prot_H-paniculata_contig70578.15018.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig70578.15018.1
Unique Nameprot_H-paniculata_contig70578.15018.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: A0A329SN38_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SN38_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.280e-8
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    7 WVADSGATAHMTPSNELMFDYETCS-NLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            W+ DSGATAHMTP    +F+YE    N+ VT+A+G+ + + G G + +   D   I    +  V H+PGLD  L S+
Sbjct:  263 WLIDSGATAHMTPHRNDLFEYEDLEENIEVTIADGKKIRVVGTGSVRLMGIDGKRI---KMVEVLHIPGLDRRLLSV 336          
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: A0A3M6VPY8_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPY8_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.300e-8
Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 0
Query:    7 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            W+ DSGATAHMTP  E +FDY+   +++ VT+A+G+ + + G G + +   D   I       V H+PGLD  L S+
Sbjct:  160 WLIDSGATAHMTPHREDLFDYKNLVTSIEVTIADGKKIRVVGTGSVRLTGIDGKRIRMLD---VLHIPGLDRRLLSV 233          
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: A0A225UGS0_9STRA (Integrase, catalytic core protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UGS0_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 9.480e-8
Identity = 29/77 (37.66%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    7 WVADSGATAHMTPSNELMFDYETCS-NLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            W+ DSGATAHMTP  + +F+Y   S +++VT+A+G+ + + G G + +   D   I    +  V ++PGLD  L S+
Sbjct:  245 WLIDSGATAHMTPHRDDLFEYSAMSKDMYVTIADGKKIRVAGTGSVRLTGIDAKSIR---MVEVLYIPGLDRRLLSV 318          
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: A0A2P4XNP3_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XNP3_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.020e-7
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    7 WVADSGATAHMTPSNELMFDYE-TCSNLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            W+ DSGAT+HMTP  E +FD E T S++ VT+A+G+ L + G G + + + +   I    +  V ++PGLD  L S+
Sbjct:  155 WLIDSGATSHMTPFREDLFDLEGTVSSIEVTIADGKKLRVAGQGTVRLTSLNGKHI---KMMEVLYIPGLDRRLLSV 228          
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: A0A225VGX0_9STRA (Integrase, catalytic core protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VGX0_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.640e-7
Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 0
Query:    7 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            W+ DSGATAHMTP  + ++++ T  ++++VT+A G+ + I G G + +   D   I    +  V HVPG D  L S+
Sbjct:  232 WLIDSGATAHMTPHRDDLYEFSTMPADMYVTIAAGKKIRIAGTGSVRLKGIDGKSIR---MVEVLHVPGFDRRLLSV 305          
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: A0A6A3X5U6_9STRA (CCHC-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3X5U6_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 8.800e-7
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    7 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            W+ DSGATAHMTP    +F+Y+   SN+ VT+A+G+ + + G G + +   D   I       V ++PGLD  L S+
Sbjct:  266 WLIDSGATAHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLTGIDGKRIKMID---VLYIPGLDRQLLSV 339          
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: A0A6A4BQ03_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BQ03_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 9.100e-7
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    7 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            W+ DSGATAHMTP    +F+Y+   SN+ VT+A+G+ + + G G + +   D   I       V ++PGLD  L S+
Sbjct:  242 WLIDSGATAHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLTGIDGKRIKMID---VLYIPGLDRQLLSV 315          
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: UPI0005F40DD4 (uncharacterized protein LOC105568084 n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F40DD4)

HSP 1 Score: 54.3 bits (129), Expect = 1.160e-6
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    2 GCEEFWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            G  + W+ADSGA+AH+T   E    +E+ S  F ++ANGE + I G G++ V     G+    +L +V  + G   NLFS+
Sbjct:  247 GTGDEWLADSGASAHVTGRREWFSQFESTSTKF-SLANGEQVSIHGRGEVEVECLVEGKWQSVTLKKVFFISGFKKNLFSI 326          
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: A0A4Y2F840_ARAVE (Uncharacterized protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2F840_ARAVE)

HSP 1 Score: 52.4 bits (124), Expect = 1.210e-6
Identity = 31/80 (38.75%), Postives = 43/80 (53.75%), Query Frame = 0
Query:    4 EEFWVADSGATAHMTPSNELMFDYETCSN-LFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            ++ W+ADSGA+ HMTP  E    YE+ S+   V + N ET+   G G + V     G+     LS V  VP +  NLFS+
Sbjct:    9 KDMWLADSGASVHMTPQKEYFLSYESFSSPKDVKIGNNETMFAFGLGTVKVRMLVSGKWENNHLSDVWFVPEVSRNLFSV 88          
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Match: A0A225V0K2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V0K2_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.650e-6
Identity = 27/77 (35.06%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    7 WVADSGATAHMTPSNELMFDYETC-SNLFVTVANGETLPIEGYGKMLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL 82
            W+ DSGAT HMTP  + +++Y T  ++++V +A+G+ + + G G + +   D   I    +  V HVPG D  L S+
Sbjct:  169 WLIDSGATVHMTPHRDDLYEYSTIPADMYVAIADGKKIRVAGTGSVRLKGIDGKSIR---MVEVLHVPGFDRRLLSV 242          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig70578.15018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A329SN38_9STRA5.280e-840.26Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A3M6VPY8_9STRA5.300e-840.26CCHC-type domain-containing protein n=1 Tax=Perono... [more]
A0A225UGS0_9STRA9.480e-837.66Integrase, catalytic core protein (Fragment) n=1 T... [more]
A0A2P4XNP3_9STRA1.020e-740.26Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A225VGX0_9STRA6.640e-737.66Integrase, catalytic core protein n=1 Tax=Phytopht... [more]
A0A6A3X5U6_9STRA8.800e-738.96CCHC-type domain-containing protein n=5 Tax=Phytop... [more]
A0A6A4BQ03_9STRA9.100e-738.96Retrovirus-related Pol polyprotein from transposon... [more]
UPI0005F40DD41.160e-637.04uncharacterized protein LOC105568084 n=1 Tax=Volle... [more]
A0A4Y2F840_ARAVE1.210e-638.75Uncharacterized protein n=1 Tax=Araneus ventricosu... [more]
A0A225V0K2_9STRA1.650e-635.06Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig70578contigH-paniculata_contig70578:231..476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig70578.15018.1mRNA_H-paniculata_contig70578.15018.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig70578 231..476 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig70578.15018.1 ID=prot_H-paniculata_contig70578.15018.1|Name=mRNA_H-paniculata_contig70578.15018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
DGCEEFWVADSGATAHMTPSNELMFDYETCSNLFVTVANGETLPIEGYGK
MLVWTKDRGEIHKFSLSRVAHVPGLDTNLFSL
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