prot_H-paniculata_contig7024.14973.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7024.14973.1
Unique Nameprot_H-paniculata_contig7024.14973.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length362
Homology
BLAST of mRNA_H-paniculata_contig7024.14973.1 vs. uniprot
Match: D8LAW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW7_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 2.080e-63
Identity = 195/402 (48.51%), Postives = 238/402 (59.20%), Query Frame = 0
Query:    1 MSGVDTMAFDENDPSLMSELAELGFDDDEMIG--------VANVSAGHRARPVSSAGGSDAHLGAQ-------DPGDLLKSLGVSLNSIGGDMLNESDLNDPSLLKELGDMSGGMDFANDDTMGMREGAYGVSEDSDSDDSDGVLPNEMEDGDTDDSGDDFDIGDIEEDLANDAEVCLYPSQPVTPQH------------------AEISRLENEAARLKQQAITFHKAGDQQGALEAMRNSKSAEQELSVLRKLAIAQQVATRTTEVVLPPQQQXXXXXXXXXXXXXXXXXXXXGGAGGKPVSAELLMKQVKILKQRAVELKKEGRQAEAVACLKRAKNLEADLLREAHDKGLVSDSGEGGELM------RKPSIMRQGT--SRRIGLAGTDEATVAAEAE 361
            MSGVDT+AFDENDPSLM+ELAELG+  D+           VA   AGHR RP ++ GG D  LG            DLL+SLG+SLNS+G   L E DL D  LL ELG++SGG +F         EG  G  E  D D  + V P + E        D   +G++EE+    A+  L P QP +                      E++RLE E   L+ +A+   KAGD+ GALEAMR ++SA+ EL+V+R L  A++VAT  TE V PP  +XXXXXXXXXXXXXXXXXXXX     KPVSAEL+MKQVKIL QRA+ELKKEGR+AEA+ACLKRAK+LEADL REA  KGLV  S E           ++PS +RQ +  SRR  LA  D    AA AE
Sbjct:   40 MSGVDTVAFDENDPSLMAELAELGWGGDDSXXXXXXXXATVARPPAGHRPRPDAAPGG-DGGLGPSAAPRREASGNDLLRSLGLSLNSLGDQELTEDDLQDADLLGELGEVSGGAEFDAAAPTNTAEGETG-GEYEDDDXXEAVEP-DRESXXXXXEEDMLALGELEEEPMVPAKPALPPRQPASXXXXXXXXXXXXXXXXXXAATGEMARLEQELEILRHRALELKKAGDRAGALEAMRAARSADHELAVMRTLETARKVATVRTEYVPPPSDEXXXXXXXXXXXXXXXXXXXX---XXKPVSAELVMKQVKILYQRAIELKKEGRKAEAMACLKRAKSLEADLRREAQGKGLVGSSEETXXXXXXXXXGKRPSFVRQASARSRRSSLAAADAPPSAARAE 435          
BLAST of mRNA_H-paniculata_contig7024.14973.1 vs. uniprot
Match: A0A6H5JQ36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ36_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 1.440e-59
Identity = 197/422 (46.68%), Postives = 241/422 (57.11%), Query Frame = 0
Query:    1 MSGVDTMAFDENDPSLMSELAELGFDDDEMIG--------VANVSAGHRARPVSSAGGSDAHLGAQ-------DPGDLLKSLGVSLNSIGGDMLNESDLNDPSLLKELGDMSGGMDFANDDTMGMREGAYGVSEDSDSDDSDGVLPNEMEDGDTDDSGDDFDIGDIEEDLA---------------------------------------NDAEVCLYPSQPVTPQHAEISRLENEAARLKQQAITFHKAGDQQGALEAMRNSKSAEQELSVLRKLAIAQQVATRTTEVVLPPQQQXXXXXXXXXXXXXXXXXXXXGGAGGKPVSAELLMKQVKILKQRAVELKKEGRQAEAVACLKRAKNLEADLLREAHDKGLVS-----DSGEGGELMRKPSIMRQGT--SRRIGLAGTDEATVAAEAE 361
            MSGVDT+AFDENDPSLM+ELAELG+  D+           VA   AGHR RP ++ GG D  LG            DLL+SLG+SLNS+G   L E DL DP LL ELG++SGG DF         EG  G  E +D DD + V P + E G   +  D   +G++EE                                          +D           T    E++RLE E   L+ +A+   KAGD+ GALEAMR ++SA  EL+V+R L  A++VAT  TE V PP  +XXXXXXXXXXXXXXXXXXXX     KPVSAEL+MKQVK+L QRA+ELKKEGR+AEA+ACLKRAK+LEADL REA  KGLV      ++GEGG   ++PS +RQ +  SRR  LA  D    AA AE
Sbjct:   40 MSGVDTIAFDENDPSLMAELAELGWGGDDSXXXXXXXXATVARPPAGHRPRPDAAPGG-DGGLGPSAAPQREASGNDLLRSLGLSLNSLGDQELTEDDLQDPDLLGELGEVSGGADFDVAAPTNTTEGETG-GEYADDDDDEAVEP-DRESGSEVEEEDMLALGELEEHAVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGGGAXXXXXAAT---GEMARLEQELEVLRHRALELKKAGDRAGALEAMRAARSANHELAVMRTLETARKVATVRTEYVPPPSDEXXXXXXXXXXXXXXXXXXXX---XXKPVSAELVMKQVKVLYQRAIELKKEGRKAEAMACLKRAKSLEADLRREAQGKGLVGSLEEEETGEGGCEGKRPSFVRQASARSRRSSLAAADAPPSAARAE 452          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7024.14973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAW7_ECTSI2.080e-6348.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQ36_9PHAE1.440e-5946.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 272..299
NoneNo IPR availableCOILSCoilCoilcoord: 176..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7024contigH-paniculata_contig7024:541..6199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7024.14973.1mRNA_H-paniculata_contig7024.14973.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7024 541..6205 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7024.14973.1 ID=prot_H-paniculata_contig7024.14973.1|Name=mRNA_H-paniculata_contig7024.14973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=362bp
MSGVDTMAFDENDPSLMSELAELGFDDDEMIGVANVSAGHRARPVSSAGG
SDAHLGAQDPGDLLKSLGVSLNSIGGDMLNESDLNDPSLLKELGDMSGGM
DFANDDTMGMREGAYGVSEDSDSDDSDGVLPNEMEDGDTDDSGDDFDIGD
IEEDLANDAEVCLYPSQPVTPQHAEISRLENEAARLKQQAITFHKAGDQQ
GALEAMRNSKSAEQELSVLRKLAIAQQVATRTTEVVLPPQQQEEEEAPAP
LPSPSPAGAGAAGGAGGKPVSAELLMKQVKILKQRAVELKKEGRQAEAVA
CLKRAKNLEADLLREAHDKGLVSDSGEGGELMRKPSIMRQGTSRRIGLAG
TDEATVAAEAEA
back to top