prot_H-paniculata_contig71333.15110.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig71333.15110.1
Unique Nameprot_H-paniculata_contig71333.15110.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: A0A6B7EYM7_9PHAE (50S ribosomal protein L4 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYM7_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 8.850e-21
Identity = 43/51 (84.31%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 DKVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            DK+LTFP K+LTGSDT +E VTLTLK+KEGQET+NYIIYRAYIAQRTNERQ
Sbjct:   22 DKILTFPTKVLTGSDTSKETVTLTLKIKEGQETNNYIIYRAYIAQRTNERQ 72          
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: A0A1I9LVD9_9PHAE (50S ribosomal protein L4, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVD9_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.430e-18
Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 0
Query:    1 DKVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            DKVLTFPIK LTG + +E I TLTLKVKEGQETDNYIIYRAY+AQRTNERQ
Sbjct:   20 DKVLTFPIKFLTGENNKE-IATLTLKVKEGQETDNYIIYRAYVAQRTNERQ 69          
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: D1J751_ECTSI (50S ribosomal protein L4, chloroplastic n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J751_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 6.040e-17
Identity = 38/51 (74.51%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 DKVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            DK+LTFP+K+LTG + + E V+LTL++KEGQETDNYI+YRAYIAQRTNERQ
Sbjct:   20 DKILTFPLKLLTGEE-KNETVSLTLQIKEGQETDNYILYRAYIAQRTNERQ 69          
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: A0A7T8G5K9_SCYLO (50S ribosomal protein L4, chloroplastic n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8G5K9_SCYLO)

HSP 1 Score: 72.8 bits (177), Expect = 3.690e-14
Identity = 39/51 (76.47%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 DKVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            DKVLTFPIK L G D +E   TLTL+VKE QET+NYIIYRAYIAQR NERQ
Sbjct:   44 DKVLTFPIKPLVGGDNKET-ATLTLQVKEKQETENYIIYRAYIAQRINERQ 93          
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: D1GJT1_FUCVE (50S ribosomal protein L4, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJT1_FUCVE)

HSP 1 Score: 68.2 bits (165), Expect = 1.200e-12
Identity = 32/51 (62.75%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 DKVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            +K LTFPIK+LTG++++++I TLTLKVK+  ET+NY+I+RAY+ QR NERQ
Sbjct:    4 EKTLTFPIKLLTGNESKDKI-TLTLKVKDANETNNYVIHRAYLTQRLNERQ 53          
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: A0A0R6LUU1_UNDPI (50S ribosomal protein L4, chloroplastic n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUU1_UNDPI)

HSP 1 Score: 65.9 bits (159), Expect = 9.080e-12
Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    2 KVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            K+LTFP+KILTG ++ +EI TLTLK+KE   T NY+I RAY+AQR+NERQ
Sbjct:    5 KILTFPVKILTGEESGDEI-TLTLKLKEATNTINYVIQRAYLAQRSNERQ 53          
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: A0A8F0FAT9_9PHAE (Ribosomal protein L4 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAT9_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.710e-9
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 DKVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            +K+LTFPIK+LTG ++ + I TLTLK KE   T NYII+RAY+ Q  NERQ
Sbjct:    4 EKILTFPIKLLTGEESGDNI-TLTLKSKELSNTSNYIIHRAYLTQLYNERQ 53          
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: A0A8F0F722_AKKLU (Ribosomal protein L4 n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F722_AKKLU)

HSP 1 Score: 58.2 bits (139), Expect = 7.380e-9
Identity = 30/50 (60.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    2 KVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            K+LTFPIK+LTG ++ ++I TLTLK KE  +  NY+I RAY+ QR NERQ
Sbjct:    5 KILTFPIKLLTGKESGDKI-TLTLKSKEITDKSNYVIQRAYLTQRYNERQ 53          
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: A0A8F0FA21_9PHAE (Ribosomal protein L4 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FA21_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 2.040e-7
Identity = 27/50 (54.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    2 KVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            K++TFPIK +TG ++ ++I TL LK+K+   T+NY+I RAY+ QR NERQ
Sbjct:    5 KLITFPIKSITGKESGDKI-TLNLKLKDVVTTNNYVIQRAYLTQRLNERQ 53          
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Match: A0A8F0JXJ6_9PHAE (Ribosomal protein L4 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXJ6_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 4.080e-7
Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 DKVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNERQ 51
            +K+LTFPIK LTG+++ ++I  + LK+ E   T NYII RAY+ QR NERQ
Sbjct:    4 EKILTFPIKDLTGAESGKKIKVI-LKLTEQNNTSNYIIQRAYLTQRYNERQ 53          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig71333.15110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6B7EYM7_9PHAE8.850e-2184.3150S ribosomal protein L4 n=1 Tax=Cladosiphon okamu... [more]
A0A1I9LVD9_9PHAE1.430e-1884.3150S ribosomal protein L4, chloroplastic n=1 Tax=Pl... [more]
D1J751_ECTSI6.040e-1774.5150S ribosomal protein L4, chloroplastic n=2 Tax=Ec... [more]
A0A7T8G5K9_SCYLO3.690e-1476.4750S ribosomal protein L4, chloroplastic n=5 Tax=Sc... [more]
D1GJT1_FUCVE1.200e-1262.7550S ribosomal protein L4, chloroplastic n=3 Tax=Fu... [more]
A0A0R6LUU1_UNDPI9.080e-1266.0050S ribosomal protein L4, chloroplastic n=28 Tax=L... [more]
A0A8F0FAT9_9PHAE2.710e-960.78Ribosomal protein L4 n=1 Tax=Desmarestia aculeata ... [more]
A0A8F0F722_AKKLU7.380e-960.00Ribosomal protein L4 n=1 Tax=Akkesiphycus lubricus... [more]
A0A8F0FA21_9PHAE2.040e-754.00Ribosomal protein L4 n=1 Tax=Chorda asiatica TaxID... [more]
A0A8F0JXJ6_9PHAE4.080e-754.90Ribosomal protein L4 n=1 Tax=Protohalopteris sp. T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig71333contigH-paniculata_contig71333:1..153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig71333.15110.1mRNA_H-paniculata_contig71333.15110.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig71333 1..153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig71333.15110.1 ID=prot_H-paniculata_contig71333.15110.1|Name=mRNA_H-paniculata_contig71333.15110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
DKVLTFPIKILTGSDTREEIVTLTLKVKEGQETDNYIIYRAYIAQRTNER
Q
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