prot_H-paniculata_contig7131.15108.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7131.15108.1
Unique Nameprot_H-paniculata_contig7131.15108.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length401
Homology
BLAST of mRNA_H-paniculata_contig7131.15108.1 vs. uniprot
Match: A0A6H5JJL0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL0_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 3.680e-103
Identity = 201/394 (51.02%), Postives = 246/394 (62.44%), Query Frame = 0
Query:   25 TFQDEKVAERMLEKVQAFIREAREGGLADGG------------ENEIAEQIPLELEVLIDDSWLDEMACGLFLLVALVLMTCPYSEVVEFDAESGAMALDRWNLYRCGIFRYSCALENVSKLEITESDVWIMSAHAFDHMRKRKEFGLRMLFSLPQGRPG-TGVIPSAPPPLANASLSAND----SPALPLAIVTASAAPAGGTSLGGGSFSRRGTGASTAARRWEDEQRSSLRARGVLRSCLCFMRRFFICFGRGSGSCGRRPGGGGGNARVGCWWGGGHPVTRSA-GNGGGLMYLELGFGHKSQDDRKLRNPVGLVNDLLLRFSRFGSDTQAGVEHKPERSTEGSCCVCFRRRARVVTFPCMHMAVCPQCSENLSACPLCRGSINERHTVFL 400
            T  DE +AERMLEKV +FIREAR+GG ++              E   AEQ PLELEV  DDSWLDEMACGLFL++AL LMT PY EVVEFDA+SGAMALDRWNL+ CG+FRYSCALEN+SK+EITE +V++MSAHAF+H+R+ KEFGLR++FS+P G    T   P +P P +NA+++ +D    SP+     ++  +   GG  +  G+ +RR  GA    RRW           GVL       RR  +C GR     G R            WW    P  R      G LMYL L FG K  DDR LR PV +VN+LLLRF+         VE       EG+CCVCFRRR+RVV FPCMHMA CPQCSE+L+ CPLCR +I+E+HTVFL
Sbjct:  269 TVADEALAERMLEKVDSFIREARQGGNSNSNNLSSHGRGAGATEKGTAEQAPLELEVHYDDSWLDEMACGLFLVIALALMTRPYVEVVEFDADSGAMALDRWNLFNCGVFRYSCALENISKIEITEGNVYMMSAHAFEHLRQTKEFGLRVIFSVPLGASQETTAHPRSPRP-SNAAMNLSDTDGSSPSSDGDGISGVSGTVGGAPVARGT-ARRAVGAPR-RRRW-----------GVL------FRRLLLC-GRAGWCFGGRG-----------WWR--RPAARGVLSTSGELMYLNLLFGKKELDDRNLRRPVEMVNELLLRFAN-------DVEVDGGEKKEGNCCVCFRRRSRVVMFPCMHMATCPQCSESLAVCPLCRANISEKHTVFL 621          
BLAST of mRNA_H-paniculata_contig7131.15108.1 vs. uniprot
Match: D8LC33_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC33_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 8.510e-76
Identity = 168/405 (41.48%), Postives = 208/405 (51.36%), Query Frame = 0
Query:    1 MHWGVKDVGTLVLEDNLGNTYEFYTFQDEKVAERMLEKVQAFIREAREGGLADGGENEIAEQIPLELEVLIDDSWLDEMACGLFLLVALVLMTCPYSEVVEFDAESGAMALDRWNLYRCGIFRYSCALENVSKLEITESDVWIMSAHAFDHMRKRKEFGLRMLFSLPQGRPGTGVIPSAPPPLANASLSAND----SPALPLAIVTASAAPAGGTSLGGGSFSRRGTGASTAARRWEDEQRSSLRARGVLRSCLCFMRRFFICFGRGSGSCGRRPGGGGGNARVGCWWGGGHPVTRSA-GNGGGLMYLELGFGHKSQDDRKLRNPVGLVNDLLLRFSRFGSDTQAGVEHKPERSTEGSCCVCFRRRARVVTFPCMHMAVCPQCSENLSACPLCRGSINERHTVFL 400
            ++ GV DV TLVLEDN G TY+FYTFQ                                                                       VVEFDA+SGAMALDRWNL+ CG+FRYSCALEN+SK+EITE +V++MSAHAF+H+R+ KEFGLR++FS+P G           P   NA ++ +D    SP+     ++A +   GG  +   + +RR  GA    RRW           GVL       RR  +C GR     G R            WW    P  R      G LMYL L FG K  DDR LR PV +VN+LLLRF+   +D +  V  K E    G+CCVCFRRR+RVVTFPCMHMA CPQCSE+L+ CPLCR +I+E+HTVFL
