prot_H-paniculata_contig705.15011.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig705.15011.1
Unique Nameprot_H-paniculata_contig705.15011.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length211
Homology
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: A0A2N9HUJ9_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HUJ9_FAGSY)

HSP 1 Score: 102 bits (253), Expect = 5.080e-22
Identity = 66/218 (30.28%), Postives = 112/218 (51.38%), Query Frame = 0
Query:    5 CKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSRILA--MSGAPALSKG-DEPKAPEE--------KEEATKFPCC-GLSMETHTDLDFGACLDTKRSVFGRVVLLAKGAISWHSRIQEITASGT 210
            CKL K+I GL QA + W + F + +T+FGF+++  + C+++K    E  + ++++VDD+L  + D       +  L   F++KD+    + +   + R+R    L L Q  Y+  + E F +E  S  +A    G    + G D  KA ++        K+    F     L +  +++ DF  C+D+++S FG + +LA GAISW S  Q I AS T
Sbjct:  101 CKLKKSISGLKQASRQWYLKFNNTITSFGFKENTVDWCIYLKESGSEF-IFLILYVDDILLASSDLGILHETKKFLSKNFEMKDMDKTTYVIGIEIFRNRSRGILGLSQKAYIERVLERFKMENCSASVAPIQKGRYQSNSGMDHWKAAKKVMRYLQGTKDFMLTFRRSDSLEVTGYSNSDFAGCIDSRKSTFGYLFMLAGGAISWESAKQTIIASST 317          
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 8.800e-21
Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 0
Query:    4 VCKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSRILAMSGAPALSKGDEPKAPE 151
            + K  +AIYGL Q+G+ W     D +   GFEQ +A+ C+F K+V+  V M++V+HVDD+L    D    E        RF  K+LG+ E++  C + R      LK+ Q  Y+ S+ + F ++ TSRI A  G     K D+ KA E
Sbjct:  448 IAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAGSDEDCEELLA-SFNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRFDVQWTSRIPASPGVDLGPKRDDEKAGE 594          
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: UPI000F102BE3 (hypothetical protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI000F102BE3)

HSP 1 Score: 94.0 bits (232), Expect = 2.710e-20
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 0
Query:    4 VCKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSR-ILAMSGAPALSKGDEPKAPEEKEEATKFP 160
            VCKL ++IYGLVQA + WNI F + + AFGF Q     C++ K V+G     ++++VDD+L    +    E  +  L   F +KDLG+A + +  ++ R R  R + L Q  Y+  I + F +E + +  L +     LSK   P    ++E+ +  P
Sbjct:   24 VCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACLY-KKVSGSSVAFLILYVDDILLMGNNIEMLESIKAYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGFLPVLQGMRLSKTQSPTTAADREKMSYVP 180          
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV)

HSP 1 Score: 98.2 bits (243), Expect = 4.370e-20
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 0
Query:    4 VCKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSR-ILAMSGAPALSKGDEPKAPEEKEEATKFP 160
            VCKL ++IYGLVQA + WNI F + + AFGF Q     CM+ K V+G     +V++VDD+L    D    E  +  L   F +KDLG+A + +  ++ R R  R + L Q  Y+  I + F +E + +  L +     LSK   P    ++E+ +  P
Sbjct:  947 VCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACMY-KKVSGSSVAFLVLYVDDILLMGNDIEMLESIKAYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGFLPVLQGMRLSKTQSPTTAADREKMSSVP 1103          
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: A0A453QJT9_AEGTS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453QJT9_AEGTS)

HSP 1 Score: 94.4 bits (233), Expect = 8.870e-20
Identity = 52/158 (32.91%), Postives = 86/158 (54.43%), Query Frame = 0
Query:    4 VCKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSR-ILAMSGAPALSKGDEPKAPEEKEEATKFP 160
            VCKL ++IYGLVQA + WNI F + + AFGF Q+    C++ K V+G     ++++VDD+L    D    E  +  L   F +KDLG+A + +  ++ R R  R + L Q  Y+  I + F ++++ +  L +     LS    P   E++E+ +  P
Sbjct:   33 VCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVY-KKVSGSSVAFLLLYVDDILLMGNDIEFLESIKAYLNKCFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMDQSKKGFLPVLQGVQLSTAQCPTTAEDREKMSVIP 189          
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 9.060e-20
Identity = 61/207 (29.47%), Postives = 97/207 (46.86%), Query Frame = 0
Query:    9 KAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSRILAMSGAPALSKGDEPKAPEEKEEATKFPCCGLSMETHTDLDFGACL-----------DTKRSVFGRVVLLAKGAISWHSRIQE 204
            +AIYGL Q+G+ W     D +   GFE  +A+ C+F K+V+G V M+VV++VDD+L    D    E     L  +F  K+LG+ E++  C + R  +   L++    Y+ S+ + F ++  SRI A  G     K D+ K  E   +        +S  +  D+     L           + KRSV G    + K  +S  S+ Q 
Sbjct:   19 RAIYGLKQSGRQWGYHAADTLVENGFEPCKADPCVFRKMVDGVVVMIVVIYVDDILVAGSDEDCEELLA-SLNKKFPTKNLGECEWFDGCAIERDFEAGTLRISHAAYIDSMVKRFDVQSASRIPASPGVDLGPKRDDMKGGEWPVKEAIGSMMWVSTFSRPDVSLAVRLAVYVDASYADTEDKRSVSGFATTVGKTVVSHGSKTQS 224          
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.020e-19
Identity = 51/148 (34.46%), Postives = 81/148 (54.73%), Query Frame = 0
Query:    4 VCKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSRILAMSGAPALSKGDEPKAPE 151
            + K  +AIYGL Q+G+ W     D +   GFEQ +A+ C+F K+V+  V M++V++VDD+L    D    E     L  +F  K+LG+ +++  C + R      L++ Q  Y+ S+ E F ++ TSRI A  GA    K ++ K  E
Sbjct:  469 IAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLA-SLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGE 615          
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: UPI001F50BB81 (hypothetical protein n=1 Tax=Ligilactobacillus salivarius TaxID=1624 RepID=UPI001F50BB81)

