prot_H-paniculata_contig7169.15145.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7169.15145.1
Unique Nameprot_H-paniculata_contig7169.15145.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length168
Homology
BLAST of mRNA_H-paniculata_contig7169.15145.1 vs. uniprot
Match: D7FXW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW7_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 3.540e-83
Identity = 135/168 (80.36%), Postives = 153/168 (91.07%), Query Frame = 0
Query:    1 MLSLCPQLLALDFEGQVKPSMELLRQRLGMRPTDVRRVMRKAPEVLAPRADGSTAADAVDVLRALGLQTRHLRLEALRWPQLLAVPPSSFFQLAAFLCSEEVGVKAADVGSLIRQAPWLVLENIDGQMLPAVKFLTRVGVTDLERVVRAYPKILCASIRGELAPRVSY 168
            ML+LCPQLLALDFEGQV P+MELLRQ LGMRPTDVRRV+RKAPEVLAPR DGSTAA+AVDVLR LGL+ RHL++EA+RWPQLLAVPP SFFQLAAFL SEEVG+K+ ++GSLIRQAPWLVL+ IDGQMLP V+FL   GV D+ERV+RAYPK+LCASIRGELAPRV +
Sbjct:  258 MLALCPQLLALDFEGQVVPTMELLRQ-LGMRPTDVRRVIRKAPEVLAPRPDGSTAAEAVDVLRTLGLRRRHLKMEAMRWPQLLAVPPGSFFQLAAFLASEEVGIKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVVDVERVLRAYPKVLCASIRGELAPRVRF 424          
BLAST of mRNA_H-paniculata_contig7169.15145.1 vs. uniprot
Match: A0A6H5KUV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV8_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 2.020e-78
Identity = 133/168 (79.17%), Postives = 151/168 (89.88%), Query Frame = 0
Query:    1 MLSLCPQLLALDFEGQVKPSMELLRQRLGMRPTDVRRVMRKAPEVLAPRADGSTAADAVDVLRALGLQTRHLRLEALRWPQLLAVPPSSFFQLAAFLCSEEVGVKAADVGSLIRQAPWLVLENIDGQMLPAVKFLTRVGVTDLERVVRAYPKILCASIRGELAPRVSY 168
            ML+LCPQLLALDFEGQV P+MELLRQ LGMRPTDVRRV+RKAPEVLAPR DGSTAA+AVDVLR LGL+ RHL++EA+RWPQLL VPP SFFQLAAFL SEEVG+K+ ++GSLIRQAPWLVL+ IDGQMLP V+FL   GV D+ERV+RAYPK+L ASIRGELAPRV +
Sbjct:  718 MLALCPQLLALDFEGQVVPTMELLRQ-LGMRPTDVRRVIRKAPEVLAPRPDGSTAAEAVDVLRTLGLRRRHLKMEAMRWPQLLVVPPGSFFQLAAFLASEEVGIKSTNIGSLIRQAPWLVLQPIDGQMLPVVRFLRIAGVADVERVLRAYPKVLSASIRGELAPRVRF 884          
BLAST of mRNA_H-paniculata_contig7169.15145.1 vs. uniprot
Match: A0A835Z724_9STRA (mTERF-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z724_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.050e-43
Identity = 82/168 (48.81%), Postives = 115/168 (68.45%), Query Frame = 0
Query:    6 PQLLALDFEGQVKPSMELLRQRLGMRPTDVRRVMRKAPEVLAPRADGSTAADAVDVLRALGLQTRHLRLEALRWPQLLAVPPSSFFQLAAFLCSEEVGVKAADVGS------LIRQAPWLVLENIDGQMLPAVKFLTR-VGVTDLERVVRAYPKILCASIRGELAPRV 166
            PQLL + F   V P MEL+RQ LG RPTD RRV+R+AP+VL PR DGST  D +  L+ALGL+ + + +E +RWP+LL   P+S  +LA +L S EVG++AA   S      ++RQAPWL   +++ Q+ P  ++L   +G+ D++RV+RAYP+ILC SI  +L PRV
Sbjct:    6 PQLLDMCFSADVVPVMELMRQELGFRPTDARRVLRRAPQVLLPRQDGSTPVDTIAALQALGLKPKMVSMEVIRWPRLLTYSPASLMELATWLGSAEVGMRAASDDSSAVSLNVLRQAPWLAEHDLETQLRPVARYLQESLGIRDMQRVLRAYPQILCCSITKDLEPRV 173          
BLAST of mRNA_H-paniculata_contig7169.15145.1 vs. uniprot
Match: A0A7S2D3S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3S4_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.340e-24
Identity = 56/167 (33.53%), Postives = 95/167 (56.89%), Query Frame = 0
Query:    2 LSLCPQLLALDFEGQVKPSMELLRQRLGMRPTDVRRVMRKAPEVLAPRADGSTAADAVDVLRALGLQTRHLRLEALRWPQLLAVPPSSFFQLAAFLCSEEVGVKAADVGSLIRQAPWLVLENIDGQMLPAVKFLTRVGVTDLERVVRAYPKILCASIRGELAPRVSY 168
            LS CP++           ++ +L+    +R  D+RR+ R  P +L      S   + +  L  + L  ++L+L  LRWP++L    ++   L+ FL   +VG K   +GSL+R+APWL+  N++ QM P V+FLT++ V  +E V+RAYP++L   ++ EL PR+ +
Sbjct:  136 LSACPEISNKAQAVSAVQTLTILQNTFELRRYDLRRIARSEPTILLK----SDLTETLQALNDMKLSGKNLKLTLLRWPKILTYSTTTILNLSGFLSHPQVGFKEDQIGSLVRKAPWLLDGNLETQMGPVVRFLTKLQVRRIETVIRAYPQVLLTDVKTELLPRIEF 298          
BLAST of mRNA_H-paniculata_contig7169.15145.1 vs. uniprot
Match: A0A7S3YEI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEI3_HETAK)

HSP 1 Score: 106 bits (264), Expect = 1.320e-23
Identity = 53/126 (42.06%), Postives = 88/126 (69.84%), Query Frame = 0
