prot_H-paniculata_contig7101.15067.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig7101.15067.1
Unique Name	prot_H-paniculata_contig7101.15067.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	158

Homology

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: A0A6H5KMU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU1_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 1.630e-96
Identity = 142/160 (88.75%), Postives = 151/160 (94.38%), Query Frame = 0

Query:    1 VVVGN--KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDRWVRA 158
            V  GN  +VVFYD DGGMERTFDYSSDPSCREFTTA+FNP GDAVVLGNYDSFHVFAH+HR GTWEEAG+R+VENMYTVT+LGWRADGSRLAVGSLCG+VDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEI +VNIYQDR+V A
Sbjct:  175 VAAGNDGQVVFYDADGGMERTFDYSSDPSCREFTTAAFNPTGDAVVLGNYDSFHVFAHSHRAGTWEEAGVRNVENMYTVTSLGWRADGSRLAVGSLCGSVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEILRVNIYQDRYVVA 334

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: D8LUB7_ECTSI (Intraflagellar transport protein 172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB7_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 6.690e-89
Identity = 141/156 (90.38%), Postives = 149/156 (95.51%), Query Frame = 0

Query:    1 VVVGN--KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDR 154
            V  GN  +VVFYD DGGMERTFDYSSDPSCREFTTA+FNP GDAVVLGNYDSFHVFAH+HR GTWEEAG+R+VENMYTVTALGWRADGSRLAVGSLCG+VDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEI++VNIYQDR
Sbjct:  216 VAAGNDGQVVFYDADGGMERTFDYSSDPSCREFTTAAFNPTGDAVVLGNYDSFHVFAHSHRAGTWEEAGVRNVENMYTVTALGWRADGSRLAVGSLCGSVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEISRVNIYQDR 371

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: A0A835YVD3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD3_9STRA)

HSP 1 Score: 254 bits (648), Expect = 1.290e-77
Identity = 116/160 (72.50%), Postives = 141/160 (88.12%), Query Frame = 0

Query:    1 VVVGN--KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDRWVRA 158
            V  GN  +VVFY +DGG+ERTFDYS+ P C+EF+ A+FNP GDAVV+GN++SF+V+AHNHR G WEE GI+ VENMYTVT+LGW+ADGSRLAVG+LCG VDVYDACVKR+RY+G+FE TYVSLSQVIVKRL +G+RIVLKSHF CEI K+NI++DR+V A
Sbjct:  215 VAAGNDCQVVFYGVDGGLERTFDYSNSPKCKEFSAAAFNPSGDAVVVGNFNSFYVYAHNHRAGLWEEVGIKEVENMYTVTSLGWKADGSRLAVGTLCGVVDVYDACVKRSRYRGKFEFTYVSLSQVIVKRLGTGARIVLKSHFGCEILKINIFKDRYVAA 374

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: A0A835Z5T0_9STRA (Intraflagellar transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5T0_9STRA)

HSP 1 Score: 254 bits (648), Expect = 2.660e-75
Identity = 116/160 (72.50%), Postives = 141/160 (88.12%), Query Frame = 0

Query:    1 VVVGN--KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDRWVRA 158
            V  GN  +VVFY +DGG+ERTFDYS+ P C+EF+ A+FNP GDAVV+GN++SF+V+AHNHR G WEE GI+ VENMYTVT+LGW+ADGSRLAVG+LCG VDVYDACVKR+RY+G+FE TYVSLSQVIVKRL +G+RIVLKSHF CEI K+NI++DR+V A
Sbjct:  119 VAAGNDCQVVFYGVDGGLERTFDYSNSPKCKEFSAAAFNPSGDAVVVGNFNSFYVYAHNHRAGLWEEVGIKEVENMYTVTSLGWKADGSRLAVGTLCGVVDVYDACVKRSRYRGKFEFTYVSLSQVIVKRLGTGARIVLKSHFGCEILKINIFKDRYVAA 278

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: A0A812YQZ0_SYMMI (IFT172 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YQZ0_SYMMI)

HSP 1 Score: 206 bits (524), Expect = 2.590e-63
Identity = 100/160 (62.50%), Postives = 124/160 (77.50%), Query Frame = 0

Query:    1 VVVGN--KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDRWVRA 158
            VV GN  ++ FYD DGG E TFD+S+DPSCREFT A  NP GDA+VLGNY+SF+V+A N     WEE GI  VENMY+VTAL W++DG +LAVG+LCG VD+YD C+KRT YKG FELTYVS SQVIV+ + S  RIV++S +  EI+K NIY++R+V A
Sbjct:   37 VVAGNDRQITFYDEDGGEEGTFDHSNDPSCREFTAAVANPSGDAIVLGNYNSFYVYARNKDTMGWEEKGITRVENMYSVTALSWKSDGGKLAVGTLCGIVDLYDVCLKRTMYKGGFELTYVSHSQVIVRHVESNVRIVVRSQYGFEISKTNIYKNRYVVA 196

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: A0A7S2W0W8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0W8_9STRA)

HSP 1 Score: 218 bits (556), Expect = 6.400e-63
Identity = 101/160 (63.12%), Postives = 130/160 (81.25%), Query Frame = 0

Query:    1 VVVGN--KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDRWVRA 158
            VV GN  +V+FYD DGG ERTFDYS+DP CREFT A  NP G+ V+LGN+DS +V++ N    +WEE G++ V N+Y+VTALGW+ DG R+AVGS+CG +D+YDAC++R+RYKG++E  YVSLSQVIVKRLS+GSRIVLKS +  EI K+NI+QDR+V A
Sbjct:  207 VVAGNDSQVIFYDSDGGQERTFDYSNDPKCREFTKAVVNPTGETVMLGNFDSLYVYSLNKSTESWEEVGVKQVPNLYSVTALGWKGDGGRVAVGSVCGQLDLYDACLRRSRYKGKYEFIYVSLSQVIVKRLSNGSRIVLKSLYGFEIVKINIFQDRYVVA 366

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: A0A8K1FJC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC7_PYTOL)

HSP 1 Score: 218 bits (555), Expect = 8.740e-63
Identity = 97/158 (61.39%), Postives = 132/158 (83.54%), Query Frame = 0

Query:    1 VVVGN--KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDRWV 156
            V  GN  +V FYD DGG+ RTFDYS+D  C EFTT+ FNP GDAVV+GN++SF+ F +  +  +WE  G++ +EN+++VTAL W++DGSRLAVGS+CGA+D+YDACV+R RYKG+FE TYVSLSQVIVKRL++G+R+V++S F CEITK+N++QDR++
Sbjct:  211 VAAGNDRRVAFYDRDGGLIRTFDYSNDEKCGEFTTSVFNPTGDAVVVGNFNSFYAFNYQLKTQSWESVGVKTIENLFSVTALAWKSDGSRLAVGSVCGALDLYDACVRRYRYKGKFEFTYVSLSQVIVKRLANGARVVVRSQFGCEITKLNVFQDRFL 368

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: A0A3R7AA36_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7AA36_9STRA)

HSP 1 Score: 218 bits (555), Expect = 8.950e-63
Identity = 98/160 (61.25%), Postives = 133/160 (83.12%), Query Frame = 0

Query:    1 VVVGN--KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDRWVRA 158
            V  GN  KV FYD DGGM R+FDY+SD  C EFTT+ FNP GD+ V+GN++SF+VF +  +  +WE  G++ VEN+Y+VT+LGW+ DGSRLAVGS+CGA+D+YDACV+R RYKG+FE TYVSLSQVIVKR+++G+R++++S F CEITK+N++QDR++ A
Sbjct: 1862 VAAGNDRKVTFYDKDGGMVRSFDYASDDKCGEFTTSVFNPTGDSCVVGNFNSFYVFNYLVKTDSWEAVGVKTVENLYSVTSLGWKFDGSRLAVGSVCGALDLYDACVRRYRYKGKFEFTYVSLSQVIVKRIATGARVIVRSSFGCEITKINVFQDRFLIA 2021

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: A0A7S0RE83_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RE83_9CHLO)

HSP 1 Score: 208 bits (530), Expect = 1.530e-62
Identity = 94/153 (61.44%), Postives = 127/153 (83.01%), Query Frame = 0