HSP 1 Score: 94.7 bits (234), Expect = 1.070e-19
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 0
Query:    4 VCKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSR-ILAMSGAPALSKGDEPKAPEEKEEATKFP 160
            VCKL ++IYGLVQA + WNI F + + AFGF Q     C++ K V+G     ++++VDD+L    +    E  +  L   F +KDLG+A + +  ++ R R  R + L Q  Y+  I + F +E + +  L +     LSK   P    ++E+ +  P
Sbjct:  117 VCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACLY-KKVSGSSVAFLILYVDDILLMGNNIEMLESIKAYLNKSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYLDKILKKFNMENSKKGFLPVLQGMRLSKTQSPTTAADREKMSSVP 273          
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: A0A6H5KL99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL99_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.070e-19
Identity = 55/171 (32.16%), Postives = 86/171 (50.29%), Query Frame = 0
Query:    4 VCKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSRILAMSGAPALSKGDEPKAPEEKEEATKFPCCGLSMETHTDLDF 174
            + K  +AIYGL Q+G+ W     D +   GFEQ +A+ C+F K+V+  V M++V++VDD+L    D    E     L  +F  K+LG+  +   C + R  +   LK+ Q  Y+ S+ + F ++ TSRI A  G     K D+ K  E      K     +S  +  D+ F
Sbjct:  860 IAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLA-SLNKKFPTKNLGECHWCDGCAIERDVEAGTLKISQTAYIDSMVKPFDVQSTSRIPASPGVDLGPKRDDEKGGEWPVREAKGSMTWVSTFSRPDVSF 1029          
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.480e-19
Identity = 49/143 (34.27%), Postives = 80/143 (55.94%), Query Frame = 0
Query:    4 VCKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNGEVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRVTRHRKGRELKLDQHMYVPSIAETFGIEKTSRILAMSGAPALSKGDE 146
            + K  +AIYGL Q+G+ W     D +   GFEQ +A+ C+F K+V+  V M++V++VDD+L    D    E     L  +F  K+LG+ +++  C + R  +   L++ Q  Y+ S+ E F ++ TSRI A  GA    K ++
Sbjct:  878 IAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLA-SLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED 1019          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig705.15011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N9HUJ9_FAGSY5.080e-2230.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1V1_9PHAE8.800e-2136.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000F102BE32.710e-2032.91hypothetical protein n=1 Tax=Klebsiella pneumoniae... [more]
A0A8I7BEN6_HORVV4.370e-2034.81Uncharacterized protein n=26 Tax=cellular organism... [more]
A0A453QJT9_AEGTS8.870e-2032.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L663_9PHAE9.060e-2029.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE1.020e-1934.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001F50BB811.070e-1932.91hypothetical protein n=1 Tax=Ligilactobacillus sal... [more]
A0A6H5KL99_9PHAE1.070e-1932.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE1.480e-1934.27Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..129
e-value: 8.9E-23
score: 81.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 4..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig705contigH-paniculata_contig705:29900..30714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig705.15011.1mRNA_H-paniculata_contig705.15011.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig705 29900..30714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig705.15011.1 ID=prot_H-paniculata_contig705.15011.1|Name=mRNA_H-paniculata_contig705.15011.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
PGAVCKLNKAIYGLVQAGQCWNIMFCDDMTAFGFEQSRANTCMFIKVVNG
EVEMVVVMHVDDVLAHAKDRATTEWFEIQLGGRFKLKDLGDAEFYMSCRV
TRHRKGRELKLDQHMYVPSIAETFGIEKTSRILAMSGAPALSKGDEPKAP
EEKEEATKFPCCGLSMETHTDLDFGACLDTKRSVFGRVVLLAKGAISWHS
RIQEITASGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2