prot_H-paniculata_contig7014.14963.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7014.14963.1
Unique Nameprot_H-paniculata_contig7014.14963.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length133
Homology
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BLAST of mRNA_H-paniculata_contig7014.14963.1 vs. uniprot
Match: D8LGV0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGV0_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.970e-6
Identity = 40/129 (31.01%), Postives = 62/129 (48.06%), Query Frame = 0 
Query:    1 MVFRISSMVGIVAGIVSLMAPTYAQNGKVIYCDVNENAVPKTFKTKLASPEDFEERFPNYPVLPSDVMMGRCGEFVGEICDDQVFCTMDYVALSPEDAAIAAEEAGDGEEPAVYKCLSFPREIMTGCVQ 129
            M FR+ S++     +  +MA   +    +  C V+ ++   +F+T  A+  + E    NYP    D + G C EF+G++CDD + CTMD+                D EE    KCL  PRE+M  CV+
Sbjct:    1 MAFRVCSVL-----LALVMAVAASAETLIPLCVVSADS---SFETLHATAAEAE----NYP----DALEGPCNEFLGQLCDDSLKCTMDF----------------DYEE---VKCLPEPREVMDSCVE 94
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7014.14963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGV0_ECTSI1.970e-631.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..132
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.692

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7014contigH-paniculata_contig7014:7934..8904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7014.14963.1mRNA_H-paniculata_contig7014.14963.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7014 4462..10691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7014.14963.1 ID=prot_H-paniculata_contig7014.14963.1|Name=mRNA_H-paniculata_contig7014.14963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp
MVFRISSMVGIVAGIVSLMAPTYAQNGKVIYCDVNENAVPKTFKTKLASP
EDFEERFPNYPVLPSDVMMGRCGEFVGEICDDQVFCTMDYVALSPEDAAI
AAEEAGDGEEPAVYKCLSFPREIMTGCVQPAM*
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