Query:    6 KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDRWVRA 158
            KVVFYD +GG+ + FDYS D + REFTTASFNP G+ VV+G+++ F+VF++N     WE+AG++ ++N+Y+V+A  W+ DGSRLAVGSLCG VD++DAC++R RYKG+FE TYVS SQVIVKRL++G+RIVLKSHF  EITK+NIY D+++ A
Sbjct:  220 KVVFYDAEGGVLQHFDYSGDEAVREFTTASFNPSGETVVVGSFNRFYVFSYNMHRSQWEQAGLKLIDNLYSVSAFAWKPDGSRLAVGSLCGGVDLFDACIRRHRYKGKFEFTYVSNSQVIVKRLANGTRIVLKSHFGYEITKINIYDDQYLVA 372

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BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Match: A0A5D6XF22_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XF22_9STRA)

HSP 1 Score: 216 bits (551), Expect = 3.020e-62
Identity = 98/158 (62.03%), Postives = 129/158 (81.65%), Query Frame = 0

Query:    1 VVVGN--KVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDSFHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDVYDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNIYQDRWV 156
            V  GN  KV FYD DGG+ RTFDYSSD  C EFT + FNP GD+VV+GN++SF+ +    +  +WE  G++ +EN+Y+VTAL W+ DGSRLAVGS+CGA+D+YDACV+R RYKG+FE TYVSLSQVIVKRLS+G+R+V++S F CEITK+N++QDR++
Sbjct:  226 VAAGNDRKVTFYDKDGGVLRTFDYSSDDKCGEFTCSVFNPTGDSVVVGNFNSFYTYNFQLKTESWEAVGVKTIENLYSVTALAWKCDGSRLAVGSVCGALDLYDACVRRYRYKGKFEFTYVSLSQVIVKRLSNGARVVVRSSFGCEITKINVFQDRFL 383

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig7101.15067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KMU1_9PHAE	1.630e-96	88.75	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D8LUB7_ECTSI	6.690e-89	90.38	Intraflagellar transport protein 172 n=1 Tax=Ectoc...	[more]
A0A835YVD3_9STRA	1.290e-77	72.50	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835Z5T0_9STRA	2.660e-75	72.50	Intraflagellar transport protein n=1 Tax=Tribonema...	[more]
A0A812YQZ0_SYMMI	2.590e-63	62.50	IFT172 protein (Fragment) n=1 Tax=Symbiodinium mic...	[more]
A0A7S2W0W8_9STRA	6.400e-63	63.13	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A8K1FJC7_PYTOL	8.740e-63	61.39	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A3R7AA36_9STRA	8.950e-63	61.25	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A7S0RE83_9CHLO	1.530e-62	61.44	Hypothetical protein (Fragment) n=1 Tax=Pyramimona...	[more]
A0A5D6XF22_9STRA	3.020e-62	62.03	Uncharacterized protein (Fragment) n=2 Tax=Pythiac...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 3..135 e-value: 1.5E-5 score: 26.7
None	No IPR available	PANTHER	PTHR15722	IFT140/172-RELATED	coord: 5..156
None	No IPR available	PANTHER	PTHR15722:SF2	INTRAFLAGELLAR TRANSPORT PROTEIN 172 HOMOLOG	coord: 5..156
IPR011044	Quinoprotein amine dehydrogenase, beta chain-like	SUPERFAMILY	50969	YVTN repeat-like/Quinoprotein amine dehydrogenase	coord: 5..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig7101	contig	H-paniculata_contig7101:110..957 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig7101.15067.1	mRNA_H-paniculata_contig7101.15067.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig7101 110..957 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig7101.15067.1 ID=prot_H-paniculata_contig7101.15067.1|Name=mRNA_H-paniculata_contig7101.15067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
VVVGNKVVFYDMDGGMERTFDYSSDPSCREFTTASFNPVGDAVVLGNYDS
FHVFAHNHRGGTWEEAGIRHVENMYTVTALGWRADGSRLAVGSLCGAVDV
YDACVKRTRYKGRFELTYVSLSQVIVKRLSSGSRIVLKSHFACEITKVNI
YQDRWVRA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR011044	Quino_amine_DH_bsu