prot_H-paniculata_contig7110.15083.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7110.15083.1
Unique Nameprot_H-paniculata_contig7110.15083.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1647
Homology
BLAST of mRNA_H-paniculata_contig7110.15083.1 vs. uniprot
Match: D8LHA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA8_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 5.750e-48
Identity = 111/182 (60.99%), Postives = 133/182 (73.08%), Query Frame = 0
Query:  465 AVAAKVNEAEARKWEECVEGGEAYYVTAMLASVVRSLAEGPKTEVELDQSVRKDMDTGRAAAGLAAADWTETHMVNVRLVVDVLVALGLVKTDFCTEQGCVVGWPRDVHPPSAAHNGTPAPCFCASVMCRAVAQNTRTLATPTTLSSLVALTASLSAGTTLPPQEMQGMVAVDPFHLGMPWN 646
            A A +     AR WEECV+ GEA+ VTAMLASVVRSLAEGPKTE ELDQSVR DMD GRAAAGL  A+W+E+HMVNVRLVVDVL+ALGLVK+D+ T +    GWP DVHPPS +H G PAPCFC+SVM RA+A++T+ +ATP   ++L +LTAS                 +DPF LG+PWN
Sbjct:  293 AGAVQAKAEVARTWEECVDEGEAF-VTAMLASVVRSLAEGPKTETELDQSVRSDMDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSA-GWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTK-MATPAVPAALPSLTASFP---------------IDPFQLGIPWN 456          
BLAST of mRNA_H-paniculata_contig7110.15083.1 vs. uniprot
Match: A0A6H5KYA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA3_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.480e-48
Identity = 110/174 (63.22%), Postives = 130/174 (74.71%), Query Frame = 0
Query:  473 AEARKWEECVEGGEAYYVTAMLASVVRSLAEGPKTEVELDQSVRKDMDTGRAAAGLAAADWTETHMVNVRLVVDVLVALGLVKTDFCTEQGCVVGWPRDVHPPSAAHNGTPAPCFCASVMCRAVAQNTRTLATPTTLSSLVALTASLSAGTTLPPQEMQGMVAVDPFHLGMPWN 646
            A AR WEECV+ GEA+ VTAMLASVVRSLAEGPKTE ELDQSVR DMD GRAAAGL  A+W+E+HMVNVRLVVDVL+ALGLVK+D+ T +    GWP DVHPPS +H G PAPCFC+SVM RA+A++T+ +ATP   + L +LTAS                 +DPF LG+PWN
Sbjct:  457 AVARTWEECVDEGEAF-VTAMLASVVRSLAEGPKTETELDQSVRSDMDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSA-GWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTK-MATPAVPAVLPSLTASFP---------------IDPFQLGIPWN 612          
BLAST of mRNA_H-paniculata_contig7110.15083.1 vs. uniprot
Match: A0A6H5LFU5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFU5_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 3.320e-33
Identity = 112/286 (39.16%), Postives = 139/286 (48.60%), Query Frame = 0
Query: 1446 NLSDEAKILAEEGLFDLIEDAWGSETAEKCYRHVEEEVLPHLPLDARAFQLALEGRIEPGGELEMNYGKAAVETLYLWLNLKSDSWAKWRQEHDRRGATSIE--------------------------------------------------------------------------------NAAAAAIAAAHSQYPRRPSVSGSSLAGXXXXXKGAGGNVGVQXXXXXXXXXXXXXXXXXXXXXXASGG-------VKQIRYRLEGAQDRVLANWKEPARRAVQV 1644
            +LSDEAK LAEEGLFDL+ DAWG E + + + +VEEEV P LP+D RAF LA+EGR+EPGGE+E  YGKAAVE L+LWL+LKSD+W +WR+  DRRGA                                                                                    N + A+  AA S+  +   VS    AG     KGA                  XXXXXXXXXXXA+GG       +K++RYRL+G  DRVLANW+EPAR+A+QV
Sbjct:  984 HLSDEAKALAEEGLFDLVRDAWGGEASARAHSYVEEEVAPSLPVDGRAFALAVEGRLEPGGEVETTYGKAAVEMLHLWLHLKSDNWVRWREMQDRRGAVDTSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTPARKTSSVTRGGNRSRASAGAAGSKSGKNGGVSSKQKAGFYSGEKGA------------------XXXXXXXXXXXAAGGAIVVATRIKRVRYRLDGEHDRVLANWEEPARKALQV 1251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7110.15083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHA8_ECTSI5.750e-4860.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYA3_9PHAE6.480e-4863.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LFU5_9PHAE3.320e-3339.16Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..451

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7110contigH-paniculata_contig7110:1398..11815 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7110.15083.1mRNA_H-paniculata_contig7110.15083.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7110 1398..11815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7110.15083.1 ID=prot_H-paniculata_contig7110.15083.1|Name=mRNA_H-paniculata_contig7110.15083.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1647bp
GVEDAAAEGKTRGESLEDIQSRMQQVATLSAKVNNAMHETEVKGDTTPRG
RMGTGAVAAAAAAGCEASPAPGTRDTGSRRQRTPTARLQQHLTEVRRTSR
SRQTPPTPEQQQPQATTSPRSAEPPAATPRITTRGVARGNSAAGRVESAS
VTKGPGGSTAGTGRVGGATGSAGGAGAGRNGKKRKRPTDGGDKSSHGGGR
GGDGKLPEDGAAAMPPPAGVTPPPPSAPTQGSNASVSAMDVAPEDGERKA
VAQGGPASTVGLSVLTAPAAPVPPAQSPLPLLLQPPDASGGTSAMATAAI
PAPAPAAALPHPSAIEGPLEAPVSTAATVTHQAAVSATLSPCGAGVSSAS
TRAISSGASTPTAGIAREMRFVGGRREMQVAPAAAEALGSSGAVGGGEAF
GAVSAAGVSRTGVSSTVLEEDGAAAEAAFRVAAAEAAAAEVEAAVESSRA
RARKREEAKADEAAAVAAKVNEAEARKWEECVEGGEAYYVTAMLASVVRS
LAEGPKTEVELDQSVRKDMDTGRAAAGLAAADWTETHMVNVRLVVDVLVA
LGLVKTDFCTEQGCVVGWPRDVHPPSAAHNGTPAPCFCASVMCRAVAQNT
RTLATPTTLSSLVALTASLSAGTTLPPQEMQGMVAVDPFHLGMPWNNNPP
TPGSTSSPSPSLPTLPPGSNAGTVLPPSQPGIASAGLPPAAPLASPPQNS
AAVGGGTGTVVGTNTPPYGVPGKLTPPPAAILTPMPSLPHGHGGGTGQGL
PVQQPATTTGGATASPGVVRPPTGNAMAVDGKMTQIGNGGAGDVSGASAV
GSGSGSGGGGGGGDSVAGVPTNAVEASGEDVIEQSPSPPQPQQSPGSQSA
ATQPLPTSPAFSQHHLHALSQGMLVEAGFEPVPGGMVSRGGGAPSPPPRL
LKPPPPPPPPPKPSVQPLPPVSAWGKLPGFKMDDDDDTPAKPLAAKSPAA
KPPIASPPAAKSPAAAATTTSAANTHHPVHRYHHHYHQPQQSQAQAQLQP
TNAVAESGQAAAAAVSASASASASATAAATAATAATASIAATRAVAIPPN
QGNHGVLPALAAATQPLPSRVTTRGSRVTGAAQGCASAAVGAGSPVGFVA
GAPASTGLTSVTTNAGWNVASGSAGVGGGVTPLSLPSPGSSTMSAVTTCS
PLSHVTGSQTGSQDGAYRPGQDRGQGQHDRCQGSQTSTTTHSNPGGAGLH
PTNNTLASATTSAGGNLHTPTGTPSPVPSSASMPHVFHQTTGVGEAAAVV
RGAAAGAVAGGARMEGVAREAFPVAGEGERTQALPPYRQQNTTQASVASP
VISSLSPMEALSTGTSATAASPLSAPGIFKAAIEATATTCGGTSAGGQAT
AAALAGRNKKANLYARFLQDPTGVAIPHSYPNAVDSEAGDHSHRQQKDGI
GTPASVVAAAGTAAMAVAAVGAGASMATGINMAGWEEVAPAGTSRNLSDE
AKILAEEGLFDLIEDAWGSETAEKCYRHVEEEVLPHLPLDARAFQLALEG
RIEPGGELEMNYGKAAVETLYLWLNLKSDSWAKWRQEHDRRGATSIENAA
AAAIAAAHSQYPRRPSVSGSSLAGGGGSSKGAGGNVGVQGGSGGGGGGGG
GGGGGKSGKKGASGGVKQIRYRLEGAQDRVLANWKEPARRAVQVTW*
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