prot_H-paniculata_contig72064.15184.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig72064.15184.1
Unique Nameprot_H-paniculata_contig72064.15184.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length182
Homology
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: A0A507FH27_9FUNG (DNA-directed DNA polymerase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FH27_9FUNG)

HSP 1 Score: 122 bits (305), Expect = 8.840e-29
Identity = 65/171 (38.01%), Postives = 101/171 (59.06%), Query Frame = 0
Query:   13 PKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIFKIPVE-YWEFPESVRRLDKAIYGLVQAGRCWSMKITTDLTAKGF 182
            P N ++A A P  +HW  AE  E+Q L  N  +T V R  +   ++   +YK K+ +DG++E+++ RLVA G  Q  G  + E  SP + +A+ + +L+LAA+  W+ R  DF  A+L   +D  I+ +P + Y   P  +  L+KAIYGL QAGR W  ++T+ L AKG+
Sbjct: 1034 PSNRKQAMAGPNKQHWLDAESYELQQLETNNTYTLVNRTASIKCITCRWVYKCKLNQDGSIERFRARLVARGFLQRHGYDYMETYSPVMRIATFRWLLALAALNNWQTRSADFSSAFLYGVLDTPIYMLPPDGYNADPTKIWLLNKAIYGLKQAGRVWFYRLTSYLKAKGY 1204          
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 114 bits (285), Expect = 4.280e-26
Identity = 64/172 (37.21%), Postives = 98/172 (56.98%), Query Frame = 0
Query:   12 EPKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIF-KIPVEYWEFPESVRRLDKAIYGLVQAGRCWSMKITTDLTAKGF 182
            EP+   EA + P+   W+ A   E+   +   ++ +V+RP N  V+    ++K K G DG +EKYK RLVA G  Q++G+ F E  +P    AS + +L+LAA    E+  +D + A+L   +D+EI+ K+P  +      V +L+KA+YGL QAGR W  KI  +  A GF
Sbjct:  925 EPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDEVERPRNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGF 1096          
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: A0A401H317_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H317_9APHY)

HSP 1 Score: 114 bits (284), Expect = 5.600e-26
Identity = 64/172 (37.21%), Postives = 98/172 (56.98%), Query Frame = 0
Query:   12 EPKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIF-KIPVEYWEFPESVRRLDKAIYGLVQAGRCWSMKITTDLTAKGF 182
            EP+   EA + P+   W+ A   E+   +   ++ +V+RP N  V+    ++K K G DG +EKYK RLVA G  Q++G+ F E  +P    AS + +L+LAA    E+  +D + A+L   +D+EI+ K+P  +      V +L+KA+YGL QAGR W  KI  +  A GF
Sbjct:  866 EPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDEVERPQNRKVIDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFRRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGF 1037          
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 114 bits (284), Expect = 5.760e-26
Identity = 61/172 (35.47%), Postives = 97/172 (56.40%), Query Frame = 0
Query:   12 EPKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIF-KIPVEYWEFPESVRRLDKAIYGLVQAGRCWSMKITTDLTAKGF 182
            EP++  EAQA PEW  W++A + E   L   G W     P +   +    +++RK  ++G V KYK RLVA G  QI G+ F E  +P + + S + +L+LA +  WE+  +D + AYL   + +EI+ + P  + +    + RL K +YGL Q+GR W+ K+  +LT  G+
Sbjct:  906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGY 1077          
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: A0A2K3KL34_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KL34_TRIPR)

HSP 1 Score: 107 bits (267), Expect = 5.860e-26
Identity = 54/157 (34.39%), Postives = 89/157 (56.69%), Query Frame = 0
Query:   28 WQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIF-KIPVEYW-EFPESVRRLDKAIYGLVQAGRCWSMKITTDLTAKGF 182
            W+ A + E+Q L  N  W+  + P     +    +Y+ K   DG VE++K RLV   N Q++G+++ E  +P   +   + +L++AA K WEL  +D   A+L   + +E+F K+P  ++   P+ V +L K++YGL QA RCW  K++  L A GF
Sbjct:    6 WREAMQTEIQALERNDTWSMQRLPPGKKALGCKWVYRIKYHSDGTVERFKARLVVLDNHQVEGINYTETFAPVAKMVIVRTVLAVAAAKAWELHQMDVHNAFLHGDLHEEVFMKMPPGFFVSQPDMVCKLQKSLYGLKQAPRCWFAKLSAALKAYGF 162          
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: A0A8J6LFP5_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LFP5_TENMO)