Query:   28 LGMRPTDVRRVMRKAPEVLAPRADGSTAADAVDVLRALGLQTRHLRLEALRWPQLLAVPPSSFFQLAAFLCSEEVGVKAADVGSLIRQAPWLVLENIDGQMLPAVKFLTRVGVTDLERVVRAYPKI 153
            +G+R ++VR+V+R+AP++LAPRADG++AAD    L  +GL+ R LR   +  P+LLA  P + F+ +AFL S++VG +AA +G+L ++APWL    +  ++    ++L ++GV D+E V R YP++
Sbjct:   92 VGLRRSEVRKVVRRAPQLLAPRADGTSAADTAAALALVGLRPRALRAALVAHPRLLAHTPRAVFECSAFLMSKDVGAQAAHLGALYKRAPWLPGRPV-AELRAVARWLRQIGVEDVENVFRGYPEV 216          
BLAST of mRNA_H-paniculata_contig7169.15145.1 vs. uniprot
Match: A0A7S2Y096_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y096_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.100e-15
Identity = 40/124 (32.26%), Postives = 75/124 (60.48%), Query Frame = 0
Query:   39 MRKAPEVLAPRADGSTAADAVDVLRALGLQTRHLRLEALRWPQLLAVPPSSFFQLAAFLCSEEVGVKAADVGSLIRQAPWLVLENIDGQMLPAVKFLTRVGVTDLERVVRAYPKILCASIRGEL 162
            +++ P+V+ PR DGST AD +     +G + +      ++ P L+  PP   F +++++ S++V +K   +GSL R+APWL+ +N++  M    ++LT +G    E+V RA+P++L  +I+  L
Sbjct:    1 VKQIPQVMVPRKDGSTIADTIKAFGMIGFKGKSFLNTVMQHPSLILHPPLQVFLVSSYMMSKQVRIKRNGLGSLYRKAPWLLDQNVE-DMRKVGRWLTNIGXXXXEQVFRAHPEVLLQNIKQTL 123          
BLAST of mRNA_H-paniculata_contig7169.15145.1 vs. uniprot
Match: F0Y3H4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3H4_AURAN)

HSP 1 Score: 70.9 bits (172), Expect = 3.220e-11
Identity = 54/182 (29.67%), Postives = 89/182 (48.90%), Query Frame = 0
Query:   15 GQVKPSMELLRQRLGMRPTDVRRVMRKAPEVLA-PRADGS-----------------------------TAA--DAVDVLRALGLQTRHLRLEALRWPQLLAVPPSSFFQLAAFLCSEEVGVKAADVGSLIRQAPWLVLENIDGQMLPAVKFLTRVGVTDLERVVRAYPKILCASIRGELAP 164
            G V+ +++ L +   MR  D+R+V+R+ P++L  P AD S                             TAA  D V +L ++G++T+H++   +RWPQLL++       +  ++ S  +G + + +GSL R  PWL+   +      A      VGVT++E VVRAYP+ L +     L P
Sbjct:  119 GDVRATVQFLSKTFAMRKYDLRKVVREQPKILLKPAADASIFDTGACPAVLAATSGGPAAGPRSGDLDATAAISDTVLLLTSVGVRTKHVKEMVVRWPQLLSIEMPQMLAVTDYINS--LGFERS-IGSLYRANPWLLAAPVATVRDAATVLRDEVGVTNVENVVRAYPRALLSDRESLLRP 297          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7169.15145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FXW7_ECTSI3.540e-8380.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUV8_9PHAE2.020e-7879.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z724_9STRA1.050e-4348.81mTERF-domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S2D3S4_9STRA5.340e-2433.53Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3YEI3_HETAK1.320e-2342.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y096_9STRA1.100e-1532.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y3H4_AURAN3.220e-1129.67Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 36..68
e-value: 3100.0
score: 0.1
coord: 1..31
e-value: 55.0
score: 12.6
coord: 110..141
e-value: 16.0
score: 14.4
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 1..90
e-value: 4.9E-8
score: 32.3
coord: 100..168
e-value: 3.5E-6
score: 26.2
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 96..168
e-value: 2.9E-7
score: 31.9
coord: 1..95
e-value: 2.7E-7
score: 32.0
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 80..168
NoneNo IPR availablePANTHERPTHR13068:SF78MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 80..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7169contigH-paniculata_contig7169:7171..11396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7169.15145.1mRNA_H-paniculata_contig7169.15145.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7169 7150..11396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7169.15145.1 ID=prot_H-paniculata_contig7169.15145.1|Name=mRNA_H-paniculata_contig7169.15145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
MLSLCPQLLALDFEGQVKPSMELLRQRLGMRPTDVRRVMRKAPEVLAPRA
DGSTAADAVDVLRALGLQTRHLRLEALRWPQLLAVPPSSFFQLAAFLCSE
EVGVKAADVGSLIRQAPWLVLENIDGQMLPAVKFLTRVGVTDLERVVRAY
PKILCASIRGELAPRVSY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf