prot_H-paniculata_contig7017.14967.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7017.14967.1
Unique Nameprot_H-paniculata_contig7017.14967.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length297
Homology
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BLAST of mRNA_H-paniculata_contig7017.14967.1 vs. uniprot
Match: A0A6H5KKN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 9.010e-9
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:   95 MLQILFAVFEDLQELRETSDMKGSKAGTMILGYINSIEGIGQQVTGFARSKLQTRLLLSKTLSLCFDMVRGGHCRLAKDYP 175
            M+ IL A+F DL+E   T+  +       +LG+I  I+ IGQ VT F  S+LQT  L+S T+ LC  M    H +LAKDYP
Sbjct:    1 MVGILAALFNDLEERYSTTYGQDPVVDDAVLGFIQRIKDIGQGVTVFTVSRLQTHSLISNTVQLCHRMAGDQHSQLAKDYP 81
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BLAST of mRNA_H-paniculata_contig7017.14967.1 vs. uniprot
Match: D8LPY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY0_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 2.580e-8
Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:   95 MLQILFAVFEDLQELRETSDMKGSKAGTMILGYINSIEGIGQQVTGFARSKLQTRLLLSKTLSLCFDMVRGGHCRLAKDYP 175
            M+ IL A+F DL+E   T+  +       +LG+I  I+ IGQ +T F  S+LQT  L+S T+ LC  M    H +LAKDYP
Sbjct:    1 MVGILAALFNDLEERYSTTYGQDPVVDDAVLGFIQRIKDIGQGMTVFTVSRLQTHSLISNTVQLCHRMAGDQHSQLAKDYP 81
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7017.14967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKN9_9PHAE9.010e-944.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPY0_ECTSI2.580e-843.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7017contigH-paniculata_contig7017:2973..9294 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7017.14967.1mRNA_H-paniculata_contig7017.14967.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7017 2078..9294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7017.14967.1 ID=prot_H-paniculata_contig7017.14967.1|Name=mRNA_H-paniculata_contig7017.14967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MSSLASTGARRGRRRKQSSEQRARRTASAQPARSKQSVEASEGSDDDGDA
SVIGAGGSADEATSKKHGAEQTVKSTQPNHAPNDDNWNSIIHTAMLQILF
AVFEDLQELRETSDMKGSKAGTMILGYINSIEGIGQQVTGFARSKLQTRL
LLSKTLSLCFDMVRGGHCRLAKDYPREYGCEDNLRQGDSDFDYDFTTTDS
NSGEWDVEESDDDGDDFWKDEGRGVARRRSTGSGSSGAEKQVGGRVSNRK
MKNIKAKLPKGKGKPQTGKRDGKTEAKTTGKHKGSRAGAEKRNDKVV
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