prot_H-paniculata_contig7117.15090.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7117.15090.1
Unique Nameprot_H-paniculata_contig7117.15090.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length233
Homology
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BLAST of mRNA_H-paniculata_contig7117.15090.1 vs. uniprot
Match: D7FY24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY24_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 7.160e-16
Identity = 57/171 (33.33%), Postives = 71/171 (41.52%), Query Frame = 0 
Query:    7 AIERDLLVATRAIRVSDTVKADVIITAGAGTCAFQIHVNFSHAHVSEAVERADGLAFGFEKCYVFLVRPNTDALQNFQASLQLSPTCHARPLLVASEDLIVPEMKRVSAGAVTSATNVNRREYYRQVNEGLRQEPPHRLILAKLLRELGFPRYEQEADLLLDAFGSIRGVV 177
            A+ER L    R  RVS T+KADV+I+ G GTCAFQ+H NFSH HV+EA+                                                                              ++ LR + PHR ILA+LLR LG P + QEADLLLDAFGSI  ++
Sbjct:    4 ALERGLRAVARGTRVSGTIKADVVISTGGGTCAFQLHTNFSHGHVAEAL------------------------------------------------------------------------------HQKLRLDHPHRGILAELLRGLGVPDWRQEADLLLDAFGSISTLI 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7117.15090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY24_ECTSI7.160e-1633.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7117contigH-paniculata_contig7117:2883..5673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7117.15090.1mRNA_H-paniculata_contig7117.15090.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7117 2883..5673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7117.15090.1 ID=prot_H-paniculata_contig7117.15090.1|Name=mRNA_H-paniculata_contig7117.15090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
MRLPGTAIERDLLVATRAIRVSDTVKADVIITAGAGTCAFQIHVNFSHAH
VSEAVERADGLAFGFEKCYVFLVRPNTDALQNFQASLQLSPTCHARPLLV
ASEDLIVPEMKRVSAGAVTSATNVNRREYYRQVNEGLRQEPPHRLILAKL
LRELGFPRYEQEADLLLDAFGSIRGVVLQPLSSLLENCPVAGETARTLHA
FFGENNDLPLPCSMCPGELDGCRILRSPSNRG*
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