prot_H-paniculata_contig712.15094.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig712.15094.1
Unique Nameprot_H-paniculata_contig712.15094.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1269
Homology
BLAST of mRNA_H-paniculata_contig712.15094.1 vs. uniprot
Match: D7G0V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V5_ECTSI)

HSP 1 Score: 745 bits (1923), Expect = 2.120e-247
Identity = 550/1287 (42.74%), Postives = 693/1287 (53.85%), Query Frame = 0
Query:   27 MARLVDHLLRGRVQPSAKHEAAAALSCVRAFVRACRP---TPQKEGGTETAQHRKERRSDDASGNAPRPSPPGG-TLLKLAQRGVQLHNNARKLPQLKARSGTGGGGEWKAAAVAYLRAVAASLVSLGSTTSPKDCANLCRLFSKAGDMLVEEAGDDIRASCSRSSSAFRRALEMFDDAEEFFGRLPESFY--GNERL---SLSVEDLIMAMHKASTRRIEVLSRTTGNVNQMVYGYEQQLKMLKRCSPAGLSLSIAMHAASIGEETFKKGDYRGSARLLRTSLLLLGGDLGE-PVSKSS---RTHLG-LRRTTLFSLAYCYGQSEDHRKAVQCMKQLEDEERHVLQADADTA--QLLFAKCKVLADAGDLAGAQAAAESLALVEPKNLPLDVGTAASEDPTAAV-----VSDLELVAARMVASKDNCSDKSLALFSKIAARQFHNGIFRG---AIAARISLLDGLAKAVRMRSEGCGVGERKLTETEHDEGATKRIEIET-AVQKAKKTADELVADHCKGGSCLMSSSQVHSETLEILVALAEFFQDCEEWDACAAWCERAILLATS-SKTNGPY-------GSALRGEEATHAGNMECRMEDFASSRQTLDKALALCPSNTRAREVAFWSTARDPNCDESSLSARLSALLGPRSSFDSEGRREFLASCAALVAGTIVARAGGQADAKRTVAHRIWDDRLMMVQERWLETIL-ESPSRTQQQSEVDER----------NDAAGDDDGCIRQASTSDGG--CGVI---PMDVAGELTAADRAESAGVLDELLVTPSRKRRREGGAQRSPKPGAVQIVASMVDRALQPQATQTVVEAQRETHAVSTVGESFLPGNTGNEKWMVADRSVLSRVLLSVDKALASAPLLEINLRDEADIHFLAQACWNLAVRCCGPKCDLPWALELHVSSGGGLGGDEMMPKVQETSDGDANENDHIRTELLELARAFFRASRQWNELRSEANSPESLLSRQNCMMLGVAAALELSDSKEKHNSESTARGNNVDQGSSFVRDTTDDERSRRLTLERCRKDLEIALGLNRLLSEVQHESAREIRSVLLVAEISVLSRLRDAAAVRSLVSGRESDLMCCSTKLLHYCIQLVNDTLEDPRSTAGLSRICIRRCAEEDPVDVSLLGGLYRRLLLCALNREDALLVVDEFSVRVKELEEGPRMPPPDVDYMAAKCYNIGLQLLEMSRATEAERFVGKALGLVRIGASKAFSARWAEAMHRVYRAALLGKGND-NGTGPGQLGGPTPDGLRS-GGAAFHSTGLFPMP 1262
            MARLVD LLRGR Q SA+HEAA A+S +RAFV A RP     + E  +   + R   RS  + G+ P  + P   TLLKLAQ                                                                                         ALEMF+DAE +F RLP SFY  G ++    SLS EDLIMA+HKAS+RRIEVLSRTTGNV+QMV GYE QLK+L   SPAGL +S A+HAAS+GEE FKKGD RG++R+LR +L  +GGD+G  P + +S     H G LRRT LFSLA+C  +S DH  A++ +K LE+      +        + LFAKCKVL DAGDL GA  AA++L  + P         A S  PTA V        L+L AAR+++S+D+CSD+SL LF+ IA+R      F G   A+ AR++LL GLA A R+RSEG G G     + +H++G+      E  AV +A+KTAD+++A+    G   +++ QV S  LE+LV   EFFQ  ++W++CA WC RAI LAT  SK + P         S L     T  G MECR  DFASS QTLD+ALALCP+  RAREVAFWS ARDPN DESSLSARLSAL GPR+      RRE+LA+C  LVAG   A        +    +  +D R+ MVQER LE +L E+P+ T  + E +            ++A  D DG    A     G  CG I   PM V GE                   P  +     G    P P AVQ+VASMVD AL     Q V + + + H  S    +                SVLSRVLLSVDK L  A  L I   D+ DI +L+  CWNLAVRCCG  CDLPW  ++  S+           K Q + D +A   +  R +LL LA AFF+ASR W E+ S+AN  ++LL RQNC++L +AA LEL DSK             VD G+     TT     RR  LER RK++E+A GLNRLLS+V+ + A E+RS+LLVAE+SVL RL D  AVRSLV+ RE D + CST LL YC+Q                                                ++ALLVVDEF+ + ++L+EGP MP  DVDY++AKCYN+GLQLLEMSR  EAERFVGKALGL+++G+S AF  RW EA+H+VYR  L  KG+    T P   GG       + GG AF STGLFPMP
