prot_H-paniculata_contig7207.15185.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7207.15185.1
Unique Nameprot_H-paniculata_contig7207.15185.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A182H216_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H216_AEDAL)

HSP 1 Score: 67.4 bits (163), Expect = 6.460e-11
Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    9 LQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHFRIVKTSML--PVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            L ++++++DLG+AKY LG   +R++ R EL IDQ  Y +   + F +     +  P  + ER L K   P  Q+E +E++  PY+EAVG L  +A   RP I++A
Sbjct:   28 LCNRFRMKDLGQAKYCLGLQISRNKERGELSIDQRKYIEDVLDRFNLTDCHPVSTPFESSER-LDKSMTPKSQDEIEEMKKVPYKEAVGCLQYIAQATRPDISFA 131          
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A1W7R6K6_AEDAL (Putative retrovirus-related pol polyprotein from transposon tnt (Fragment) n=4 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6K6_AEDAL)

HSP 1 Score: 66.6 bits (161), Expect = 1.720e-10
Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    9 LQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHFRIVKTSML--PVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            L ++++++DLG+AKY LG   +R++ R EL IDQ  Y +   + F +     +  P  + ER L K   P  Q E +E++  PY+EAVG L  +A   RP I++A
Sbjct: 1066 LCNRFRMKDLGQAKYCLGLQISRNKERGELSIDQRKYIEDVLDRFNLADCHPVSTPFESSER-LDKSMTPKSQNEMEEMKKVPYKEAVGCLQYIAQATRPDISFA 1169          
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A182HAB7_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAB7_AEDAL)

HSP 1 Score: 65.9 bits (159), Expect = 2.850e-10
Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    9 LQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHFRIVKTSML--PVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            L S++K++++GEAK+ LG   TRDR   +L +DQ  Y +   + F +  +  +  P+ +  + L K  GP   EE  E++  P++EAVG+L+  A   RP IA+A
Sbjct:  121 LNSRFKMKNIGEAKFCLGLQITRDRTNGKLFLDQQAYIKDVLKRFNMENSKPVATPMDSNVK-LDKSRGPKTPEEMAEMKNVPFKEAVGSLLYAAQATRPDIAFA 224          
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A182HAB6_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAB6_AEDAL)

HSP 1 Score: 63.9 bits (154), Expect = 1.140e-9
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    9 LQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHFRIVKTSML--PVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            L S++K++++GEAK+ LG   T DR   +L +DQ  Y +   + F +  +  +  P+ +  + L K  GP   EE  E++  P++EAVG+L+  A   RP IA+A
Sbjct:   28 LNSRFKMKNIGEAKFCLGLQITHDRTNGKLFLDQQAYIKDVLKRFNMENSKPVATPMDSNVK-LDKSRGPKTPEEMAEMKNVPFKEAVGSLLYAAQATRPDIAFA 131          
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A6A4CX45_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CX45_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.020e-8
Identity = 37/107 (34.58%), Postives = 59/107 (55.14%), Query Frame = 0
Query:    7 ADLQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHF--RIVKTSMLPVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            A +  K++I+DLG A++ LG     D  RR L I Q  Y+++  + F     K  + P+  G + L+K D P  +E+  +++  PYR  VG+LM +A   RP I+ A
Sbjct:   16 AGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVA 121          
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.220e-8
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    7 ADLQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHF--RIVKTSMLPVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            A +  K++I+D+G A++ LG     D  RR L I Q  Y+++  + F     K  + P+  G + L+K D P I+E+  +++  PYR  VG+LM +A   RP I+ A
Sbjct:   96 AGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVA 201          
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.550e-8
Identity = 36/107 (33.64%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    7 ADLQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHF--RIVKTSMLPVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            A +  K++I+D+G A++ LG     D  RR L I Q  Y+++  + F     K  + P+  G + L+K D P  +E+  ++++ PYR  VG+LM +A   RP I+ A
Sbjct:  619 AGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVA 724          
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A6A3GCZ8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GCZ8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.800e-8
Identity = 37/107 (34.58%), Postives = 59/107 (55.14%), Query Frame = 0
Query:    7 ADLQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHF--RIVKTSMLPVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            A +  K++I+DLG A++ LG     D  RR L I Q  Y+++  + F     K  + P+  G + L+K D P  +E+  +++  PYR  VG+LM +A   RP I+ A
Sbjct:  195 AGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADKPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVA 300          
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A6A3VHM4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VHM4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 9.590e-8
Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 0
Query:    7 ADLQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHF--RIVKTSMLPVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            A +  KY+I+D+G A++ LG     D  RR L I Q  Y+++  + F     K  + P+  G + L+K D P  +E   +++  PYR  VG+LM +A   RP I+ A
Sbjct:   96 AGIAEKYRIKDMGRARFILGIEIDYDMERRMLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEVKAKMKSKPYRSLVGSLMYLACGTRPDISVA 201          
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Match: A0A6A3GCN4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GCN4_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 9.830e-8
Identity = 37/113 (32.74%), Postives = 61/113 (53.98%), Query Frame = 0
Query:    1 MIMEQLADLQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSAEHF--RIVKTSMLPVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRVATMGRPYIAYA 111
            +I    A +  K++I+D+G A++ LG     D  RR L I Q  Y+++  + F     K  + P+  G + L+K D P  +E+  +++  PYR  VG+LM +A   RP I+ A
Sbjct:   58 LIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPYLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVA 169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7207.15185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182H216_AEDAL6.460e-1137.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1W7R6K6_AEDAL1.720e-1037.14Putative retrovirus-related pol polyprotein from t... [more]
A0A182HAB7_AEDAL2.850e-1036.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182HAB6_AEDAL1.140e-935.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4CX45_9STRA1.020e-834.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4F359_9STRA2.220e-834.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3YGI7_9STRA4.550e-833.64Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3GCZ8_9STRA4.800e-834.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3VHM4_9STRA9.590e-834.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3GCN4_9STRA9.830e-832.74Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7207contigH-paniculata_contig7207:10751..11083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7207.15185.1mRNA_H-paniculata_contig7207.15185.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7207 10581..11083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7207.15185.1 ID=prot_H-paniculata_contig7207.15185.1|Name=mRNA_H-paniculata_contig7207.15185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
MIMEQLADLQSKYKIEDLGEAKYYLGCHNTRDRFRRELKIDQYIYSQTSA
EHFRIVKTSMLPVTAGERPLSKEDGPHIQEEAQEIRVFPYREAVGALMRV
ATMGRPYIAYA
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