Sbjct:  130 LNMGVNDVATLVLEDNQGITYDFYTFQ-----------------------------------------------------------------------VVEFDADSGAMALDRWNLFHCGVFRYSCALENISKVEITEGNVYMMSAHAFEHLRQTKEFGLRVIFSVPLGASQAATAHPRSPRPNNAGMNFSDPGGSSPSSDGDGISAVSGTVGGAPVARAA-ARRAAGAPR-RRRW-----------GVL------FRRLLLC-GRAGWCFGGRG-----------WWR--RPAARGVLSTSGELMYLNLLFGKKELDDRNLRRPVEMVNELLLRFA---NDVEVDVGEKKE----GNCCVCFRRRSRVVTFPCMHMATCPQCSESLTVCPLCRANISEKHTVFL 423          
BLAST of mRNA_H-paniculata_contig7131.15108.1 vs. uniprot
Match: A0A7S2Y0H0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0H0_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.340e-19
Identity = 62/161 (38.51%), Postives = 92/161 (57.14%), Query Frame = 0
Query:   10 TLVLEDNLGNTYEFYTFQDEKVAERMLEKVQAFIREAREGGLADGGENEIAEQIPLELEVLIDDSWLDEMACGLFLLVALVLMTCPYSEVVEFDAESGAMALDRWNLYRCGIFRYSCALENVSKLEITESDVWIMSA---HAFDHMRKRKEFGLRMLFSLP 167
            ++VLEDN  NTY FYTFQD + A R+ + V  ++  ARE            ++  L L +  DDS++DE A  +F ++A++L+     EV  FDAESG   L+R NL       Y+CALEN+S L+I    V+  ++   H  +H+ +R+EF LR+L   P
Sbjct:  138 SVVLEDNEDNTYIFYTFQDLETACRVYDHVLRYLLNARE------------QRDRLRLNLDYDDSYMDEAAVAVFAVLAVLLLWKHCKEVAVFDAESGVFRLERSNLVSRPQVLYTCALENISALQIAGDTVFTFTSSRRHTDNHLMERQEFSLRVLLCRP 286          
BLAST of mRNA_H-paniculata_contig7131.15108.1 vs. uniprot
Match: A0A812HU79_9DINO (RngB protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812HU79_9DINO)

HSP 1 Score: 58.2 bits (139), Expect = 8.900e-6
Identity = 30/97 (30.93%), Postives = 49/97 (50.52%), Query Frame = 0
Query:  304 ELGFGHKSQDDRKLRNPVGLVNDLLLRFSRFGSDTQAGVEHKPERSTEGSCCVCFRRRARVVTFPCMHMAVCPQCSENLSACPLCRGSINERHTVFL 400
            EL   H ++ +R+ R  + L N LL       ++    ++   E   + +CCVC      V+  PC H A+C +C+E +S+CP+CR  +  R  V L
Sbjct:  221 ELALTHIAEAERE-RESLELANMLLK------AEYDDCLKESQELLAQKTCCVCMNSLRSVLLRPCSHFALCTECAERISSCPMCRVPVEHRIVVML 310          
BLAST of mRNA_H-paniculata_contig7131.15108.1 vs. uniprot
Match: A0A813AZ03_9DINO (RngB protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813AZ03_9DINO)

HSP 1 Score: 57.0 bits (136), Expect = 2.150e-5
Identity = 28/88 (31.82%), Postives = 43/88 (48.86%), Query Frame = 0
Query:  313 DDRKLRNPVGLVNDLLLRFSRFGSDTQAGVEHKPERSTEGSCCVCFRRRARVVTFPCMHMAVCPQCSENLSACPLCRGSINERHTVFL 400
            D  + R  + L N LL       ++    +  + E   + +CCVC      VV  PC H A+C +C+E +S+CP+CR  +  R  V L
Sbjct:  231 DGERERESLELANMLLK------AEYDDCLNERQELLAQKTCCVCMHSLRCVVLRPCSHFALCTECAERISSCPMCRVPVEHRIVVML 312          
BLAST of mRNA_H-paniculata_contig7131.15108.1 vs. uniprot
Match: A0A812SIK4_9DINO (RngB protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812SIK4_9DINO)

HSP 1 Score: 57.8 bits (138), Expect = 2.360e-5
Identity = 28/88 (31.82%), Postives = 43/88 (48.86%), Query Frame = 0
Query:  313 DDRKLRNPVGLVNDLLLRFSRFGSDTQAGVEHKPERSTEGSCCVCFRRRARVVTFPCMHMAVCPQCSENLSACPLCRGSINERHTVFL 400
            D  + R  + L N LL       ++    +  + E   + +CCVC      VV  PC H A+C +C+E +S+CP+CR  +  R  V L
