prot_H-paniculata_contig7256.15230.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: A0A7M5XDS1_9CNID (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XDS1_9CNID) HSP 1 Score: 83.6 bits (205), Expect = 6.550e-17 Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVEGKVKISAPGNSERSSNSSEYRGMVGSLMYASTGTRPNTAYAV 94
M D G ++ +LG++VRR+R G I I Q Y+R VL+R G DECR + TP+E E+ N Y+ +GSL+YAS GTRP+ +Y+V
Sbjct: 84 MVDQGEINYILGMRVRRDRQAGIIRIDQSAYLRNVLQRFGMDECRPISTPMETGKSFEKLAPDEKPVNLKSYQAAIGSLIYASIGTRPDLSYSV 177
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: Q9LVY5_ARATH (Copia-like retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9LVY5_ARATH) HSP 1 Score: 86.7 bits (213), Expect = 8.530e-17 Identity = 44/105 (41.90%), Postives = 66/105 (62.86%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVEGKVKISAPGNSERSSNSS--EYRGMVGSLMYASTGTRPNTAYAVHQAARRMRN 103
MKD+G SR+LGI + RNR GT+ +SQ Y+ +V++R + +GV TP+ K+SA N++ S ++ Y +VGS+MYA G RP+ AYA+ +R M N
Sbjct: 966 MKDMGAASRILGIDIERNREEGTLCLSQSKYLEKVIQRFRMADAKGVSTPIGAHFKLSAVRNNDESVDTEVCPYSSVVGSVMYAMIGNRPDVAYALGLVSRFMSN 1070
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: A0A537R0H1_9PROT (DDE-type integrase/transposase/recombinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R0H1_9PROT) HSP 1 Score: 86.3 bits (212), Expect = 1.130e-16 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVEGKVKISAPGNSERSSNSSEYRGMVGSLMYASTGTRPNTAYAVHQ 96
MKDLG ++ LG+ + R+R N TI ++Q YI V+KR G + C V TP+ K+ SE S N EY+ +VGSLMYA GTRP+ A+AV Q
Sbjct: 596 MKDLGEINHYLGMHIIRDRRNQTIHVNQTAYINAVIKRAGMEGCNAVSTPMIPGRKLETRKGSEPSVNKHEYQHLVGSLMYAMLGTRPDIAFAVQQ 691
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: A0A6D2J1R0_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J1R0_9BRAS) HSP 1 Score: 85.1 bits (209), Expect = 2.980e-16 Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVEGKVKISAPGNSERSSNSSE--YRGMVGSLMYASTGTRPNTAYAVHQAARRM 101
MKDLG SR+LGI ++R+R G + +SQ GY+ +V+KR E + V TP+ G K+SA ++ ++ + Y VGSLMYA GTRP+ AYA+ +R M
Sbjct: 1068 MKDLGAASRILGIDIKRDRKEGVLWLSQSGYLGKVIKRFNMVEAKTVNTPMGGHFKLSAVSDASECVDTEKVPYSSAVGSLMYAMVGTRPDLAYAIGLVSRFM 1170
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: A0A293MM55_ORNER (Reverse transcriptase, gag, polyprotein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MM55_ORNER) HSP 1 Score: 84.7 bits (208), Expect = 4.040e-16 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVE-GKVKISAPGNSERSSNSSEYRGMVGSLMYASTGTRPNTAYAVH 95
+KDLG +LG++V+R++ GTISISQ YI EVLKR+G + C+ V TP+E G + + E Y+ ++GSLMY GTRP+ A+AV+
Sbjct: 1053 LKDLGEPKYILGLEVKRDKTQGTISISQKKYIGEVLKRYGMENCKPVSTPIEPGLTQEESTSQREEQLQGIPYQSLIGSLMYLVQGTRPDIAFAVN 1148