HSP 1 Score: 112 bits (281), Expect = 1.150e-25
Identity = 65/174 (37.36%), Postives = 100/174 (57.47%), Query Frame = 0
Query:    9 LPVEPKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIF-KIPVEYWEFPESVRRLDKAIYGLVQAGRCWSMKITTDLTAKG 181
            L  EP++  EA +    EHW++A + E+Q L  N  WT V+ P N   +    +YK K  EDG+V+KYK RLVA G RQ+ GV + E  SP     S + +L +A  +   LR  D + A+L   ID+ ++ + P  Y +  + V +L++++YGL QA RCW+ + T+ L+  G
Sbjct:  129 LNAEPESFEEATSSGNSEHWKQAMDEEIQSLKQNQTWTLVEPPKNQQFIDNRWVYKIKRNEDGSVQKYKARLVARGFRQVAGVDYNETFSPVTKFDSIRMILCVAVSEKLILRQFDVKTAFLYGNIDEILYMQQPDGYQDGTKRVCKLNRSLYGLKQASRCWNQRFTSVLSRLG 302          
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 112 bits (280), Expect = 1.930e-25
Identity = 63/172 (36.63%), Postives = 98/172 (56.98%), Query Frame = 0
Query:   12 EPKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIF-KIPVEYWEFPESVRRLDKAIYGLVQAGRCWSMKITTDLTAKGF 182
            EP+   EA + P+   W+ A   E+   +   ++ +V+RP N  V+    ++K K G DG +EKYK RLVA G  Q++G+ F E  +P    AS + +L+LAA    E+  +D + A+L   +D+EI+ K+P  +      + +L+KA+YGL QAGR W  KI  +  A GF
Sbjct:  602 EPQTYEEAMSRPDAARWKAACAEELHAFVKAELYDKVERPRNRKVIDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGF 773          
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 110 bits (276), Expect = 6.200e-25
Identity = 66/172 (38.37%), Postives = 93/172 (54.07%), Query Frame = 0
Query:   12 EPKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIFKIPVEYWEFPES-VRRLDKAIYGLVQAGRCWSMKITTDLTAKGF 182
            EP   +EA        W RA E E   L+ N  +  V  P     +SM  +YK  I E     +YK RLV  G  Q+ G+ FQE  SP +  +S + ++S+AA+K W++ H+D + AYL   +++EI+  P   +  P+  V RL KA+YGL QAGRCW+ KIT  L    F
Sbjct:  224 EPATYKEAIGGDNAAKWDRAMEEERNSLVKNNTYEVVDLPPGKKTLSMKWVYK--IKETEGDRRYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKF 393          
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: UPI0020240260 (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020240260)

HSP 1 Score: 108 bits (269), Expect = 6.760e-25
Identity = 61/174 (35.06%), Postives = 99/174 (56.90%), Query Frame = 0
Query:   12 EPKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIFKIPVEYWEFPES---VRRLDKAIYGLVQAGRCWSMKITTDLTAKGF 182
            EP N  EA A P+ + W  A + E+  +  N VWT    P++   +    ++K+K   DGNV  YK RLVA G RQ++GV + E  SP   + S + ML++AA   +E+  +D + A+L   + +E++ +  E +  P++   V +L ++IYGLVQA R W+++    + A GF
Sbjct:   15 EPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGF 188          
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 110 bits (276), Expect = 6.780e-25
Identity = 66/172 (38.37%), Postives = 93/172 (54.07%), Query Frame = 0
Query:   12 EPKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKRPNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPALAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIFKIPVEYWEFPES-VRRLDKAIYGLVQAGRCWSMKITTDLTAKGF 182
            EP   +EA        W RA E E   L+ N  +  V  P     +SM  +YK  I E     +YK RLV  G  Q+ G+ FQE  SP +  +S + ++S+AA+K W++ H+D + AYL   +++EI+  P   +  P+  V RL KA+YGL QAGRCW+ KIT  L    F
Sbjct:  829 EPATYKEAIGGDNAAKWDRAMEEERNSLVKNNTYEVVDLPPGKKTLSMKWVYK--IKETEGDRRYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKF 998          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig72064.15184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A507FH27_9FUNG8.840e-2938.01DNA-directed DNA polymerase n=1 Tax=Chytriomyces c... [more]
A0A401G4V0_9APHY4.280e-2637.21Retrovirus-related Pol polyprotein from transposon... [more]
A0A401H317_9APHY5.600e-2637.21Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GYH9_9APHY5.760e-2635.47Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A2K3KL34_TRIPR5.860e-2634.39Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J6LFP5_TENMO1.150e-2537.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H123_9APHY1.930e-2536.63Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5GI29_9HEMI6.200e-2538.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00202402606.760e-2535.06hypothetical protein n=1 Tax=Proteus mirabilis Tax... [more]
A0A6H5GGZ1_9HEMI6.780e-2538.37Integrase catalytic domain-containing protein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..182
e-value: 1.0E-27
score: 97.4
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 22..181
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 22..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig72064contigH-paniculata_contig72064:117..662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig72064.15184.1mRNA_H-paniculata_contig72064.15184.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig72064 117..662 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig72064.15184.1 ID=prot_H-paniculata_contig72064.15184.1|Name=mRNA_H-paniculata_contig72064.15184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=182bp
MPEELRGDLPVEPKNNREAQALPEWEHWQRAEEVEMQGLINNGVWTQVKR
PNNNLVMSMMMLYKRKIGEDGNVEKYKCRLVAHGNRQIKGVHFQEASSPA
LAVASTKRMLSLAAIKTWELRHVDFERAYLQAPIDQEIFKIPVEYWEFPE
SVRRLDKAIYGLVQAGRCWSMKITTDLTAKGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like