Sbjct:    1 MARLVDSLLRGRAQASARHEAATAVSDIRAFVHAWRPDAPASKDEQDSTEPEGRGRTRSHGSGGSDPSMNRPSADTLLKLAQ-----------------------------------------------------------------------------------------ALEMFEDAEGYFSRLPGSFYATGWQKFGMPSLSAEDLIMAVHKASSRRIEVLSRTTGNVDQMVEGYEWQLKILTARSPAGLRMSTAVHAASVGEERFKKGDCRGASRILRLALQAIGGDVGSGPTATASDPQAAHTGKLRRTILFSLAHCCSKSGDHNNAIKFIKHLEEGGGWCAKGGGTDPPPKFLFAKCKVLTDAGDLTGAYTAAKALVALTP---------APSGKPTAGVGDGEPEDGLDLAAARLISSRDDCSDRSLDLFAAIASR------FAGTPKAVDARVALLSGLAMAARLRSEGGGAGWWS-PDGQHEKGSAAAATAENEAVGRAEKTADDMIAEI--SGCNNVATYQVDS-ALEVLVTFTEFFQGRDKWESCARWCGRAINLATGDSKGSTPKRVPHADKASLLLASLLTLRGEMECRTGDFASSSQTLDQALALCPTYGRAREVAFWSAARDPNRDESSLSARLSALSGPRARLTPGARREYLATCVGLVAGVRKATQDPDQRGESDAGNARYDSRVTMVQERLLEALLVEAPATTDMEKEAEPTQAQPSTSSTPHEAGSDKDGPAGSAPVGGAGEDCGGIAPTPMVVEGEGDEDVGDVPVARTGADATPPGNRSAGSNGNGTDPVPTAVQVVASMVDSAL-----QWVSKEEIKVHRGSAEDAA----------------SVLSRVLLSVDKTLRRAGSLGIGPLDDPDIRYLSHGCWNLAVRCCGSNCDLPWGDKVGSSAS----------KDQMSVD-EATHTERKRNDLLVLAPAFFKASRNWAEIGSDANMEDALLRRQNCVVLSIAATLELYDSKP------------VD-GAPLANATTSSS-ERRDMLERSRKEVEVATGLNRLLSDVKPDMATEMRSILLVAEMSVLGRLGDFVAVRSLVASREPDFLRCSTNLLQYCLQ------------------------------------------------DEALLVVDEFTAKSRDLQEGPGMPSEDVDYVSAKCYNLGLQLLEMSRPGEAERFVGKALGLLKLGSSPAFVRRWEEAIHKVYRTTLQAKGDAATATNPIMAGGSGSQASTAIGGRAFLSTGLFPMP 1085          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig712.15094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0V5_ECTSI2.120e-24742.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 279..618

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig712contigH-paniculata_contig712:11793..30071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig712.15094.1mRNA_H-paniculata_contig712.15094.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig712 11719..31488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig712.15094.1 ID=prot_H-paniculata_contig712.15094.1|Name=mRNA_H-paniculata_contig712.15094.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1269bp
MSESGLSSASCSSAPTVEEVEEKAASMARLVDHLLRGRVQPSAKHEAAAA
LSCVRAFVRACRPTPQKEGGTETAQHRKERRSDDASGNAPRPSPPGGTLL
KLAQRGVQLHNNARKLPQLKARSGTGGGGEWKAAAVAYLRAVAASLVSLG
STTSPKDCANLCRLFSKAGDMLVEEAGDDIRASCSRSSSAFRRALEMFDD
AEEFFGRLPESFYGNERLSLSVEDLIMAMHKASTRRIEVLSRTTGNVNQM
VYGYEQQLKMLKRCSPAGLSLSIAMHAASIGEETFKKGDYRGSARLLRTS
LLLLGGDLGEPVSKSSRTHLGLRRTTLFSLAYCYGQSEDHRKAVQCMKQL
EDEERHVLQADADTAQLLFAKCKVLADAGDLAGAQAAAESLALVEPKNLP
LDVGTAASEDPTAAVVSDLELVAARMVASKDNCSDKSLALFSKIAARQFH
NGIFRGAIAARISLLDGLAKAVRMRSEGCGVGERKLTETEHDEGATKRIE
IETAVQKAKKTADELVADHCKGGSCLMSSSQVHSETLEILVALAEFFQDC
EEWDACAAWCERAILLATSSKTNGPYGSALRGEEATHAGNMECRMEDFAS
SRQTLDKALALCPSNTRAREVAFWSTARDPNCDESSLSARLSALLGPRSS
FDSEGRREFLASCAALVAGTIVARAGGQADAKRTVAHRIWDDRLMMVQER
WLETILESPSRTQQQSEVDERNDAAGDDDGCIRQASTSDGGCGVIPMDVA
GELTAADRAESAGVLDELLVTPSRKRRREGGAQRSPKPGAVQIVASMVDR
ALQPQATQTVVEAQRETHAVSTVGESFLPGNTGNEKWMVADRSVLSRVLL
SVDKALASAPLLEINLRDEADIHFLAQACWNLAVRCCGPKCDLPWALELH
VSSGGGLGGDEMMPKVQETSDGDANENDHIRTELLELARAFFRASRQWNE
LRSEANSPESLLSRQNCMMLGVAAALELSDSKEKHNSESTARGNNVDQGS
SFVRDTTDDERSRRLTLERCRKDLEIALGLNRLLSEVQHESAREIRSVLL
VAEISVLSRLRDAAAVRSLVSGRESDLMCCSTKLLHYCIQLVNDTLEDPR
STAGLSRICIRRCAEEDPVDVSLLGGLYRRLLLCALNREDALLVVDEFSV
RVKELEEGPRMPPPDVDYMAAKCYNIGLQLLEMSRATEAERFVGKALGLV
RIGASKAFSARWAEAMHRVYRAALLGKGNDNGTGPGQLGGPTPDGLRSGG
AAFHSTGLFPMPASATHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf