prot_H-paniculata_contig71084.15078.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig71084.15078.1
Unique Nameprot_H-paniculata_contig71084.15078.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 69.3 bits (168), Expect = 6.260e-12
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0
Query:    1 MQGLIDDGAWTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAIQD 82
            ++ L D+G W+ V+ P N   V    +YK K+  DGKVE+YK RLVA G  Q++G  YQE  SP      ++M  +LAA Q+
Sbjct:  180 LKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQN 261          
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: UPI0008494023 (uncharacterized mitochondrial protein AtMg00810 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI0008494023)

HSP 1 Score: 68.2 bits (165), Expect = 1.520e-11
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 MQGLIDDGAWTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAIQD 82
            ++ L D+G W+ V+ P N   V    +YK K+  DGKVE+YK RLVA G  Q++G  YQ+  SP     +++M  +LAA Q+
Sbjct:    5 LKALEDNGTWSIVQLPSNCHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQKTFSPVVRQTTVRMFFALAATQN 86          
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: UPI000901DBC0 (uncharacterized protein LOC109176569 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000901DBC0)

HSP 1 Score: 65.1 bits (157), Expect = 2.390e-11
Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 0
Query:    2 QGLIDDGAWTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAI 80
            + L D G W  V  P  K V+    IY  K+G DGKV+  K RLVA G  QV G+ Y +  SP    AS++++LS+AAI
Sbjct:   78 EALQDSGTWELVPLPHGKFVIGCKWIYMVKVGPDGKVDHLKARLVAKGYIQVYGLDYTDTFSPVAKIASVRLLLSMAAI 156          
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: A0A060SUY4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SUY4_PYCCI)

HSP 1 Score: 67.4 bits (163), Expect = 3.050e-11
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   10 WTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAIQD 82
            + +VERP+N+ VV    +++ K G DG VE+YK RLVA G  QV+GI Y E  +P    ASI+ VL+LAA+ D
Sbjct:  962 YDEVERPQNRKVVGCKWVFRLKRGADGSVERYKARLVAQGFTQVEGIDYSEMFAPVSKFASIRTVLTLAALFD 1034          
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 65.9 bits (159), Expect = 1.070e-10
Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   10 WTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAIQD 82
            + +VERP+N+ VV    +++ K G DGK++KYK RLVA G  QV+G+ Y +  +P    ASI+M+L+ AA  D
Sbjct:  996 YDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHD 1068          
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: A0A540NMU0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NMU0_MALBA)

HSP 1 Score: 63.5 bits (153), Expect = 1.240e-10
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 0
Query:    2 QGLIDDGAWTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAI 80
            + L   G W  V  P+N+ V+ +  +YK K  +DGKV +YK RLVA G  Q  G+ Y E  SP     ++++VLSLAA+
Sbjct:   74 EALQKQGTWELVPVPQNRNVIGSKWVYKLKKDQDGKVSRYKARLVAQGFSQEHGLEYDETFSPVVRHTTVRLVLSLAAM 152          
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 65.5 bits (158), Expect = 1.390e-10
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 0
Query:    1 MQGLIDDGAWTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAIQD 82
            M   +    + +VE PKN+ VV +  +++ K G +GK+EKYK RLVA G  QVKGI Y E  +P     SI+ +LSLAA  D
Sbjct:   17 MLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIRTLLSLAAKLD 98          
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: UPI00090104FD (uncharacterized protein LOC104779870 isoform X1 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00090104FD)

HSP 1 Score: 65.1 bits (157), Expect = 1.920e-10
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 0
Query:    4 LIDDGAWTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAIQD 82
            LI  G W  V RPKN  ++ +M +YK K   +G++ +YK RLVA+GN Q+ G+   E  SP    A+I+ VL +A   D
Sbjct:  431 LIKMGTWCLVPRPKNTNIIRSMWLYKHKFDSNGRLSRYKARLVANGNSQLPGVDCDETFSPVVKPATIRAVLHVATAYD 509          
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: A0A2Z6M6S6_TRISU (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6M6S6_TRISU)

HSP 1 Score: 64.7 bits (156), Expect = 2.710e-10
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 0
Query:    1 MQGLIDDGAWTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAIQ 81
            M  L   G W  V  P  K +V    +Y  K+G DGK++++K RLVA G  Q+ G+ Y +  SP    AS+++ LS+AAIQ
Sbjct:  711 MCALQSSGTWELVPLPPGKSLVGCRWVYTVKVGPDGKIDRFKARLVAKGYTQIFGLDYSDTFSPVAKMASVRLFLSIAAIQ 791          
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Match: A0A151T5R4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5R4_CAJCA)

HSP 1 Score: 64.7 bits (156), Expect = 2.720e-10
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0
Query:    1 MQGLIDDGAWTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQVKGIHYQEASSPAPAAASIKMVLSLAAIQD 82
            M  L ++  W  V+ PK K VV    I+  K+G DGK+++YK RLVA G  Q  GI Y+E  +P     SI++++SLAA  D
Sbjct:  872 MAALEENKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVAQGYTQTHGIDYEETFAPVAKLNSIRILISLAANLD 953          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig71084.15078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC6.260e-1242.68Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
UPI00084940231.520e-1141.46uncharacterized mitochondrial protein AtMg00810 n=... [more]
UPI000901DBC02.390e-1144.30uncharacterized protein LOC109176569 n=1 Tax=Ipomo... [more]
A0A060SUY4_PYCCI3.050e-1149.32Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A060SSE0_PYCCI1.070e-1045.21Integrase catalytic domain-containing protein n=1 ... [more]
A0A540NMU0_MALBA1.240e-1041.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2R6NNP3_9APHY1.390e-1045.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00090104FD1.920e-1041.77uncharacterized protein LOC104779870 isoform X1 n=... [more]
A0A2Z6M6S6_TRISU2.710e-1040.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151T5R4_CAJCA2.720e-1042.68Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..81
e-value: 7.2E-14
score: 52.0
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 8..81
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 8..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig71084contigH-paniculata_contig71084:1..246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig71084.15078.1mRNA_H-paniculata_contig71084.15078.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig71084 1..246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig71084.15078.1 ID=prot_H-paniculata_contig71084.15078.1|Name=mRNA_H-paniculata_contig71084.15078.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
MQGLIDDGAWTQVERPKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGN
RQVKGIHYQEASSPAPAAASIKMVLSLAAIQD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like