prot_H-paniculata_contig71080.15077.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig71080.15077.1
Unique Nameprot_H-paniculata_contig71080.15077.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 105 bits (261), Expect = 2.980e-24
Identity = 44/91 (48.35%), Postives = 59/91 (64.84%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRNLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRFDK 91
            ++VY LN  PT+   G TP+E WHG TP ++HL+VFGC  Y +    +R  LD K+  G+FLGY   S  YRIY P  K + +SRNV+FD+
Sbjct:  590 TSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680          
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: A0A4Y2LMC7_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=39 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2LMC7_ARAVE)

HSP 1 Score: 97.4 bits (241), Expect = 1.510e-21
Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRNLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRF 89
            +A Y  NR PT+P   +TPYE W    P L H+RVFGC AYV  Q Q+R  LD KA  G+FLGYD  S  YRIY+  NK + +SR V+F
Sbjct:  678 TATYLQNRLPTKPKR-KTPYELWTNLKPNLSHIRVFGCKAYVYIQKQKRGKLDSKAVEGIFLGYDYRSKGYRIYLGDNK-IMISRTVKF 764          
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: A0A151RQW4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RQW4_CAJCA)

HSP 1 Score: 95.9 bits (237), Expect = 2.330e-21
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRNLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRFDKE 92
            +AVY LNR PT+    +TP E W G  P + HLR+FGC AY    +Q R+ LDDK    VF+GY  +S +Y++Y P+   V +SR+V FD++
Sbjct:   28 TAVYILNRCPTKSVLNKTPEEAWSGRRPSIRHLRIFGCIAYAHVPNQLRKKLDDKGERCVFIGYSSNSKAYKLYNPETNKVIISRDVTFDEK 119          
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: A0A1R3HQR7_COCAP (Integrase catalytic domain-containing protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3HQR7_COCAP)

HSP 1 Score: 96.7 bits (239), Expect = 2.790e-21
Identity = 44/91 (48.35%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRNLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRFDK 91
            +AVY LNR PT+     TPYE W G  P + HL+VFGC  Y    + +R  LD+KA  GVF+GY  +   YRIY P    V LSR+V+FD+
Sbjct:  427 TAVYLLNRLPTKALKNLTPYEGWSGAKPSVTHLKVFGCVCYTWIPNVKRGKLDEKAQIGVFVGYSIEVKGYRIYNPTTNKVYLSRDVKFDE 517          
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 96.7 bits (239), Expect = 2.800e-21
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRNLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRF 89
            +A Y +NR+P+R    RTPYE WHGE P+L HLRVFGC+A+     Q+R+ LD K+   +F+GY +D   YR+  P  K V  SR+V F
Sbjct:  589 TACYLINRSPSRALGERTPYEVWHGEKPDLSHLRVFGCSAWAHIPKQRRKKLDPKSERLIFIGYPEDRRGYRLLDPVTKRVTNSRDVHF 677          
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: A0A177U095_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U095_9BASI)

HSP 1 Score: 96.3 bits (238), Expect = 3.800e-21
Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRN-LDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRFDKE 92
            +A Y  N  P+RP  G+TP+E W+G  P +DHLR+FGC A+V+   + R + L  +A  GVF+GYDK S  YR++ P   ++ +SRNV F ++
Sbjct:  350 TAAYLRNHRPSRPLGGKTPFELWYGTPPRIDHLRIFGCLAFVMLPDKAREHSLSARARVGVFIGYDKYSKGYRVHFPDTGALAISRNVDFHED 442          
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: A0A8J6BLJ9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J6BLJ9_ZIZPA)

HSP 1 Score: 95.1 bits (235), Expect = 4.580e-21
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRNLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRFDKE 92
            +AVY LNRAPT+   G TP+E W G+ P + HLR FGC  +V   +   R LDD++ + +F+GY+K S +YR Y P  + V +SR+V FD++
Sbjct:   18 TAVYVLNRAPTKGVVGMTPFEAWFGKKPAVHHLRTFGCMVHVKNAAPHLRKLDDRSTSMIFIGYEKGSKAYRAYDPVTRRVHVSRDVIFDEQ 109          
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: A0A5H2XRH9_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XRH9_PRUDU)

HSP 1 Score: 93.2 bits (230), Expect = 4.860e-21
Identity = 40/94 (42.55%), Postives = 55/94 (58.51%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRNLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRFDKEDF 94
            +AVY LNR PT+    +TP E W    P   HL+VFGC  YV    ++R  L++K   G+FLGY   S  YR+Y P+ K   +S++V FD+  F
Sbjct:   35 TAVYLLNRCPTKALQNKTPIEAWSNIKPSAKHLKVFGCIFYVHIPKEKRHQLEEKYEVGIFLGYSSQSKGYRVYNPRPKKFMISQDVEFDESTF 128          
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: A0A151SW32_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SW32_CAJCA)

HSP 1 Score: 95.5 bits (236), Expect = 7.030e-21
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRNLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRFDKE 92
            +AVY LNR PT+    +TP E W G  P + HL++FGC AY     Q R+ LDDK    +F+GY  +S +Y++Y P  K V +SR+V FD+E
Sbjct:  628 TAVYILNRCPTKSVCDKTPEEAWSGRKPSIRHLKIFGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDEE 719          
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Match: Q8LSS4_ORYSJ (Putative gag/pol polyprotein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q8LSS4_ORYSJ)

HSP 1 Score: 95.5 bits (236), Expect = 7.100e-21
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 0
Query:    1 SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRRNLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRFDK 91
            +AVY LNR+PT+  +GRTPYE WHG  P + HLRVFGC A+   +      LDD++  GVF+GY + S +YRI  P+ + V+ +R+V FD+
Sbjct:  608 TAVYILNRSPTKALDGRTPYEAWHGRKPAVSHLRVFGCLAFAK-ELGHIGKLDDRSTPGVFIGYAEGSKTYRILDPETQRVRTARDVVFDE 697          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig71080.15077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151T355_CAJCA2.980e-2448.35Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y2LMC7_ARAVE1.510e-2152.81Retrovirus-related Pol polyprotein from transposon... [more]
A0A151RQW4_CAJCA2.330e-2145.65Retrovirus-related Pol polyprotein from transposon... [more]
A0A1R3HQR7_COCAP2.790e-2148.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5GGZ1_9HEMI2.800e-2148.31Integrase catalytic domain-containing protein (Fra... [more]
A0A177U095_9BASI3.800e-2144.09Integrase catalytic domain-containing protein n=2 ... [more]
A0A8J6BLJ9_ZIZPA4.580e-2145.65Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A5H2XRH9_PRUDU4.860e-2142.55Transposable element protein (Fragment) n=1 Tax=Pr... [more]
A0A151SW32_CAJCA7.030e-2145.65Retrovirus-related Pol polyprotein from transposon... [more]
Q8LSS4_ORYSJ7.100e-2148.35Putative gag/pol polyprotein n=1 Tax=Oryza sativa ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 2..93
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig71080contigH-paniculata_contig71080:8..295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig71080.15077.1mRNA_H-paniculata_contig71080.15077.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig71080 8..295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig71080.15077.1 ID=prot_H-paniculata_contig71080.15077.1|Name=mRNA_H-paniculata_contig71080.15077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
SAVYCLNRAPTRPHNGRTPYEKWHGETPELDHLRVFGCTAYVVFQSQQRR
NLDDKAWAGVFLGYDKDSPSYRIYIPKNKSVQLSRNVRFDKEDFVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like