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: Q9XEB4_ARATH (Putative polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9XEB4_ARATH) HSP 1 Score: 83.6 bits (205), Expect = 9.880e-16 Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVEGKVKISAPGNSERSSNSS--EYRGMVGSLMYASTGTRPNTAYAV 94
MKD+G SR+LGI + RNR GT+ +SQ Y+ +V++R + +GV TP+ K+SA N++ S ++ Y VGS+MYA GTRP+ YA+
Sbjct: 711 MKDMGAASRILGIDIERNREEGTLCLSQSKYLEKVIQRFRMADAKGVSTPIGAHFKLSAVRNNDESVDTEVCPYSSAVGSVMYAMIGTRPDVVYAL 806
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: A0A6D2KTV0_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KTV0_9BRAS) HSP 1 Score: 81.6 bits (200), Expect = 1.920e-15 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVEGKVKISAPGNSERSSNSS--EYRGMVGSLMYASTGTRPNTAYAVHQAARRM 101
MKDLG SR+LGI + RNR GT+ +SQ GY+++V++R E + V TP+ K+ + + ++ Y VGS+MYA GTRP+ AYA+ +R M
Sbjct: 37 MKDLGAASRILGIDITRNRKEGTLCLSQSGYLKKVIQRFNMGEAKVVSTPIGAHFKLYSVQDDSECVDTELVPYNSAVGSIMYAMIGTRPDIAYAIGLVSRFM 139
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: A0A6D2J0E6_9BRAS (Uncharacterized protein n=3 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J0E6_9BRAS) HSP 1 Score: 81.6 bits (200), Expect = 4.800e-15 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVEGKVKISAPGNSERSSNSS--EYRGMVGSLMYASTGTRPNTAYAVHQAARRM 101
MKDLG SR+LGI + RNR GT+ +SQ GY+++V++R E + V TP+ K+ + + ++ Y VGS+MYA GTRP+ AYA+ +R M
Sbjct: 1062 MKDLGAASRILGIDITRNRKEGTLCLSQSGYLKKVIQRFNMGEAKVVSTPIGAHFKLYSVQDDSECVDTELVPYNSAVGSIMYAMIGTRPDIAYAIGLVSRFM 1164
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: UPI00142E19AD (uncharacterized protein LOC103874474 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E19AD) HSP 1 Score: 81.3 bits (199), Expect = 6.540e-15 Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVEGKVKISAPGNSERSSNSSE--YRGMVGSLMYASTGTRPNTAYAVHQAARRM 101
MKD+G SR+LGI ++R+R T+ + Q GYI++VLKR E + V TP+ K+++ N++ ++ + Y VGS+MYA GTRP+ AYA+ +R M
Sbjct: 1061 MKDMGPASRILGIDIKRDREQDTLKLCQSGYIQKVLKRFKMSESKAVATPMGSHFKLASVKNADERIDTEKVPYLSAVGSVMYAMVGTRPDVAYALGLVSRFM 1163
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Match: A0A1J3F7G4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3F7G4_NOCCA) HSP 1 Score: 80.9 bits (198), Expect = 8.910e-15 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0
Query: 1 MKDLGFLSRVLGIQVRRNRPNGTISISQGGYIREVLKRHGFDECRGVPTPVEGKVKISAPGNSERSSNSSEY--RGMVGSLMYASTGTRPNTAYAVHQAARRM 101
MKD+G SR+LGI ++R+R G + +SQ Y+ +V+KR E + V TP+ G K+SA ++ +Y VGS+MYA GTRP+ AYA+ +R M
Sbjct: 1063 MKDMGAASRILGIDIKRDRKEGVLYLSQSSYLEKVVKRFNMGEAKSVNTPIGGHFKLSAVKEVSECIDTEKYPYSSAVGSVMYAMIGTRPDIAYAIGLISRFM 1165 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7256.15230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig7256.15230.1 ID=prot_H-paniculata_contig7256.15230.1|Name=mRNA_H-paniculata_contig7256.15230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bpback to top |