Sbjct:  558 DGERERESLELANMLLK------AEYDDCLNERQELLAQKTCCVCMHSLRSVVLRPCSHFALCTECAERISSCPMCRVPVEHRIVVML 639          
BLAST of mRNA_H-paniculata_contig7131.15108.1 vs. uniprot
Match: A0A1Q9EZ49_SYMMI (RING finger protein B n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EZ49_SYMMI)

HSP 1 Score: 57.0 bits (136), Expect = 5.200e-5
Identity = 28/88 (31.82%), Postives = 43/88 (48.86%), Query Frame = 0
Query:  313 DDRKLRNPVGLVNDLLLRFSRFGSDTQAGVEHKPERSTEGSCCVCFRRRARVVTFPCMHMAVCPQCSENLSACPLCRGSINERHTVFL 400
            D  + R  + L N LL       ++    +  + E   + +CCVC      VV  PC H A+C +C+E +S+CP+CR  +  R  V L
Sbjct: 1352 DGERERESLELANMLLK------AEYDDCLNERQELLAQKTCCVCMHSLRCVVLRPCSHFALCTECAERISSCPMCRVPVEHRIVVML 1433          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7131.15108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JJL0_9PHAE3.680e-10351.02RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LC33_ECTSI8.510e-7641.48RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2Y0H0_9STRA4.340e-1938.51Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A812HU79_9DINO8.900e-630.93RngB protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A813AZ03_9DINO2.150e-531.82RngB protein n=1 Tax=Symbiodinium necroappetens Ta... [more]
A0A812SIK4_9DINO2.360e-531.82RngB protein n=1 Tax=Symbiodinium sp. CCMP2456 Tax... [more]
A0A1Q9EZ49_SYMMI5.200e-531.82RING finger protein B n=3 Tax=Symbiodinium TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 335..400
e-value: 1.1E-13
score: 52.4
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 351..394
e-value: 3.0E-10
score: 39.8
NoneNo IPR availablePANTHERPTHR14879:SF5E3 UBIQUITIN-PROTEIN LIGASE CBLAcoord: 337..399
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 337..399
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 352..396
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 354..389
score: 10.35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7131contigH-paniculata_contig7131:112..9944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7131.15108.1mRNA_H-paniculata_contig7131.15108.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7131 82..11413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7131.15108.1 ID=prot_H-paniculata_contig7131.15108.1|Name=mRNA_H-paniculata_contig7131.15108.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=401bp
MHWGVKDVGTLVLEDNLGNTYEFYTFQDEKVAERMLEKVQAFIREAREGG
LADGGENEIAEQIPLELEVLIDDSWLDEMACGLFLLVALVLMTCPYSEVV
EFDAESGAMALDRWNLYRCGIFRYSCALENVSKLEITESDVWIMSAHAFD
HMRKRKEFGLRMLFSLPQGRPGTGVIPSAPPPLANASLSANDSPALPLAI
VTASAAPAGGTSLGGGSFSRRGTGASTAARRWEDEQRSSLRARGVLRSCL
CFMRRFFICFGRGSGSCGRRPGGGGGNARVGCWWGGGHPVTRSAGNGGGL
MYLELGFGHKSQDDRKLRNPVGLVNDLLLRFSRFGSDTQAGVEHKPERST
EGSCCVCFRRRARVVTFPCMHMAVCPQCSENLSACPLCRGSINERHTVFL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING