P6NUJ1_9EUKA8.360e-836.00EamA domain-containing protein n=1 Tax=Planoprotos... [more]
A0A7R9VE96_9CHLO1.170e-740.91Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
UPI00083C57F31.330e-746.27transmembrane protein 42 n=1 Tax=Nicrophorus vespi... [more]
A0A3P8P6U9_ASTCA2.090e-732.84Transmembrane protein 42a n=8 Tax=Pseudocrenilabri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039632Transmembrane protein 42PANTHERPTHR31965FAMILY NOT NAMEDcoord: 7..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..149
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..110
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..90
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..135
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..115
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.546
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 60..136
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 7..24
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 92..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig726contigH-paniculata_contig726:11321..13356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig726.15234.1mRNA_H-paniculata_contig726.15234.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig726 11084..13826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig726.15234.1 ID=prot_H-paniculata_contig726.15234.1|Name=mRNA_H-paniculata_contig726.15234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
MSAVTKHGFSLASGALACLASVLGKVAFDGNTSFHRIARQCCEHHIGGSA
ACSAVSLAVQAASLAGMVLVNALMLSTYLRALQQSGSTIATVTNCATNFV
LSGVSGRILFGERLPGLWFCGAACVVLGVTLIAGGNSNSNAGEGRIKQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039632TMEM42